FFCP PHASE1:Hg19::chr14:24780680..24780718,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr14:24780680..24780718,+
|short_description=p1@LTB4R
|description=CAGE_peak_1_at_LTB4R_5end
|association_with_transcript=0bp_to_ENST00000345363,NM_001143919,u...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1241 | |EntrezGene=1241 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6713 | |HGNC=6713 | ||
|TSSclassifier=strong | |||
|UniProt=Q15722 | |UniProt=Q15722 | ||
|association_with_transcript=0bp_to_ENST00000345363,NM_001143919,uc001wos.2_5end | |||
|cluster_id=chr14:24780680..24780718,+ | |||
|description=CAGE_peak_1_at_LTB4R_5end | |||
|id=chr14:24780680..24780718,+ | |||
|ontology_enrichment_celltype=CL:0000763!1.55e-39!112;CL:0000049!1.55e-39!112;CL:0000037!2.05e-39!172;CL:0000566!2.05e-39!172;CL:0000988!3.81e-38!182;CL:0002032!9.02e-38!165;CL:0000837!9.02e-38!165;CL:0000766!2.35e-31!76;CL:0000839!5.40e-28!70;CL:0000738!8.32e-28!140;CL:0000557!1.35e-27!71;CL:0002194!2.85e-25!63;CL:0000576!2.85e-25!63;CL:0000040!2.85e-25!63;CL:0000559!2.85e-25!63;CL:0002009!1.27e-24!65;CL:0002031!1.97e-24!124;CL:0002087!2.86e-24!119;CL:0000860!1.54e-23!45;CL:0002057!7.17e-22!42;CL:0000134!3.37e-11!358;CL:0002320!1.88e-10!365;CL:0000219!4.14e-08!390 | |||
|ontology_enrichment_celltype_v019=CL:0000576;1.67e-22;48!CL:0000860;3.91e-21;33!CL:0002057;3.91e-21;33!CL:0000766;9.20e-21;69!CL:0000763;6.87e-20;100!CL:0000473;3.17e-19;39!CL:0000234;3.17e-19;39!CL:0002087;2.33e-11;104!CL:0000988;3.93e-10;177!CL:0000738;1.11e-08;136!CL:0002393;1.03e-07;6!CL:0002397;1.03e-07;6!CL:0000094;1.53e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,3.73e-56,108;CL:0000049,3.73e-56,108;CL:0000037,2.99e-55,168;CL:0000988,1.30e-54,177;CL:0002032,4.46e-52,161;CL:0000837,4.46e-52,161;CL:0000766,2.76e-42,72;CL:0000738,2.16e-36,136;CL:0000839,1.12e-35,66;CL:0000557,1.95e-35,67;CL:0000473,3.37e-33,48;CL:0000234,3.37e-33,48;CL:0002194,1.43e-32,59;CL:0000576,1.43e-32,59;CL:0000040,1.43e-32,59;CL:0000559,1.43e-32,59;CL:0000860,6.88e-32,42;CL:0002057,6.88e-32,42;CL:0002009,6.21e-31,61;CL:0002087,1.47e-30,115;CL:0002031,1.38e-29,120;CL:0000134,9.71e-14,354;CL:0002320,7.69e-13,361;CL:0000219,1.65e-10,386;CL:0002393,1.42e-09,9;CL:0002397,1.42e-09,9;CL:0000094,1.65e-07,8;CL:0000048,7.73e-07,427 | |||
|ontology_enrichment_development_v019=CL:0002057;7.81e-23;42!CL:0000049;8.08e-17;108 | |||
|ontology_enrichment_disease=DOID:1240!1.21e-12!39;DOID:8692!3.59e-11!31;DOID:2531!2.97e-10!51;DOID:0060083!2.97e-10!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;2.11e-18;31!DOID:1240;4.12e-16;39!DOID:2531;2.00e-11;51!DOID:0060083;2.00e-11;51 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,3.37e-22,39;DOID:8692,3.02e-19,31;DOID:2531,4.83e-18,51;DOID:0060083,4.83e-18,51 | |||
|ontology_enrichment_uberon=UBERON:0002390!3.03e-38!102;UBERON:0003061!3.03e-38!102;UBERON:0002193!9.27e-38!112;UBERON:0002371!5.52e-27!80;UBERON:0002405!2.04e-23!115;UBERON:0001474!8.78e-23!86;UBERON:0004765!5.11e-20!101;UBERON:0001434!5.11e-20!101;UBERON:0003081!9.16e-17!216;UBERON:0000178!5.54e-10!15;UBERON:0000179!5.54e-10!15;UBERON:0000463!5.54e-10!15;UBERON:0002384!2.15e-09!375;UBERON:0002204!4.93e-08!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.98e-14;15!UBERON:0000179;1.98e-14;15!UBERON:0000463;1.98e-14;15!UBERON:0002390;2.98e-10;32!UBERON:0002193;5.43e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.26e-47,98;UBERON:0003061,1.26e-47,98;UBERON:0002193,1.18e-45,108;UBERON:0002371,4.11e-33,76;UBERON:0002405,7.62e-33,93;UBERON:0001474,3.21e-29,82;UBERON:0004765,7.11e-25,90;UBERON:0001434,1.99e-21,100;UBERON:0003081,5.23e-20,203;UBERON:0000178,1.17e-14,15;UBERON:0000179,1.17e-14,15;UBERON:0000463,1.17e-14,15;UBERON:0002384,4.35e-12,371;UBERON:0000926,3.44e-07,315;UBERON:0004120,3.44e-07,315;UBERON:0006603,3.44e-07,315;UBERON:0002204,4.17e-07,167 | |||
