FFCP PHASE1:Hg19::chr14:23791159..23791223,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr14:23791159..23791223,+
|short_description=p2@PABPN1
|description=CAGE_peak_2_at_PABPN1_5end
|association_with_transcript=-7bp_to_ENST00000557702_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8106 | |EntrezGene=8106 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8565 | |HGNC=8565 | ||
|TSSclassifier=strong | |||
|UniProt=B4DEH8 | |UniProt=B4DEH8 | ||
|association_with_transcript=-7bp_to_ENST00000557702_5end | |||
|cluster_id=chr14:23791159..23791223,+ | |||
|description=CAGE_peak_2_at_PABPN1_5end | |||
|id=chr14:23791159..23791223,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.64e-31!180;CL:0002321!2.71e-31!248;CL:0000220!3.53e-31!246;CL:0000548!7.72e-30!679;CL:0000004!7.72e-30!679;CL:0000255!7.72e-30!679;CL:0000012!6.27e-29!682;CL:0000144!8.75e-26!625;CL:0000222!2.48e-24!119;CL:0002371!2.01e-23!591;CL:0000183!2.78e-20!59;CL:0000680!1.54e-19!57;CL:0000056!1.54e-19!57;CL:0000355!1.54e-19!57;CL:0000187!3.83e-18!54;CL:0000393!1.13e-17!60;CL:0000211!1.13e-17!60;CL:0000003!1.17e-15!722;CL:0000192!3.37e-15!42;CL:0000514!3.37e-15!42;CL:0000057!1.05e-11!75;CL:0000359!9.25e-11!32;CL:0000066!2.44e-10!254;CL:0000213!9.15e-08!57;CL:0000215!9.15e-08!57;CL:0000076!3.49e-07!62 | |||
|ontology_enrichment_celltype_v019=CL:0000192;3.11e-11;43!CL:0000187;5.40e-11;55!CL:0000359;2.82e-10;32!CL:0000393;1.48e-09;61!CL:0000211;1.48e-09;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,4.40e-32,250;CL:0000222,1.66e-25,121;CL:0000680,5.58e-20,58;CL:0000056,5.58e-20,58;CL:0000355,5.58e-20,58;CL:0000187,1.50e-18,55;CL:0000393,4.33e-18,61;CL:0000211,4.33e-18,61;CL:0000192,1.61e-15,43;CL:0000514,1.61e-15,43;CL:0000057,1.10e-11,76;CL:0000359,5.49e-11,32;CL:0000066,8.97e-10,253;CL:0000213,3.13e-08,58;CL:0000215,3.13e-08,58;CL:0000076,4.03e-07,63 | |||
|ontology_enrichment_development_v019=CL:0000514;3.11e-11;43!CL:0000355;5.52e-11;58!CL:0000222;2.15e-07;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!5.74e-19!83;UBERON:0002329!5.74e-19!83;UBERON:0003077!5.74e-19!83;UBERON:0003059!5.74e-19!83;UBERON:0007282!5.74e-19!83;UBERON:0009618!5.74e-19!83;UBERON:0007285!5.74e-19!83;UBERON:0000486!1.59e-18!82;UBERON:0004290!2.66e-18!70;UBERON:0005256!3.52e-18!143;UBERON:0002049!5.99e-17!79;UBERON:0007798!5.99e-17!79;UBERON:0001134!1.12e-16!61;UBERON:0002036!1.12e-16!61;UBERON:0003082!1.12e-16!61;UBERON:0000490!1.47e-16!138;UBERON:0002385!1.29e-15!63;UBERON:0001015!1.29e-15!63;UBERON:0000383!1.29e-15!63;UBERON:0003914!2.95e-15!118;UBERON:0000119!1.51e-13!312;UBERON:0002100!1.58e-13!216;UBERON:0000055!5.25e-13!69;UBERON:0000483!6.30e-13!309;UBERON:0001981!6.97e-13!60;UBERON:0007500!6.97e-13!60;UBERON:0004537!6.97e-13!60;UBERON:0006965!6.97e-13!60;UBERON:0001637!8.48e-13!42;UBERON:0003509!8.48e-13!42;UBERON:0004572!8.48e-13!42;UBERON:0000475!6.78e-12!365;UBERON:0003104!7.19e-12!238;UBERON:0009142!7.19e-12!238;UBERON:0004535!9.38e-12!110;UBERON:0000481!4.10e-11!347;UBERON:0004872!5.63e-11!84;UBERON:0004573!1.33e-10!33;UBERON:0004571!1.33e-10!33;UBERON:0001009!2.73e-10!113;UBERON:0000468!1.56e-07!659;UBERON:0000947!1.90e-07!21;UBERON:0010191!1.90e-07!21;UBERON:0003102!4.36e-07!95;UBERON:0000477!7.22e-07!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;9.41e-10;33!UBERON:0004571;9.41e-10;33!UBERON:0001637;1.08e-09;42!UBERON:0003509;1.08e-09;42!UBERON:0004572;1.08e-09;42!UBERON:0007500;6.34e-09;56!UBERON:0001981;6.34e-09;56!UBERON:0004537;6.34e-09;56!UBERON:0002049;5.82e-08;75!UBERON:0007798;5.82e-08;75!UBERON:0003914;6.76e-08;74!UBERON:0000947;1.53e-07;21!UBERON:0010191;1.53e-07;21!UBERON:0000055;1.56e-07;65!UBERON:0002385;5.07e-07;31!UBERON:0001015;5.07e-07;31!UBERON:0000383;5.07e-07;31 | |||
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| ||
|short_description=p2@PABPN1 | |||
}} | }} |
Latest revision as of 09:33, 19 September 2015
Short description: | p2@PABPN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PABPN1_5end |
Coexpression cluster: | NA |
Association with transcript: | -7bp_to_ENST00000557702_5end |
EntrezGene: | PABPN1 |
HGNC: | 8565 |
UniProt: | B4DEH8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 4.40e-32 | 250 |
mesodermal cell | 1.66e-25 | 121 |
muscle precursor cell | 5.58e-20 | 58 |
myoblast | 5.58e-20 | 58 |
multi-potent skeletal muscle stem cell | 5.58e-20 | 58 |
muscle cell | 1.50e-18 | 55 |
electrically responsive cell | 4.33e-18 | 61 |
electrically active cell | 4.33e-18 | 61 |
smooth muscle cell | 1.61e-15 | 43 |
smooth muscle myoblast | 1.61e-15 | 43 |
fibroblast | 1.10e-11 | 76 |
vascular associated smooth muscle cell | 5.49e-11 | 32 |
epithelial cell | 8.97e-10 | 253 |
lining cell | 3.13e-08 | 58 |
barrier cell | 3.13e-08 | 58 |
squamous epithelial cell | 4.03e-07 | 63 |