FFCP PHASE1:Hg19::chr22:26149439..26149448,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr22:26149439..26149448,+ | |||
|coexpression_cluster_id=C321 | |||
|description=CAGE_peak_at_chr22:26149439..26149448,+ | |description=CAGE_peak_at_chr22:26149439..26149448,+ | ||
|id=chr22:26149439..26149448,+ | |id=chr22:26149439..26149448,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000214;1.22e-14;3!CL:0000039;5.86e-07;7!CL:0000586;5.86e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000214,1.22e-14,3;CL:0000039,5.70e-07,7;CL:0000586,5.70e-07,7 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:114!2.34e-13!2;DOID:0060085!1.51e-07!1;DOID:3165!1.51e-07!1;DOID:0060121!1.51e-07!1;DOID:2438!1.51e-07!1;DOID:4418!1.51e-07!1;DOID:2513!1.95e-07!1;DOID:178!2.66e-07!1;DOID:326!2.66e-07!1;DOID:3978!2.66e-07!1;DOID:3394!2.66e-07!1;DOID:5844!2.66e-07!1;DOID:1287!4.22e-07!4 | |ontology_enrichment_disease=DOID:114!2.34e-13!2;DOID:0060085!1.51e-07!1;DOID:3165!1.51e-07!1;DOID:0060121!1.51e-07!1;DOID:2438!1.51e-07!1;DOID:4418!1.51e-07!1;DOID:2513!1.95e-07!1;DOID:178!2.66e-07!1;DOID:326!2.66e-07!1;DOID:3978!2.66e-07!1;DOID:3394!2.66e-07!1;DOID:5844!2.66e-07!1;DOID:1287!4.22e-07!4 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002146!2.35e-07!1;UBERON:0005623!2.35e-07!1;UBERON:0000014!4.49e-07!4;UBERON:0007190!4.90e-07!1 | |ontology_enrichment_uberon=UBERON:0002146!2.35e-07!1;UBERON:0005623!2.35e-07!1;UBERON:0000014!4.49e-07!4;UBERON:0007190!4.90e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0001905;5.15e-21;2!UBERON:0002757;5.15e-21;2!UBERON:0010134;5.15e-21;2!UBERON:0005408;5.15e-21;2!UBERON:0001899;5.15e-21;2!UBERON:0006915;1.22e-14;3!UBERON:0007616;1.22e-14;3!UBERON:0002217;1.22e-14;3!UBERON:0002018;1.22e-14;3!UBERON:0003296;3.26e-11;4!UBERON:0010133;3.26e-11;4!UBERON:0002784;3.26e-11;4!UBERON:0001871;5.86e-07;6!UBERON:0001894;5.86e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,6.96e-21,2;UBERON:0002757,6.96e-21,2;UBERON:0010134,6.96e-21,2;UBERON:0005408,6.96e-21,2;UBERON:0001899,6.96e-21,2;UBERON:0006915,1.22e-14,3;UBERON:0007616,1.22e-14,3;UBERON:0002217,1.22e-14,3;UBERON:0002018,1.22e-14,3;UBERON:0003296,3.79e-11,4;UBERON:0010133,3.79e-11,4;UBERON:0002784,3.79e-11,4;UBERON:0001871,6.04e-07,6;UBERON:0001894,6.39e-07,7;UBERON:0006222,6.39e-07,7 | |||
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|short_description=p@chr22:26149439..26149448,+ | |short_description=p@chr22:26149439..26149448,+ | ||
}} | }} |
Latest revision as of 19:44, 28 July 2015
Short description: | p@chr22:26149439..26149448, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr22:26149439..26149448, + |
Coexpression cluster: | C321_synovial_anaplastic_maxillary_glassy_keratoacanthoma_rhabdomyosarcoma_small |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
synovial cell | 1.22e-14 | 3 |
germ line cell | 5.70e-07 | 7 |
germ cell | 5.70e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
pineal body | 6.96e-21 | 2 |
regional part of epithalamus | 6.96e-21 | 2 |
secretory circumventricular organ | 6.96e-21 | 2 |
circumventricular organ | 6.96e-21 | 2 |
epithalamus | 6.96e-21 | 2 |
stratified squamous epithelium | 1.22e-14 | 3 |
layer of synovial tissue | 1.22e-14 | 3 |
synovial joint | 1.22e-14 | 3 |
synovial membrane of synovial joint | 1.22e-14 | 3 |
gland of diencephalon | 3.79e-11 | 4 |
neuroendocrine gland | 3.79e-11 | 4 |
regional part of diencephalon | 3.79e-11 | 4 |
temporal lobe | 6.04e-07 | 6 |
diencephalon | 6.39e-07 | 7 |
future diencephalon | 6.39e-07 | 7 |