FFCP PHASE1:Hg19::chr20:20069105..20069117,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:20069105..20069117,- | |||
|coexpression_cluster_id=C2608 | |||
|description=CAGE_peak_at_chr20:20069105..20069117,- | |description=CAGE_peak_at_chr20:20069105..20069117,- | ||
|id=chr20:20069105..20069117,- | |id=chr20:20069105..20069117,- | ||
|ontology_enrichment_celltype=CL:0000148!3.46e-31!10;CL:0000541!3.46e-31!10;CL:0000147!2.64e-22!14;CL:0002567!1.08e-17!3;CL:0000710!1.27e-15!20;CL:0002566!3.98e-14!1;CL:0000075!1.45e-11!27;CL:0002077!1.89e-09!33;CL:0000325!5.55e-08!39;CL:0000333!3.14e-07!41 | |ontology_enrichment_celltype=CL:0000148!3.46e-31!10;CL:0000541!3.46e-31!10;CL:0000147!2.64e-22!14;CL:0002567!1.08e-17!3;CL:0000710!1.27e-15!20;CL:0002566!3.98e-14!1;CL:0000075!1.45e-11!27;CL:0002077!1.89e-09!33;CL:0000325!5.55e-08!39;CL:0000333!3.14e-07!41 | ||
|ontology_enrichment_celltype_v019=CL:0002566;1.33e-29;1!CL:0000148;5.30e-26;10!CL:0000147;8.02e-19;14!CL:0000710;2.05e-13;20!CL:0002567;9.90e-11;3!CL:0000075;3.99e-10;27!CL:0002077;7.85e-08;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0002566,1.33e-29,1;CL:0000148,5.53e-26,10;CL:0000541,5.53e-26,10;CL:0000147,8.27e-19,14;CL:0000710,2.10e-13,20;CL:0002567,9.90e-11,3;CL:0000075,4.06e-10,27;CL:0002077,3.58e-08,34 | |||
|ontology_enrichment_development_v019=UBERON:0010226;3.64e-29;1 | |||
|ontology_enrichment_disease=DOID:114!4.08e-26!2;DOID:178!7.55e-14!1;DOID:326!7.55e-14!1;DOID:3978!7.55e-14!1;DOID:3394!7.55e-14!1;DOID:5844!7.55e-14!1;DOID:1287!1.43e-13!4;DOID:1909!1.64e-07!2 | |ontology_enrichment_disease=DOID:114!4.08e-26!2;DOID:178!7.55e-14!1;DOID:326!7.55e-14!1;DOID:3978!7.55e-14!1;DOID:3394!7.55e-14!1;DOID:5844!7.55e-14!1;DOID:1287!1.43e-13!4;DOID:1909!1.64e-07!2 | ||
|ontology_enrichment_disease_v019=DOID:114;1.78e-15;2!DOID:1287;2.11e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.78e-15,2;DOID:1287,2.11e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0005418!3.50e-14!1;UBERON:0001389!3.50e-14!1;UBERON:0000026!3.50e-14!1;UBERON:0008784!3.50e-14!1;UBERON:0006058!3.50e-14!1;UBERON:0003663!3.50e-14!1;UBERON:0001383!3.50e-14!1;UBERON:0004256!3.50e-14!1;UBERON:0002529!3.50e-14!1;UBERON:0004708!3.50e-14!1;UBERON:0002101!3.50e-14!1;UBERON:0004709!3.50e-14!1;UBERON:0003661!3.50e-14!1;UBERON:0002471!3.50e-14!1;UBERON:0004357!3.50e-14!1;UBERON:0009872!3.50e-14!1;UBERON:0004347!3.50e-14!1;UBERON:0005420!3.50e-14!1;UBERON:0005732!3.50e-14!1;UBERON:0006057!3.50e-14!1;UBERON:0000978!3.50e-14!1;UBERON:0002103!3.50e-14!1;UBERON:0001665!3.50e-14!1;UBERON:0003823!3.50e-14!1;UBERON:0000154!3.50e-14!1;UBERON:0005733!3.50e-14!1;UBERON:0005730!3.50e-14!1;UBERON:0002084!5.85e-14!1;UBERON:0002082!5.85e-14!1;UBERON:0004706!5.85e-14!1;UBERON:0007100!1.77e-11!27;UBERON:0007023!9.45e-08!115;UBERON:0001630!9.87e-08!2;UBERON:0005090!9.87e-08!2;UBERON:0000341!1.99e-07!2 | |ontology_enrichment_uberon=UBERON:0005418!3.50e-14!1;UBERON:0001389!3.50e-14!1;UBERON:0000026!3.50e-14!1;UBERON:0008784!3.50e-14!1;UBERON:0006058!3.50e-14!1;UBERON:0003663!3.50e-14!1;UBERON:0001383!3.50e-14!1;UBERON:0004256!3.50e-14!1;UBERON:0002529!3.50e-14!1;UBERON:0004708!3.50e-14!1;UBERON:0002101!3.50e-14!1;UBERON:0004709!3.50e-14!1;UBERON:0003661!3.50e-14!1;UBERON:0002471!3.50e-14!1;UBERON:0004357!3.50e-14!1;UBERON:0009872!3.50e-14!1;UBERON:0004347!3.50e-14!1;UBERON:0005420!3.50e-14!1;UBERON:0005732!3.50e-14!1;UBERON:0006057!3.50e-14!1;UBERON:0000978!3.50e-14!1;UBERON:0002103!3.50e-14!1;UBERON:0001665!3.50e-14!1;UBERON:0003823!3.50e-14!1;UBERON:0000154!3.50e-14!1;UBERON:0005733!3.50e-14!1;UBERON:0005730!3.50e-14!1;UBERON:0002084!5.85e-14!1;UBERON:0002082!5.85e-14!1;UBERON:0004706!5.85e-14!1;UBERON:0007100!1.77e-11!27;UBERON:0007023!9.45e-08!115;UBERON:0001630!9.87e-08!2;UBERON:0005090!9.87e-08!2;UBERON:0000341!1.99e-07!2 | ||
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|short_description=p@chr20:20069105..20069117,- | |short_description=p@chr20:20069105..20069117,- | ||
}} | }} |
Latest revision as of 12:20, 28 July 2015
Short description: | p@chr20:20069105..20069117, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:20069105..20069117, - |
Coexpression cluster: | C2608_Melanocyte_heart_skeletal_melanoma_left_umbilical_carcinoid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
dark melanocyte | 1.33e-29 | 1 |
melanocyte | 5.53e-26 | 10 |
melanoblast | 5.53e-26 | 10 |
pigment cell | 8.27e-19 | 14 |
neurecto-epithelial cell | 2.10e-13 | 20 |
light melanocyte | 9.90e-11 | 3 |
columnar/cuboidal epithelial cell | 4.06e-10 | 27 |
ecto-epithelial cell | 3.58e-08 | 34 |
Ontology term | p-value | n |
---|---|---|
hindlimb bud | 9.99e-30 | 1 |
soleus muscle | 9.99e-30 | 1 |
appendage | 9.99e-30 | 1 |
lower limb segment | 9.99e-30 | 1 |
multi-limb segment region | 9.99e-30 | 1 |
hindlimb muscle | 9.99e-30 | 1 |
hindlimb zeugopod muscle | 9.99e-30 | 1 |
paired limb/fin | 9.99e-30 | 1 |
limb | 9.99e-30 | 1 |
pelvic appendage | 9.99e-30 | 1 |
limb segment | 9.99e-30 | 1 |
paired limb/fin segment | 9.99e-30 | 1 |
limb muscle | 9.99e-30 | 1 |
pelvic complex muscle | 9.99e-30 | 1 |
zeugopod | 9.99e-30 | 1 |
muscle of leg | 9.99e-30 | 1 |
paired limb/fin bud | 9.99e-30 | 1 |
limb bud | 9.99e-30 | 1 |
pelvic appendage bud | 9.99e-30 | 1 |
limb/fin field | 9.99e-30 | 1 |
subdivision of organism along appendicular axis | 9.99e-30 | 1 |
appendage girdle complex | 9.99e-30 | 1 |
leg | 9.99e-30 | 1 |
hindlimb | 9.99e-30 | 1 |
triceps surae | 9.99e-30 | 1 |
hindlimb zeugopod | 9.99e-30 | 1 |
posterior region of body | 9.99e-30 | 1 |
pelvic complex | 9.99e-30 | 1 |
limb field | 9.99e-30 | 1 |
hindlimb/pelvic fin field | 9.99e-30 | 1 |
heart left ventricle | 3.16e-29 | 1 |
cardiac ventricle | 3.16e-29 | 1 |
future cardiac ventricle | 3.16e-29 | 1 |
muscle structure | 1.33e-15 | 2 |
muscle organ | 1.33e-15 | 2 |
cardiac chamber | 1.09e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
heart disease | 1.78e-15 | 2 |
cardiovascular system disease | 2.11e-08 | 4 |