FFCP PHASE1:Hg19::chr8:29526859..29526890,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:29526859..29526890,- | |||
|description=CAGE_peak_at_chr8:29526859..29526890,- | |description=CAGE_peak_at_chr8:29526859..29526890,- | ||
|id=chr8:29526859..29526890,- | |id=chr8:29526859..29526890,- | ||
|ontology_enrichment_celltype=CL:0000066!2.57e-32!254;CL:0002076!1.19e-27!43;CL:0000223!2.23e-23!59;CL:0002368!6.69e-17!13;CL:0000076!5.19e-12!62;CL:0002159!8.88e-12!13;CL:0002202!5.62e-11!9;CL:0002632!5.62e-11!9;CL:0002251!6.52e-10!21;CL:0000063!5.08e-07!578;CL:0000220!8.35e-07!246 | |ontology_enrichment_celltype=CL:0000066!2.57e-32!254;CL:0002076!1.19e-27!43;CL:0000223!2.23e-23!59;CL:0002368!6.69e-17!13;CL:0000076!5.19e-12!62;CL:0002159!8.88e-12!13;CL:0002202!5.62e-11!9;CL:0002632!5.62e-11!9;CL:0002251!6.52e-10!21;CL:0000063!5.08e-07!578;CL:0000220!8.35e-07!246 | ||
|ontology_enrichment_celltype_v019=CL:0002368;2.95e-22;13!CL:0002076;7.00e-21;42!CL:0002159;7.37e-20;14!CL:0002202;5.98e-12;9!CL:0002632;5.98e-12;9!CL:0002621;1.26e-10;3!CL:0002251;1.31e-10;20!CL:0002077;1.80e-10;34!CL:0002166;4.29e-10;3!CL:0000307;7.29e-10;3!CL:0000362;1.70e-08;9!CL:0000240;2.74e-08;6!CL:0000311;2.74e-08;6!CL:0000079;2.74e-08;6!CL:0000237;2.74e-08;6!CL:0000317;1.97e-07;2!CL:1000448;1.97e-07;2!CL:0002308;1.97e-07;2!CL:0002140;1.97e-07;2!CL:0000082;7.07e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,8.80e-34,253;CL:0002076,8.08e-27,42;CL:0000223,6.20e-24,58;CL:0002368,3.58e-22,13;CL:0002159,7.08e-20,14;CL:0000076,1.80e-13,63;CL:0002077,5.36e-12,34;CL:0002202,6.34e-12,9;CL:0002632,6.34e-12,9;CL:0002621,1.17e-10,3;CL:0002251,1.23e-10,20;CL:0002166,4.56e-10,3;CL:0000068,6.76e-10,3;CL:0000069,6.76e-10,3;CL:0000307,6.76e-10,3;CL:0000377,6.76e-10,3;CL:0002321,4.65e-09,250;CL:0000362,1.62e-08,9;CL:0000240,2.26e-08,6;CL:0000311,2.26e-08,6;CL:0000079,2.26e-08,6;CL:0000237,2.26e-08,6;CL:0000036,2.26e-08,6;CL:0000357,2.26e-08,6;CL:0000114,2.26e-08,6;CL:0000317,2.16e-07,2;CL:1000448,2.16e-07,2;CL:0002308,2.16e-07,2;CL:0002140,2.16e-07,2;CL:0000082,6.94e-07,19 | |||
|ontology_enrichment_development_v019=CL:0000223;3.57e-13;58!CL:0000377;7.29e-10;3!CL:0000357;2.74e-08;6!CL:0000114;2.74e-08;6 | |||
|ontology_enrichment_disease=DOID:305!4.63e-17!106;DOID:1749!6.12e-17!14;DOID:0050687!6.10e-12!143 | |||
|ontology_enrichment_disease_v019=DOID:1749;6.70e-19;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,6.19e-19,14;DOID:305,7.23e-12,106;DOID:0050687,3.20e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0004119!7.83e-19!169;UBERON:0000925!7.83e-19!169;UBERON:0006595!7.83e-19!169;UBERON:0001007!7.46e-13!155;UBERON:0001555!7.46e-13!155;UBERON:0007026!7.46e-13!155;UBERON:0000077!1.32e-12!130;UBERON:0004921!2.99e-10!129;UBERON:0004185!2.99e-10!129;UBERON:0005157!5.96e-10!51;UBERON:0001004!7.55e-10!72;UBERON:0005911!8.14e-10!82;UBERON:0005153!2.44e-09!37;UBERON:0005631!2.27e-08!14;UBERON:0000158!2.27e-08!14;UBERON:0001041!4.23e-08!98;UBERON:0003729!4.28e-08!5;UBERON:0005178!4.58e-08!34;UBERON:0002224!4.58e-08!34;UBERON:0000065!6.04e-08!53;UBERON:0007196!6.19e-08!14;UBERON:0001558!6.19e-08!14;UBERON:0005181!1.03e-07!35;UBERON:0000161!1.85e-07!35;UBERON:0000344!3.82e-07!12;UBERON:0004807!3.84e-07!28 | |||
|ontology_enrichment_uberon_v019=UBERON:0004807;3.64e-12;22!UBERON:0003729;1.25e-10;13!UBERON:0001949;1.26e-10;3!UBERON:0000344;2.16e-10;20!UBERON:0005911;1.58e-09;36!UBERON:0000486;7.72e-09;12!UBERON:0001708;1.17e-07;4!UBERON:0008895;1.17e-07;4!UBERON:0002419;1.97e-07;2!UBERON:0007771;1.97e-07;2!UBERON:0003297;1.97e-07;2!UBERON:0001821;1.97e-07;2!UBERON:0003487;1.97e-07;2!UBERON:0001820;1.97e-07;2!UBERON:0005178;2.35e-07;34!UBERON:0002224;2.35e-07;34!UBERON:0001264;2.60e-07;10!UBERON:0005181;4.25e-07;35!UBERON:0003343;4.93e-07;4!UBERON:0004785;4.93e-07;4!UBERON:0002075;5.60e-07;18!UBERON:0004802;7.07e-07;19!UBERON:0000115;7.07e-07;19!UBERON:0007196;7.26e-07;15!UBERON:0001558;7.26e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,7.43e-14,160;UBERON:0000925,7.43e-14,160;UBERON:0006595,7.43e-14,160;UBERON:0001004,2.09e-11,74;UBERON:0005911,6.88e-11,82;UBERON:0003729,1.14e-10,13;UBERON:0001949,1.17e-10,3;UBERON:0000344,1.89e-