FFCP PHASE1:Hg19::chr2:136258322..136258327,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:136258322..136258327,- | |||
|description=CAGE_peak_at_chr2:136258322..136258327,- | |description=CAGE_peak_at_chr2:136258322..136258327,- | ||
|id=chr2:136258322..136258327,- | |id=chr2:136258322..136258327,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000333;1.53e-08;5 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;6.50e-14;3!UBERON:0005425;7.43e-11;1 | |||
|ontology_enrichment_disease=DOID:162!9.96e-20!235;DOID:14566!9.31e-19!239;DOID:0050687!9.13e-11!143;DOID:0050686!2.42e-09!137;DOID:2531!1.16e-08!51;DOID:0060083!1.16e-08!51 | |||
|ontology_enrichment_disease_v019=DOID:0060058;2.95e-09;10!DOID:171;4.02e-09;10!DOID:169;2.95e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,2.72e-09,10;DOID:171,4.76e-09,10;DOID:169,4.44e-07,6 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000941;7.43e-11;1!UBERON:0001785;7.43e-11;1!UBERON:0002464;7.43e-11;1!UBERON:0004904;7.43e-11;1!UBERON:0001021;7.43e-11;1!UBERON:0000010;4.44e-10;8!UBERON:0000013;1.53e-08;5!UBERON:0002410;1.53e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,5.05e-11,1;UBERON:0001785,5.05e-11,1;UBERON:0002464,5.05e-11,1;UBERON:0004904,5.05e-11,1;UBERON:0001021,5.05e-11,1;UBERON:0003902,5.05e-11,1;UBERON:0005425,5.05e-11,1;UBERON:0000010,5.89e-10,8;UBERON:0000013,2.51e-08,5;UBERON:0002410,2.51e-08,5;UBERON:0000966,1.90e-07,6;UBERON:0005388,1.90e-07,6;UBERON:0001802,1.90e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.436882744260345,0,0,0.331397375727916,0,0,0,0,0.123121058076788,0,0,0.572471974262113,0.684372125364421,0.753255837568817,0.229240217243854,0.246301768349837,0.236132343941038,0,0,0,0,0,0,1.08454080812422,1.84820002233648,0,0,0,0.217010870715852,0,0,0,0,0.377875943688809,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426224750532694,0.290209238628584,0,0,0.251248665256743,0,0,0.605399502633369,0,0,0,0.212604299965044,0,0,0,0,0,0,0.182664153764634,0,0,0.889509253863555,0,0,0.574752439954483,0,0.954053754535364,0,0,0,0,0,0.790152254325231,0,0,0.205601498999509,0.167186495390678,0,0.473447805734733,0,0,0,0.221533894583621,0,0.128091319725675,0.390178042679635,0.328875809207352,0.829050053357545,0.869409257205157,0.444859689486181,0,0,0.113309342697566,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0.289693037921647,0,0,0.567208902984407,0,0.175669571386252,0.458426764241994,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0.35576626268671,0,0,0,0,0.367663080345869,0,0.0892997282840798,0.22452937262617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0.151357427644931,0,0,0,0,0,0.117434498643765,0,0.421352420106746,0,0.491337269247072,0,0,0,0,0,0.336672227908132,0.125118519871964,0,0.438977620880838,0,0,0.113432183160021,0.538168907066586,0,0,0,0,0.257640540045629,0,0.675105328965065,0.0974370051611986,0,0,0,0,0,0,0,0,0,0.243947412259191,0.132529768321485,0.464775771478074,0.207322110030741,0.504641701751257,1.09493207722749,0,0,0,0,0,0,0,0,0,0,0,0.269662616320329,0,0,0,0,0,0,0,0,0,3.09024169590255,0,0.171567810298526,0.109750285408626,0,0.100528972411631,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179117045405697,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0.285826432630578,0.112131084345361,0,0.07333828582095,0,0,0,0,0,0.257207374262142,1.41849132023278,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0.144781306667579,0.410952645100767,0,0.560425719967636,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.713715955188647,0.157702415033935,0.234282829985426,0,0,0,0,0,0.0868836144680828,0,0.343143423810856,0.206768026122887,0,0,0,0,0,0,0.306923946576125,0.280660094433074,0,0.511707249066704,0,0,0,0,0,0.519254429183621,0,0.241