FFCP PHASE1:Hg19::chr1:32403130..32403147,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:32403130..32403147,- | |||
|coexpression_cluster_id=C580 | |||
|description=CAGE_peak_at_chr1:32403130..32403147,- | |description=CAGE_peak_at_chr1:32403130..32403147,- | ||
|id=chr1:32403130..32403147,- | |id=chr1:32403130..32403147,- | ||
|ontology_enrichment_celltype=CL:0000738!6.78e-08!140;CL:0002057!3.51e-07!42;CL:0002031!4.00e-07!124 | |ontology_enrichment_celltype=CL:0000738!6.78e-08!140;CL:0002057!3.51e-07!42;CL:0002031!4.00e-07!124 | ||
|ontology_enrichment_celltype_v019=CL:0000771;2.35e-11;2!CL:0001014;3.52e-11;2!CL:0001016;3.52e-11;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000771,2.23e-11,2;CL:0001014,3.35e-11,2;CL:0001016,3.35e-11,2;CL:0000738,7.87e-07,136 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;6.62e-41;2!UBERON:0005058;6.62e-41;2!UBERON:0009113;6.62e-41;2!UBERON:0004177;4.83e-17;5!UBERON:0005057;4.83e-17;5!UBERON:0001905;3.52e-11;2!UBERON:0002757;3.52e-11;2!UBERON:0010134;3.52e-11;2!UBERON:0005408;3.52e-11;2!UBERON:0001899;3.52e-11;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,5.17e-21,4;UBERON:0005058,5.17e-21,4;UBERON:0009113,5.17e-21,4;UBERON:0003295,5.17e-21,4;UBERON:0005562,5.17e-21,4;UBERON:0003351,2.33e-14,6;UBERON:0004177,1.89e-12,7;UBERON:0005057,1.89e-12,7;UBERON:0001905,4.09e-11,2;UBERON:0002757,4.09e-11,2;UBERON:0010134,4.09e-11,2;UBERON:0005408,4.09e-11,2;UBERON:0001899,4.09e-11,2;UBERON:0000974,5.36e-09,10;UBERON:0003408,5.36e-09,10;UBERON:0001042,5.36e-09,10;UBERON:0009145,5.36e-09,10;UBERON:0006562,2.92e-08,11;UBERON:0009722,2.92e-08,11;UBERON:0007690,2.92e-08,11;UBERON:0002405,1.65e-07,93;UBERON:0002390,4.04e-07,98;UBERON:0003061,4.04e-07,98 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0.672325146451775,0.602694528023977,0,0,0,0,0,0,0,0,0.152826811495903,0.0821005894499457,0,0,0,0,0,0,0,0.154934401160603,0,0,0,0.200544447470142,0.434021741431704,0,0,0,0,0,0,0,0.411167888021826,0,0.28769239232215,0,0,1.37898272294647,0,0,0,0.272906150057846,0.224723484445085,0.306083892370903,0,0.639337125799041,0.329851300186716,0,0,0.290209238628584,0,0,0,1.0429658368404,0.217188844705117,0.605399502633369,0,0,0.211255286311942,0.212604299965044,0,0.336985893439485,0,0.16072558669708,0.570025487482497,0.19891667719909,0.730656615058536,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0,0,0.196709770113833,0.786021525498329,0,0,0,0,0,0,0,0,0.270803863765016,0,0.260118695119756,0.164437904603676,0,0,0.14828656316206,0,0,0,0,0,0.253019692019503,0,0,0,0.150575119077773,0.127986611154418,0,0,0,0.201606743224732,0,0.579297615531196,0,0,0,0.361439152384566,0,0.434539556882471,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0.103052529238439,0,0,0,0.194874010322397,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0.168584690078102,0,0.110293972732394,0.217879444092406,0.237270619111097,0,0,0,0,0,0,0,0,0,0,1.32438929824395,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47798971368783,0.088048434013226,0.207328115540772,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0.112085143993527,0.197030760201927,0.215627574859517,0.128343036279748,0,0,0,0,0,0,0,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0.260650843404249,0,0,0.206768026122887,0.215714200818617,0.106727557803444,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0.116210378459959,0.120859449591622,0,0,0.114814448164607,0.182091168006717,0.393373244878272,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0.522870902049801,0,0,0,0,0,0,0,0,0,0.193341436584244,0.308097234229289,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0.31481234683064,0,0.308033580176089,0,0,0.18532421910392,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0.136499911407986,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0.411362273086194,0,0,0,0,0,0,0,0,0.782560276832555,0.478278818186467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0.222617410045812,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0.0986434056369336,0,0,0,0.278304294485554,0,0,0.524759999977174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0,0,0,5.10966490978682