|phase1_expression=0,0.428201047781966,0.140954404095971,0,0,0,0,0.631719873426831,0.522371256399677,0,1.39560233594486,0.436882744260345,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,1.60468152070698,0.57470412614962,1.65292640758726,7.08055698328027,7.29275856384704,5.26374819274658,0,0.90361775633475,0.739508020333575,0,0,6.16560922603179,5.53995408531877,8.22232234627581,8.24641308720237,1.34349284543955,2.59114932815184,2.31818010870768,2.90796477559129,3.02300754951048,0.727752183563449,3.71886459049095,2.87817521615278,3.40677007984614,2.3015391385772,1.5369642391746,3.54723344832878,3.44745680736619,1.93645405075148,4.06279459783025,4.1413314699373,1.63743690034707,1.79778787556068,2.14258724659632,2.56743221660875,5.11469700639233,6.26717470354761,1.39624560335142,2.13112375266347,2.90209238628584,2.26954089876456,1.24564449799115,4.77372463987812,1.5644487552606,4.34377689410233,1.81619850790011,2.20966581592539,1.89877432464531,6.5489138756702,4.46469029926591,12.5795187305026,16.6246374096813,17.4205195696147,10.9293398954014,2.56511469367124,1.19350006319454,4.56660384411585,1.75996244461323,0,0,0.853460445133014,0,0.574752439954483,0,0,0,0,0,2.64342657158052,1.12101712596307,6.847986204152,0,0,0.411202997999018,0.501559486172034,0,0.473447805734733,0,2.89667187901451,0,0,0,2.30564375506215,4.29195846947598,7.89301942097645,6.90875044464621,8.11448640058147,0,0,0,6.00539516297101,1.14966148080576,0,1.51811815211702,0.637130828648193,0.651083453856419,2.85135613334512,1.95747654801105,1.27986611154418,0,3.07810427657222,1.64225599384209,1.00803371612366,0.267440195783507,0.289648807765598,0,0.670700859703636,0.255725123687061,0,0.50133791063589,0.289693037921647,0,0.486634870302636,0,0,0,0.327447688744282,2.18577172975525,0.741568885568859,0.324547393654683,0.348259474598534,0.398873881556595,0.953962497221368,0,1.11437250398869,0.596287222100115,0,0.347140501607594,0,0.419499436209906,0.825354125820202,0.208994966536811,1.03366703667732,1.06729878806013,0,0.402829317109147,4.56163263431108,0.732186172644509,0.735326160691737,0,3.21479021822687,2.69435247151404,3.82879033643296,3.06633274931766,0.949265659568129,1.09921046358244,18.4492584410489,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0.538842688278752,0,0,0,0.234321431833797,0.624320153660641,1.71141546463335,0.298897361103602,0,0,0,0.204154171254893,0.122834317311768,0.309977343527296,0,0,0,0,0.336672227908132,0,0.277064115484183,0,0,0.300476117813194,0.226864366320042,0,0.640672166455702,0,0,0.309157587715317,0,0.18611685633159,0,0,0,0.184099797284599,0.161646056818812,0,0,0.508681776931463,0.57978255948989,0.818238361772504,0,0,0,0.116193942869518,0.207322110030741,0,0,0,0,0,0.464367928031979,0.721879481669586,0,0,0,0,0,0,0,0,0,0.738155454624648,1.40241773803446,0,0,0,0,0.590789906681404,0,0,0,0.219500570817251,0,0.703702806881416,0.0925884451585296,0,0,0,0,0,0.433099343283221,0.462985512576611,0.761016608938393,0,0,1.72351904261178,0.468008530278475,2.67536092119711,0,0.16798212819886,0.141775097242386,0.0895585227028483,0,0,2.95597942737566,13.4714104040236,1.03664057770386,1.72943944100354,1.2624243342638,0.063497894292169,0.763976851116555,1.17217447210047,1.71072446022705,0.102827492703324,0,0,0.112131084345361,0,0,0,3.57656445851882,0.845302752556,0,0,1.02882949704857,0,0.799266537048298,0,0.542621605391443,0,0.325736184293735,0,2.37585561880029,0,0,0,8.51366464488333,7.5338563714819,0,0,0,0,0,0,0,19.0544744788996,1.57624608161542,2.15627574859517,3.08023287071396,0,0,0,0,0,3.74503511973591,14.9580729602012,10.3603878359009,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,0,0,4.9624326269493,6.47142602455851,4.58928498554