10,20;UBERON:0005157,3.44e-09,47;UBERON:0005153,3.56e-09,37;UBERON:0000065,3.97e-09,54;UBERON:0004807,4.00e-09,28;UBERON:0003102,4.90e-09,99;UBERON:0001007,7.53e-09,145;UBERON:0001555,7.53e-09,145;UBERON:0007026,7.53e-09,145;UBERON:0005178,2.15e-08,34;UBERON:0002224,2.15e-08,34;UBERON:0005181,4.33e-08,35;UBERON:0001708,1.22e-07,4;UBERON:0008895,1.22e-07,4;UBERON:0002419,2.16e-07,2;UBERON:0007771,2.16e-07,2;UBERON:0003297,2.16e-07,2;UBERON:0001821,2.16e-07,2;UBERON:0003487,2.16e-07,2;UBERON:0001820,2.16e-07,2;UBERON:0005089,2.16e-07,2;UBERON:0005088,2.16e-07,2;UBERON:0001264,2.46e-07,10;UBERON:0003343,4.98e-07,4;UBERON:0004785,4.98e-07,4;UBERON:0002075,5.49e-07,18;UBERON:0004802,6.94e-07,19;UBERON:0000115,6.94e-07,19;UBERON:0007196,7.50e-07,15;UBERON:0001558,7.50e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,2.53299878168311,0,0,0.245733936501509,0,2.40285509343189,2.37390280405608,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.1136334692682,0.6024118375565,4.43704812200145,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09288586487763,2.96627554227544,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,3.04108842287405,0,0,0,0,0,0,0,0,0,0,0,1.3082821564276,0,0.633152558322899,0,0.286836620748814,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.53717327336858,10.6370987030426,7.4569194801141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.435758888184812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.96325770603289,4.49607013030478,10.9576579928678,3.42577247086559,0,0,0,0,0,0,0,0,0,0,0,0,0,4.68669169933885,8.39910640994298,4.11147782002921,3.22410681730254,7.55648240136301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0.303127571446259,3.32870879020994,0,0,0,0,0,0,0,0,0,0,0,0.519254429183621,0,0.120859449591622,5.21316822788541,4.8802924136025,0,0,0.131124414959424,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0.103041011647722,0,0,5.16838984196555,7.15066270640173,0,0,0,0,0,0,0,0,0,12.8922233981563,6.1500821556834,42.7502586856857,1.0115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.1033218361788,3.35151137767894,3.26672954583968,0.0941438007767792,6.02707521739722,0,0.443430153536676,4.13502120372527,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0,0,0,0.23874448473769,0.296964680832639,0.307160702099232,0,0,0,0,0,0,0.276283915531148,0,0,0,0,4.94275931310298,8.05595286040241,0,0,0,0,0,0,0,0,0,0,0.910347586283997,4.06805840468426,0.472775363535873,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.0769502585037971,0.113942055847001,0,0,0,0,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,0,0.163232808159148,0.282706142867882,0,0,0,0,0,0,0,0,0,0,0,2.54364004611717,0,0,0,0,0,0.150323419414493,0,7.31119259977904,0.992975867626496,2.19753042885058,4.77889719091835,0,0.138674673013139,0,6.85946781900644,1.65412492502765,0,0,0.19351266257817,0.0730893170861856,0.164230914106418,0.193978032976839,0,0,0.685209623233754,0.19871461170299,0,0,1.20238230377301,0,0,0.144090417154106,0,0,7.05868510141934,0.124252535565433,0.707082103850386,0.815425236441684,0.836822770498666,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449947783103001,0,0,0.670869375198532,0,0,0,9.50222898464077,1.53532157855556,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,1.36869470307464,0,0,0,0,0,0,0,3.19170628885091,0.544017803369474,0,0,0,0,0,0,0,0,0,0,0,3.12451019905266,0,0,2.82318983637806,0,0,0,0,0,0,0,0,0.228840068396924,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0.400027764663154,0,0,0,2.11881813448034,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0.303859956177382,0,0,0,0,0,0,1.90180911022764,0,0,0,0,0.184105950251841,1.258915569475,8.70908164046162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294443155503077,4.12894031717091,1.10057159113007,3.69682131681082,0,0,0,0,0,0,0,5.2407013603231,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0.532214220975833,0,2.05785611324902,0,0,0.827356886187777,3.00324785108587,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0.62041277132864,0.955538938977433,0,5.00566191437739,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0,0,0,0,0,0,0,3.03541695629618,4.2347384605883