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593042257361244,0,0,0.202203398942031,0,0,0,0,0.485560759068186,0.394584402849391,0,0,0.063186579628488,0,0,0,0.661983911750998,0.627865836814451,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,0.264768380074501,0,0,0,0.189932387867636,0,0.0801588202515337,0,0,0,0.114536596165916,0,0,0.124252535565433,0.235694034616795,0,0.104602846312333,0.101998217636322,0,0,0.136905378891993,0,0,0,0.279282401272254,0,0,0.199679000498991,0,0.446342914883745,0.0671834724867263,0,0,0,0,0,0,0.0846733320657845,0,0.136203406111576,0,0,0,1.349843349309,0,0,0,0,0,0.105600336519406,0.537862017998534,0,0,0,0,0,0.864221491201268,0,0,0.164185041498678,0.170388021785422,0,0.146552233678082,0,0.129282956361551,0.13223260174269,0.171086837884329,0,0.106787412567695,0.157204305099666,0.414239055347196,0,0,0.243585196761792,0,0.544017803369474,0,0.612691153526923,0,0,0,0.122026264901963,0,0,0.110929051536852,0,0,0.124980407962107,0,0,0.470531639396343,0,0,0.149254802886874,0,0,0.189403005275089,0.251567901752575,0,0.228840068396924,0.302461847526478,0,0.147855149989634,0.159296767163702,0,0.155262956876259,0.829412415681711,0.265841714557995,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0.226705925512272,0,0,0,0,0.438568099157414,0,0.38582807654183,0,0.256241518587947,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0.212574920101683,0,0,0,0.0788617450012534,0,0.352675943690684,0,0,0,0.159633859057151,0,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0.198916222116275,0,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0,0,1.07140367175657,0,0,0,0,0.230467975111559,0.342976018874837,0.203909198930495,0.131545547125698,0.709163045303809,0,0.078493092850514,0,0,0,0,0.9555033757741,0,0,0,0,0,0,0,0.691259661814092,0,0,0,0,0.4582137370881,0.31020638566432,0,0,0,0,0,0.102662806856247,0,0,0.233939463462106,0.397901550322736,0,0,0.219881033490858,0,0,0,0,0,0,0.392616934229891,0,0,0,0,0.0644578879735772,0.299823467774787,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0.23806443146374,3.55239004098034,2.48298857183432,0,0,0,0,0,0,0,0,0.0814032686109745,0.213454691755431,0,0.0898252021065869,0,0,0,0,0.201273793591026,0 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|phase1_expression=0,0.214100523890983,0,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0.672325146451775,0.602694528023977,0,0,0,0,0,0,0,0,0.152826811495903,0.0821005894499457,0,0,0,0,0,0,0,0.154934401160603,0,0,0,0.200544447470142,0.434021741431704,0,0,0,0,0,0,0,0.411167888021826,0,0.28769239232215,0,0,1.37898272294647,0,0,0,0.272906150057846,0.224723484445085,0.306083892370903,0,0.639337125799041,0.329851300186716,0,0,0.290209238628584,0,0,0,1.0429658368404,0.217188844705117,0.605399502633369,0,0,0.211255286311942,0.212604299965044,0,0.336985893439485,0,0.16072558669708,0.570025487482497,0.19891667719909,0.730656615058536,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0,0,0.196709770113833,0.786021525498329,0,0,0,0,0,0,0,0,0.270803863765016,0,0.260118695119756,0.164437904603676,0,0,0.14828656316206,0,0,0,0,0,0.253019692019503,0,0,0,0.150575119077773,0.127986611154418,0,0,0,0.201606743224732,0,0.579297615531196,0,0,0,0.361439152384566,0,0.434539556882471,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0.103052529238439,0,0,0,0.194874010322397,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0.168584690078102,0,0.110293972732394,0.217879444092406,0.237270619111097,0,0,0,0,0,0,0,0,0,0,1.32438929824395,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47798971368783,0.088048434013226,0.207328115540772,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0.112085143993527,0.197030760201927,0.215627574859517,0.128343036279748,0,0,0,0,0,0,0,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0.260650843404249,0,0,0.206768026122887,0.215714200818617,0.106727557803444,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0.116210378459959,0.120859449591622,0,0,0.114814448164607,0.182091168006717,0.393373244878272,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0.522870902049801,0,0,0,0,0,0,0,0,0,0.193341436584244,0.308097234229289,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