FFCP PHASE1:Hg19::chr6:16238704..16238715,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2766 | |EntrezGene=2766 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4376 | |HGNC=4376 | ||
|TSSclassifier=strong | |||
|UniProt=P36959 | |UniProt=P36959 | ||
|association_with_transcript=-95bp_to_ENST00000259727,NM_006877,uc003nbs.2_5end | |association_with_transcript=-95bp_to_ENST00000259727,NM_006877,uc003nbs.2_5end | ||
|cluster_id=chr6:16238704..16238715,+ | |||
|coexpression_cluster_id=C14 | |||
|description=CAGE_peak_4_at_GMPR_5end | |description=CAGE_peak_4_at_GMPR_5end | ||
|id=chr6:16238704..16238715,+ | |id=chr6:16238704..16238715,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000764;1.32e-14;2!CL:0000558;1.32e-14;2!CL:0002032;8.98e-08;1!CL:0000557;8.98e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,1.20e-14,2;CL:0000765,1.20e-14,2;CL:0000050,1.20e-14,2;CL:0000038,1.20e-14,2;CL:0000558,1.20e-14,2;CL:0000547,1.20e-14,2;CL:0000549,1.20e-14,2;CL:0000550,1.20e-14,2;CL:0000552,1.20e-14,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1036!2.97e-07!8 | |||
|ontology_enrichment_disease_v019=DOID:8692;2.68e-09;31!DOID:1036;3.84e-08;8!DOID:8552;5.40e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,1.07e-09,31;DOID:1036,4.24e-08,8;DOID:8552,6.19e-08,1;DOID:1240,1.54e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.26e-27!115;UBERON:0000178!1.80e-08!15;UBERON:0000179!1.80e-08!15;UBERON:0000463!1.80e-08!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.41e-36;15!UBERON:0000179;2.41e-36;15!UBERON:0000463;2.41e-36;15!UBERON:0002390;1.27e-22;32!UBERON:0002193;1.11e-11;42!UBERON:0001389;5.40e-08;1!UBERON:0000026;5.40e-08;1!UBERON:0008784;5.40e-08;1!UBERON:0006058;5.40e-08;1!UBERON:0003663;5.40e-08;1!UBERON:0004256;5.40e-08;1!UBERON:0004708;5.40e-08;1!UBERON:0002101;5.40e-08;1!UBERON:0004709;5.40e-08;1!UBERON:0002529;5.40e-08;1!UBERON:0010538;5.40e-08;1!UBERON:0003661;5.40e-08;1!UBERON:0010890;5.40e-08;1!UBERON:0002471;5.40e-08;1!UBERON:0001383;5.40e-08;1!UBERON:0010758;5.40e-08;1!UBERON:0010707;5.40e-08;1!UBERON:0000978;5.40e-08;1!UBERON:0002103;5.40e-08;1!UBERON:0001665;5.40e-08;1!UBERON:0003823;5.40e-08;1!UBERON:0000154;5.40e-08;1!UBERON:0010709;5.40e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.51e-36,15;UBERON:0000179,2.51e-36,15;UBERON:0000463,2.51e-36,15;UBERON:0007023,4.43e-12,114;UBERON:0005418,5.40e-08,1;UBERON:0001389,5.40e-08,1;UBERON:0000026,5.40e-08,1;UBERON:0008784,5.40e-08,1;UBERON:0006058,5.40e-08,1;UBERON:0003663,5.40e-08,1;UBERON:0004256,5.40e-08,1;UBERON:0004708,5.40e-08,1;UBERON:0002101,5.40e-08,1;UBERON:0004709,5.40e-08,1;UBERON:0002529,5.40e-08,1;UBERON:0010538,5.40e-08,1;UBERON:0003661,5.40e-08,1;UBERON:0010890,5.40e-08,1;UBERON:0002471,5.40e-08,1;UBERON:0