,5.45641293486344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.435433495793923,0,0,0.286888821570705,0,1.22104902916462,0,0,5.4793373285018,0,0,0.406896178315738,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,2.53299878168311,0,0,0.245733936501509,0,2.40285509343189,2.37390280405608,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.1136334692682,0.6024118375565,4.43704812200145,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09288586487763,2.96627554227544,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,3.04108842287405,0,0,0,0,0,0,0,0,0,0,0,1.3082821564276,0,0.633152558322899,0,0.286836620748814,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.53717327336858,10.6370987030426,7.4569194801141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.435758888184812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.96325770603289,4.49607013030478,10.9576579928678,3.42577247086559,0,0,0,0,0,0,0,0,0,0,0,0,0,4.68669169933885,8.39910640994298,4.11147782002921,3.22410681730254,7.55648240136301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0.303127571446259,3.32870879020994,0,0,0,0,0,0,0,0,0,0,0,0.519254429183621,0,0.120859449591622,5.21316822788541,4.8802924136025,0,0,0.131124414959424,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0.103041011647722,0,0,5.16838984196555,7.15066270640173,0,0,0,0,0,0,0,0,0,12.8922233981563,6.1500821556834,42.7502586856857,1.0115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.1033218361788,3.35151137767894,3.26672954583968,0.0941438007767792,6.02707521739722,0,0.443430153536676,4.13502120372527,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0,0,0,0.23874448473769,0.296964680832639,0.307160702099232,0,0,0,0,0,0,0.276283915531148,0,0,0,0,4.94275931310298,8.05595286040241,0,0,0,0,0,0,0,0,0,0,0.910347586283997,4.06805840468426,0.472775363535873,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.0769502585037971,0.113942055847001,0,0,0,0,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,0,0.163232808159148,0.282706142867882,0,0,0,0,0,0,0,0,0,0,0,2.54364004611717,0,0,0,0,0,0.150323419414493,0,7.31119259977904,0.992975867626496,2.19753042885058,4.77889719091835,0,0.138674673013139,0,6.85946781900644,1.65412492502765,0,0,0.19351266257817,0.0730893170861856,0.164230914106418,0.193978032976839,0,0,0.685209623233754,0.19871461170299,0,0,1.20238230377301,0,0,0.144090417154106,0,0,7.05868510141934,0.124252535565433,0.707082103850386,0.815425236441684,0.836822770498666,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449947783103001,0,0,0.670869375198532,0,0,0,9.50222898464077,1.53532157855556,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,1.36869470307464,0,0,0,0,0,0,0,3.19170628885091,0.544017803369474,0,0,0,0,0,0,0,0,0,0,0,3.12451019905266,0,0,2.82318983637806,0,0,0,0,0,0,0,0,0.228840068396924,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0.400027764663154,0,0,0,2.11881813448034,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0.303859956177382,0,0,0,0,0,0,1.90180911022764,0,0,0,0,0.184105950251841,1.258915569475,8.70908164046162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294443155503077,4.12894031717091,1.10057159113007,3.69682131681082,0,0,0,0,0,0,0,5.2407013603231,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0.532214220975833,0,2.05785611324902,0,0,0.827356886187777,3.00324785108587,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0.62041277132864,0.955538938977433,0,5.00566191437739,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0,0,0,0,0,0,0,3.03541695629618,4.2347384605883,5.45641293486344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.435433495793923,0,0,0.286888821570705,0,1.22104902916462,0,0,5.4793373285018,0,0,0.406896178315738,0,0.201273793591026,0 | ||
|short_description=p@chr8:29526859..29526890,- | |short_description=p@chr8:29526859..29526890,- | ||
}} | }} |
Latest revision as of 17:47, 31 July 2015
Short description: | p@chr8:29526859..29526890, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:29526859..29526890, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 6.19e-19 | 14 |
carcinoma | 7.23e-12 | 106 |
cell type cancer | 3.20e-07 | 143 |