811,0,1.66435439510497,0.604780586659361,0.248107807818777,0.153461973288062,0,0.128139149255701,0,0,0,0.308419387605311,0.532685175939381,0.246381468041427,0,0.697262270759755,0,0,0.0920809889358963,0.114814448164607,0,0,0,0,0,0,0.105551628892876,5.68666920354483,2.2112181685947,0.863663664408557,1.54227252690289,0,0,0.254876273045038,0,0,0.657779629937804,1.5686127061494,0,0,0,1.13345112812495,0,0,0,0.650060246036521,1.6068392984416,0.096670718292122,0.462145851343933,0.460511024178389,0.551346289938122,0.429680979473094,0.290033387828457,0.426133137080504,0,0,0.192190067365106,0,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0.95460974377781,0,0,0,0.117812402345686,0,0,0,0.48763373908959,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0.0982490410131212,0,0.354761064070598,0.633322905892992,0.987884678879706,0.379473173765715,0,1.25088746543166,0,2.17781969722645,0.941438007767792,0,0,0,0,3.55213326462519,5.35246044999663,4.5571774973933,1.90585420366231,7.4045209155515,3.8908398671563,8.64050299580984,7.13812658664843,0,0,0,5.38829207864584,1.87549976869378,0,0,0,22.0231175652222,17.1455602006345,12.0110117901586,7.58152380906339,16.4328968903898,11.1242725998846,15.038068625404,10.4960902236994,13.8105744589182,12.915181260227,14.9046183191614,18.8927939615671,5.22309299324379,9.61807263937388,7.8419096604597,61.1564738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| ||
|short_description=p1@LTB4R | |||
}} | }} |
Latest revision as of 14:35, 19 September 2015
Short description: | p1@LTB4R |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LTB4R_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000345363, NM_001143919, uc001wos.2_5end |
EntrezGene: | LTB4R |
HGNC: | 6713 |
UniProt: | Q15722 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 3.73e-56 | 108 |
common myeloid progenitor | 3.73e-56 | 108 |
hematopoietic stem cell | 2.99e-55 | 168 |
hematopoietic cell | 1.30e-54 | 177 |
hematopoietic oligopotent progenitor cell | 4.46e-52 | 161 |
hematopoietic multipotent progenitor cell | 4.46e-52 | 161 |
myeloid leukocyte | 2.76e-42 | 72 |
leukocyte | 2.16e-36 | 136 |
myeloid lineage restricted progenitor cell | 1.12e-35 | 66 |
granulocyte monocyte progenitor cell | 1.95e-35 | 67 |
defensive cell | 3.37e-33 | 48 |
phagocyte | 3.37e-33 | 48 |
monopoietic cell | 1.43e-32 | 59 |
monocyte | 1.43e-32 | 59 |
monoblast | 1.43e-32 | 59 |
promonocyte | 1.43e-32 | 59 |
classical monocyte | 6.88e-32 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.88e-32 | 42 |
macrophage dendritic cell progenitor | 6.21e-31 | 61 |
nongranular leukocyte | 1.47e-30 | 115 |
hematopoietic lineage restricted progenitor cell | 1.38e-29 | 120 |
mesenchymal cell | 9.71e-14 | 354 |
connective tissue cell | 7.69e-13 | 361 |
motile cell | 1.65e-10 | 386 |
intermediate monocyte | 1.42e-09 | 9 |
CD14-positive, CD16-positive monocyte | 1.42e-09 | 9 |
granulocyte | 1.65e-07 | 8 |
multi fate stem cell | 7.73e-07 | 427 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.26e-47 | 98 |
blood island | 1.26e-47 | 98 |
hemolymphoid system | 1.18e-45 | 108 |
bone marrow | 4.11e-33 | 76 |
immune system | 7.62e-33 | 93 |
bone element | 3.21e-29 | 82 |
skeletal element | 7.11e-25 | 90 |
skeletal system | 1.99e-21 | 100 |
lateral plate mesoderm | 5.23e-20 | 203 |
blood | 1.17e-14 | 15 |
haemolymphatic fluid | 1.17e-14 | 15 |
organism substance | 1.17e-14 | 15 |
connective tissue | 4.35e-12 | 371 |
mesoderm | 3.44e-07 | 315 |
mesoderm-derived structure | 3.44e-07 | 315 |
presumptive mesoderm | 3.44e-07 | 315 |
musculoskeletal system | 4.17e-07 | 167 |
Ontology term | p-value | n |
---|---|---|
leukemia | 3.37e-22 | 39 |
myeloid leukemia | 3.02e-19 | 31 |
hematologic cancer | 4.83e-18 | 51 |
immune system cancer | 4.83e-18 | 51 |