001383,5.40e-08,1;UBERON:0004357,5.40e-08,1;UBERON:0004347,5.40e-08,1;UBERON:0005420,5.40e-08,1;UBERON:0005732,5.40e-08,1;UBERON:0010758,5.40e-08,1;UBERON:0010707,5.40e-08,1;UBERON:0000978,5.40e-08,1;UBERON:0002103,5.40e-08,1;UBERON:0001665,5.40e-08,1;UBERON:0003823,5.40e-08,1;UBERON:0000154,5.40e-08,1;UBERON:0010709,5.40e-08,1;UBERON:0005733,5.40e-08,1;UBERON:0005730,5.40e-08,1;UBERON:0002390,1.08e-07,98;UBERON:0003061,1.08e-07,98;UBERON:0002193,8.67e-07,108 | |||
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| ||
|short_description=p4@GMPR | |short_description=p4@GMPR | ||
}} | }} |
Latest revision as of 17:32, 16 September 2015
Short description: | p4@GMPR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_GMPR_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | -95bp_to_ENST00000259727, NM_006877, uc003nbs.2_5end |
EntrezGene: | GMPR |
HGNC: | 4376 |
UniProt: | P36959 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 1.20e-14 | 2 |
erythroblast | 1.20e-14 | 2 |
megakaryocyte-erythroid progenitor cell | 1.20e-14 | 2 |
erythroid progenitor cell | 1.20e-14 | 2 |
reticulocyte | 1.20e-14 | 2 |
proerythroblast | 1.20e-14 | 2 |
basophilic erythroblast | 1.20e-14 | 2 |
polychromatophilic erythroblast | 1.20e-14 | 2 |
orthochromatic erythroblast | 1.20e-14 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 2.51e-36 | 15 |
haemolymphatic fluid | 2.51e-36 | 15 |
organism substance | 2.51e-36 | 15 |
adult organism | 4.43e-12 | 114 |
hindlimb bud | 5.40e-08 | 1 |
soleus muscle | 5.40e-08 | 1 |
appendage | 5.40e-08 | 1 |
lower limb segment | 5.40e-08 | 1 |
multi-limb segment region | 5.40e-08 | 1 |
hindlimb muscle | 5.40e-08 | 1 |
hindlimb zeugopod muscle | 5.40e-08 | 1 |
paired limb/fin | 5.40e-08 | 1 |
limb | 5.40e-08 | 1 |
pelvic appendage | 5.40e-08 | 1 |
limb segment | 5.40e-08 | 1 |
paired limb/fin segment | 5.40e-08 | 1 |
limb muscle | 5.40e-08 | 1 |
pelvic complex muscle | 5.40e-08 | 1 |
zeugopod | 5.40e-08 | 1 |
muscle of leg | 5.40e-08 | 1 |
paired limb/fin bud | 5.40e-08 | 1 |
limb bud | 5.40e-08 | 1 |
pelvic appendage bud | 5.40e-08 | 1 |
limb/fin field | 5.40e-08 | 1 |
subdivision of organism along appendicular axis | 5.40e-08 | 1 |
appendage girdle complex | 5.40e-08 | 1 |
leg | 5.40e-08 | 1 |
hindlimb | 5.40e-08 | 1 |
triceps surae | 5.40e-08 | 1 |
hindlimb zeugopod | 5.40e-08 | 1 |
posterior region of body | 5.40e-08 | 1 |
pelvic complex | 5.40e-08 | 1 |
limb field | 5.40e-08 | 1 |
hindlimb/pelvic fin field | 5.40e-08 | 1 |
hematopoietic system | 1.08e-07 | 98 |
blood island | 1.08e-07 | 98 |
hemolymphoid system | 8.67e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 1.07e-09 | 31 |
chronic leukemia | 4.24e-08 | 8 |
chronic myeloid leukemia | 6.19e-08 | 1 |
leukemia | 1.54e-07 | 39 |