FFCP PHASE1:Hg19::chr8:24809300..24809311,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4747 | |EntrezGene=4747 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=7739 | |HGNC=7739 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=367bp_to_BC037803_5end | |association_with_transcript=367bp_to_BC037803_5end | ||
|cluster_id=chr8:24809300..24809311,- | |||
|coexpression_cluster_id=C16 | |||
|description=CAGE_peak_4_at_NEFL_5end | |description=CAGE_peak_4_at_NEFL_5end | ||
|id=chr8:24809300..24809311,- | |id=chr8:24809300..24809311,- | ||
|ontology_enrichment_celltype=CL:0000242!9.96e-10!2 | |ontology_enrichment_celltype=CL:0000242!9.96e-10!2 | ||
|ontology_enrichment_celltype_v019=CL:0002553;2.58e-34;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,2.58e-34,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002619!3.70e-49!22;UBERON:0001950!4.36e-48!20;UBERON:0000956!5.29e-43!25;UBERON:0000203!5.29e-43!25;UBERON:0001049!1.21e-42!57;UBERON:0005068!1.21e-42!57;UBERON:0006241!1.21e-42!57;UBERON:0007135!1.21e-42!57;UBERON:0001869!1.94e-41!32;UBERON:0002780!4.25e-39!41;UBERON:0001890!4.25e-39!41;UBERON:0006240!4.25e-39!41;UBERON:0001893!8.42e-39!34;UBERON:0002020!1.10e-38!34;UBERON:0003528!1.10e-38!34;UBERON:0003080!4.56e-38!42;UBERON:0002616!1.34e-37!59;UBERON:0002791!8.36e-36!33;UBERON:0000955!1.14e-33!69;UBERON:0006238!1.14e-33!69;UBERON:0005743!3.42e-33!86;UBERON:0001017!1.38e-32!82;UBERON:0000073!1.01e-31!94;UBERON:0001016!1.01e-31!94;UBERON:0003075!4.79e-31!86;UBERON:0007284!4.79e-31!86;UBERON:0002346!2.21e-29!90;UBERON:0003056!2.51e-27!61;UBERON:0000200!1.87e-25!6;UBERON:0007023!1.46e-23!115;UBERON:0000033!3.89e-21!123;UBERON:0004121!2.32e-20!169;UBERON:0000153!7.49e-20!129;UBERON:0007811!7.49e-20!129;UBERON:0000924!1.02e-19!173;UBERON:0006601!1.02e-19!173;UBERON:0001872!2.72e-14!5;UBERON:0002021!4.66e-14!5;UBERON:0002771!1.04e-13!3;UBERON:0001871!7.47e-13!7;UBERON:0000483!5.23e-12!309;UBERON:0000119!8.25e-12!312;UBERON:0000025!2.99e-11!194;UBERON:0004111!3.33e-11!241;UBERON:0000475!1.64e-09!365;UBERON:0001870!1.73e-09!2;UBERON:0000064!4.08e-09!219;UBERON:0000477!4.64e-09!286;UBERON:0000481!2.46e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;1.31e-25;20!UBERON:0002619;1.90e-23;22!UBERON:0000200;5.13e-23;6!UBERON:0000956;7.93e-21;25!UBERON:0000203;7.93e-21;25!UBERON:0002771;5.48e-18;2!UBERON:0002702;9.86e-18;2!UBERON:0001893;6.66e-16;34!UBERON:0002791;6.74e-16;32!UBERON:0001869;6.74e-16;32!UBERON:0003528;3.77e-15;34!UBERON:0002020;3.77e-15;34!UBERON:0001870;2.74e-12;3!UBERON:0002780;5.90e-09;41!UBERON:0001890;5.90e-09;41!UBERON:0000073;2.45e-08;53!UBERON:0002616;2.45e-08;53!UBERON:0001872;6.78e-08;5!UBERON:0002021;6.78e-08;5!UBERON:0000955;1.06e-07;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,1.27e-25,20;UBERON:0002619,1.84e-23,22;UBERON:0000200,4.34e-23,6;UBERON:0000956,7.73e-21,25;UBERON:0000203,7.73e-21,25;UBERON:0002771,5.48e-18,2;UBERON:0002702,7.67e-18,2;UBERON:0002791,1.45e-16,32;UBERON:0001869,1.45e-16,32;UBERON:0003528,1.18e-15,34;UBERON:0002020,1.18e-15,34;UBERON:0001893,1.18e-15,34;UBERON:0002780,3.76e-13,41;UBERON:0001890,3.76e-13,41;UBERON:0003080,3.76e-13,41;UBERON:0006240,3.76e-13,41;UBERON:0001870,2.31e-12,3;UBERON:0000073,2.34e-10,53;UBERON:0002616,2.34e-10,53;UBERON:0001049,7.69e-10,56;UBERON:0005068,7.69e-10,56;UBERON:0006241,7.69e-10,56;UBERON:0007135,7.69e-10,56;UBERON:0003056,4.34e-09,61;UBERON:0000955,4.15e-08,68;UBERON:0006238,4.15e-08,68;UBERON:0001872,6.55e-08,5;UBERON:0002021,7.49e-08,5;UBERON:0001017,6.53e-07,81;UBERON:0003075,6.53e-07,82;UBERON:0007284,6.53e-07,82 | |||
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| ||
|short_description=p4@NEFL | |short_description=p4@NEFL | ||
}} | }} |
Latest revision as of 16:11, 17 September 2015
Short description: | p4@NEFL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_NEFL_5end |
Coexpression cluster: | C16_medial_amygdala_occipital_parietal_olfactory_putamen_brain |
Association with transcript: | 367bp_to_BC037803_5end |
EntrezGene: | NEFL |
HGNC: | 7739 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 2.58e-34 | 1 |
Ontology term | p-value | n |
---|---|---|
neocortex | 1.27e-25 | 20 |
regional part of cerebral cortex | 1.84e-23 | 22 |
gyrus | 4.34e-23 | 6 |
cerebral cortex | 7.73e-21 | 25 |
pallium | 7.73e-21 | 25 |
middle temporal gyrus | 5.48e-18 | 2 |
middle frontal gyrus | 7.67e-18 | 2 |
regional part of telencephalon | 1.45e-16 | 32 |
cerebral hemisphere | 1.45e-16 | 32 |
brain grey matter | 1.18e-15 | 34 |
gray matter | 1.18e-15 | 34 |
telencephalon | 1.18e-15 | 34 |
regional part of forebrain | 3.76e-13 | 41 |
forebrain | 3.76e-13 | 41 |
anterior neural tube | 3.76e-13 | 41 |
future forebrain | 3.76e-13 | 41 |
frontal cortex | 2.31e-12 | 3 |
regional part of nervous system | 2.34e-10 | 53 |
regional part of brain | 2.34e-10 | 53 |
neural tube | 7.69e-10 | 56 |
neural rod | 7.69e-10 | 56 |
future spinal cord | 7.69e-10 | 56 |
neural keel | 7.69e-10 | 56 |
pre-chordal neural plate | 4.34e-09 | 61 |
brain | 4.15e-08 | 68 |
future brain | 4.15e-08 | 68 |
parietal lobe | 6.55e-08 | 5 |
occipital lobe | 7.49e-08 | 5 |
central nervous system | 6.53e-07 | 81 |
neural plate | 6.53e-07 | 82 |
presumptive neural plate | 6.53e-07 | 82 |