FFCP PHASE1:Hg19::chr14:35452153..35452167,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr14:35452153..35452167,+
|short_description=p5@SRP54
|description=CAGE_peak_5_at_SRP54_5end
|association_with_transcript=-11bp_to_ENST00000553544_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6729 | |EntrezGene=6729 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11301 | |HGNC=11301 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-11bp_to_ENST00000553544_5end | |||
|cluster_id=chr14:35452153..35452167,+ | |||
|description=CAGE_peak_5_at_SRP54_5end | |||
|id=chr14:35452153..35452167,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.38e-24!115;UBERON:0001049!2.18e-11!57;UBERON:0005068!2.18e-11!57;UBERON:0006241!2.18e-11!57;UBERON:0007135!2.18e-11!57;UBERON:0003080!5.83e-10!42;UBERON:0002780!1.14e-09!41;UBERON:0001890!1.14e-09!41;UBERON:0006240!1.14e-09!41;UBERON:0002616!4.69e-09!59;UBERON:0001893!1.73e-08!34;UBERON:0002020!2.47e-08!34;UBERON:0003528!2.47e-08!34;UBERON:0002791!3.87e-08!33;UBERON:0001869!1.04e-07!32;UBERON:0000955!4.36e-07!69;UBERON:0006238!4.36e-07!69;UBERON:0003075!9.87e-07!86;UBERON:0007284!9.87e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;2.93e-07;41!UBERON:0001890;2.93e-07;41!UBERON:0007023;5.18e-07;114!UBERON:0001893;5.72e-07;34!UBERON:0003528;6.69e-07;34!UBERON:0002020;6.69e-07;34!UBERON:0002619;6.87e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.60e-25,114;UBERON:0001049,9.12e-12,56;UBERON:0005068,9.12e-12,56;UBERON:0006241,9.12e-12,56;UBERON:0007135,9.12e-12,56;UBERON:0000073,1.76e-10,53;UBERON:0002616,1.76e-10,53;UBERON:0002780,1.12e-09,41;UBERON:0001890,1.12e-09,41;UBERON:0003080,1.12e-09,41;UBERON:0006240,1.12e-09,41;UBERON:0001893,1.27e-08,34;UBERON:0003528,1.85e-08,34;UBERON:0002020,1.85e-08,34;UBERON:0001869,8.70e-08,32;UBERON:0002791,9.08e-08,32;UBERON:0003075,2.24e-07,82;UBERON:0007284,2.24e-07,82;UBERON:0002619,3.27e-07,22;UBERON:0000955,5.81e-07,68;UBERON:0006238,5.81e-07,68;UBERON:0002346,9.19e-07,86 | |||
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| ||
|short_description=p5@SRP54 | |||
}} | }} |
Latest revision as of 19:49, 19 September 2015
Short description: | p5@SRP54 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SRP54_5end |
Coexpression cluster: | NA |
Association with transcript: | -11bp_to_ENST00000553544_5end |
EntrezGene: | SRP54 |
HGNC: | 11301 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 2.60e-25 | 114 |
neural tube | 9.12e-12 | 56 |
neural rod | 9.12e-12 | 56 |
future spinal cord | 9.12e-12 | 56 |
neural keel | 9.12e-12 | 56 |
regional part of nervous system | 1.76e-10 | 53 |
regional part of brain | 1.76e-10 | 53 |
regional part of forebrain | 1.12e-09 | 41 |
forebrain | 1.12e-09 | 41 |
anterior neural tube | 1.12e-09 | 41 |
future forebrain | 1.12e-09 | 41 |
telencephalon | 1.27e-08 | 34 |
brain grey matter | 1.85e-08 | 34 |
gray matter | 1.85e-08 | 34 |
cerebral hemisphere | 8.70e-08 | 32 |
regional part of telencephalon | 9.08e-08 | 32 |
neural plate | 2.24e-07 | 82 |
presumptive neural plate | 2.24e-07 | 82 |
regional part of cerebral cortex | 3.27e-07 | 22 |
brain | 5.81e-07 | 68 |
future brain | 5.81e-07 | 68 |
neurectoderm | 9.19e-07 | 86 |