718899183244,0.200506470303285,0.0920809889358963,0,0,0.131124414959424,0,0,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0,0.219259876645935,0.522870902049801,0,0,0,0.103041011647722,0.183138929636687,0.247528499761764,0,0,0,0.096670718292122,0,0.767518373630648,0.551346289938122,0.751941714077915,0.435050081742686,0.0852266274161009,0,0,0,1.27612712494584,0,0,0,0,0.308033580176089,0,0,0.18532421910392,0.143124886741991,0.372158369359667,0.949138274156178,0.190630193923825,0,0,0,0,0.539617372749944,0.274537029736055,0.353437207037059,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0.438450885253763,0.578775534266688,0,0,0,0,0.143411352204052,0,0,0,0,0.329294892959902,0,0,0.0962221127255121,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0.106824071127473,0.962479855263359,0.245040215981032,0.557409525377156,0.28853842595289,0.213425530045242,0.318852545457645,0.399158742865633,0.191505370132367,0.423347165447766,0.973865820823666,0,0.912938716132769,0.47003968731907,0,0.169291777801603,0.321176150207399,0.403599414382095,0,0.687010689511529,0,0.447352215784832,0,0.19538809540204,0.278406173895242,0,0.540911356951966,0,0,0,0,0.121360521749513,0.445773537109913,0,0,0,0,0,0.422008249231538,0.222617410045812,0.494411622680279,1.47787785689595,0,0.276283915531148,0.503865495708552,0.102268682502155,0.123084805461069,0.311039587661807,0.179736702294654,0,0,0,0,0,0,0,0,0.260427761085233,0.0874599999961957,0,0,0,0.709163045303809,0.344743373241465,0.874813840149763,0.868124974666461,0,0.482385754501632,0,0.331737779793674,0,0,0.32681539055697,0,0.307801034015188,0.113942055847001,0.46112780877612,0.179515288819544,0.54323685961004,0.638002319463839,0,0,0,0.31396051279005,0.166211681900156,0.676786981851542,0,0.167821586975843,1.70778359451767,0.158936578980379,0,0.326465616318295,0.282706142867882,0,0,0.176915129006678,0,1.48260564340311,0.247127877893006,0.104421949505455,0.067401132980677,0,0,0.729819156862664,0,0.485560759068186,0,0,0.91821828489147,0.189559738885464,0.60129367765797,0.207376382794494,0.664653872707185,0,0,1.19472429772959,0.284609546029793,0.277349346026277,0.173559738335131,0,0,0,0.51595809741485,0.0967563312890851,0.146178634172371,0.0821154570532092,0.0969890164884194,0.0882561266915003,0,0.274083849293502,0.19871461170299,0,0.195551382734803,0.0801588202515337,0.213452994739353,0,0.288180834308212,0.572682980829578,0.171594997861965,0.432164393964449,0,0.707082103850386,0.815425236441684,0.627617077873999,0.203996435272644,0,0,0.273810757783986,0,0,0,0,0.687481272035051,0,0,0,0.223171457441873,0.0671834724867263,0,1.16495949527454,0.472699093843342,0.412079291905832,0.471824806979294,0.196854963029498,0.423366660328922,0,0.272406812223151,0.96451889079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| ||
|short_description=p@chr2:136258322..136258327,- | |short_description=p@chr2:136258322..136258327,- | ||
}} | }} |
Latest revision as of 00:33, 29 July 2015
Short description: | p@chr2:136258322..136258327, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:136258322..136258327, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 5.05e-11 | 1 |
cranial nerve | 5.05e-11 | 1 |
nerve trunk | 5.05e-11 | 1 |
nerve connecting eye with brain | 5.05e-11 | 1 |
nerve | 5.05e-11 | 1 |
retinal neural layer | 5.05e-11 | 1 |
presumptive neural retina | 5.05e-11 | 1 |
peripheral nervous system | 5.89e-10 | 8 |
sympathetic nervous system | 2.51e-08 | 5 |
autonomic nervous system | 2.51e-08 | 5 |
retina | 1.90e-07 | 6 |
photoreceptor array | 1.90e-07 | 6 |
posterior segment of eyeball | 1.90e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 2.72e-09 | 10 |
neuroectodermal tumor | 4.76e-09 | 10 |
neuroendocrine tumor | 4.44e-07 | 6 |