0.31481234683064,0,0.308033580176089,0,0,0.18532421910392,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0.136499911407986,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0.411362273086194,0,0,0,0,0,0,0,0,0.782560276832555,0.478278818186467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0.222617410045812,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0.0986434056369336,0,0,0,0.278304294485554,0,0,0.524759999977174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0,0,0,5.10966490978682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593042257361244,0,0,0.202203398942031,0,0,0,0,0.485560759068186,0.394584402849391,0,0,0.063186579628488,0,0,0,0.661983911750998,0.627865836814451,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,0.264768380074501,0,0,0,0.189932387867636,0,0.0801588202515337,0,0,0,0.114536596165916,0,0,0.124252535565433,0.235694034616795,0,0.104602846312333,0.101998217636322,0,0,0.136905378891993,0,0,0,0.279282401272254,0,0,0.199679000498991,0,0.446342914883745,0.0671834724867263,0,0,0,0,0,0,0.0846733320657845,0,0.136203406111576,0,0,0,1.349843349309,0,0,0,0,0,0.105600336519406,0.537862017998534,0,0,0,0,0,0.864221491201268,0,0,0.164185041498678,0.170388021785422,0,0.146552233678082,0,0.129282956361551,0.13223260174269,0.171086837884329,0,0.106787412567695,0.157204305099666,0.414239055347196,0,0,0.243585196761792,0,0.544017803369474,0,0.612691153526923,0,0,0,0.122026264901963,0,0,0.110929051536852,0,0,0.124980407962107,0,0,0.470531639396343,0,0,0.149254802886874,0,0,0.189403005275089,0.251567901752575,0,0.228840068396924,0.302461847526478,0,0.147855149989634,0.159296767163702,0,0.155262956876259,0.829412415681711,0.265841714557995,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0.226705925512272,0,0,0,0,0.438568099157414,0,0.38582807654183,0,0.256241518587947,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0.212574920101683,0,0,0,0.0788617450012534,0,0.352675943690684,0,0,0,0.159633859057151,0,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0.198916222116275,0,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0,0,1.07140367175657,0,0,0,0,0.230467975111559,0.342976018874837,0.203909198930495,0.131545547125698,0.709163045303809,0,0.078493092850514,0,0,0,0,0.9555033757741,0,0,0,0,0,0,0,0.691259661814092,0,0,0,0,0.4582137370881,0.31020638566432,0,0,0,0,0,0.102662806856247,0,0,0.233939463462106,0.397901550322736,0,0,0.219881033490858,0,0,0,0,0,0,0.392616934229891,0,0,0,0,0.0644578879735772,0.299823467774787,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0.23806443146374,3.55239004098034,2.48298857183432,0,0,0,0,0,0,0,0,0.0814032686109745,0.213454691755431,0,0.0898252021065869,0,0,0,0,0.201273793591026,0 | ||
|short_description=p@chr1:32403130..32403147,- | |short_description=p@chr1:32403130..32403147,- | ||
}} | }} |
Latest revision as of 07:15, 28 July 2015
Short description: | p@chr1:32403130..32403147, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:32403130..32403147, - |
Coexpression cluster: | C580_chronic_thymus_Hodgkin_acute_iPS_vein_Burkitt |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eosinophil | 2.23e-11 | 2 |
CD1a-positive Langerhans cell | 3.35e-11 | 2 |
immature CD1a-positive Langerhans cell | 3.35e-11 | 2 |
leukocyte | 7.87e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
thymus | 5.17e-21 | 4 |
hemolymphoid system gland | 5.17e-21 | 4 |
thymic region | 5.17e-21 | 4 |
pharyngeal gland | 5.17e-21 | 4 |
thymus primordium | 5.17e-21 | 4 |
pharyngeal epithelium | 2.33e-14 | 6 |
hemopoietic organ | 1.89e-12 | 7 |
immune organ | 1.89e-12 | 7 |
pineal body | 4.09e-11 | 2 |
regional part of epithalamus | 4.09e-11 | 2 |
secretory circumventricular organ | 4.09e-11 | 2 |
circumventricular organ | 4.09e-11 | 2 |
epithalamus | 4.09e-11 | 2 |
neck | 5.36e-09 | 10 |
gland of gut | 5.36e-09 | 10 |
chordate pharynx | 5.36e-09 | 10 |
pharyngeal region of foregut | 5.36e-09 | 10 |
pharynx | 2.92e-08 | 11 |
entire pharyngeal arch endoderm | 2.92e-08 | 11 |
early pharyngeal endoderm | 2.92e-08 | 11 |
immune system | 1.65e-07 | 93 |
hematopoietic system | 4.04e-07 | 98 |
blood island | 4.04e-07 | 98 |