FFCP PHASE1:Hg19::chr8:82434656..82434664,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=3981 | |HGNC=3981 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-189bp_to_ENST00000517577_5end | |association_with_transcript=-189bp_to_ENST00000517577_5end | ||
|cluster_id=chr8:82434656..82434664,- | |||
|coexpression_cluster_id=C804 | |||
|description=CAGE_peak_1_at_FTH1P11_5end | |description=CAGE_peak_1_at_FTH1P11_5end | ||
|id=chr8:82434656..82434664,- | |id=chr8:82434656..82434664,- | ||
|ontology_enrichment_celltype=CL:0000766!2.35e-24!76;CL:0002057!7.76e-24!42;CL:0000860!2.91e-23!45;CL:0002194!1.42e-22!63;CL:0000576!1.42e-22!63;CL:0000040!1.42e-22!63;CL:0000559!1.42e-22!63;CL:0002009!5.30e-22!65;CL:0000839!1.20e-21!70;CL:0000557!2.67e-19!71;CL:0000548!9.61e-15!679;CL:0000004!9.61e-15!679;CL:0000255!9.61e-15!679;CL:0000012!1.17e-14!682;CL:0000003!1.11e-13!722;CL:0000144!1.32e-11!625;CL:0002371!1.39e-11!591;CL:0000063!3.30e-11!578;CL:0000763!8.59e-11!112;CL:0000049!8.59e-11!112;CL:0000048!2.43e-09!430;CL:0000723!6.46e-09!436;CL:0000034!8.67e-09!444 | |ontology_enrichment_celltype=CL:0000766!2.35e-24!76;CL:0002057!7.76e-24!42;CL:0000860!2.91e-23!45;CL:0002194!1.42e-22!63;CL:0000576!1.42e-22!63;CL:0000040!1.42e-22!63;CL:0000559!1.42e-22!63;CL:0002009!5.30e-22!65;CL:0000839!1.20e-21!70;CL:0000557!2.67e-19!71;CL:0000548!9.61e-15!679;CL:0000004!9.61e-15!679;CL:0000255!9.61e-15!679;CL:0000012!1.17e-14!682;CL:0000003!1.11e-13!722;CL:0000144!1.32e-11!625;CL:0002371!1.39e-11!591;CL:0000063!3.30e-11!578;CL:0000763!8.59e-11!112;CL:0000049!8.59e-11!112;CL:0000048!2.43e-09!430;CL:0000723!6.46e-09!436;CL:0000034!8.67e-09!444 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.78e-19;33!CL:0002057;1.78e-19;33!CL:0000473;1.93e-19;39!CL:0000234;1.93e-19;39!CL:0000576;6.23e-14;48!CL:0000766;2.57e-11;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,3.88e-28,48;CL:0000234,3.88e-28,48;CL:0000766,5.58e-25,72;CL:0000860,1.89e-24,42;CL:0002057,1.89e-24,42;CL:0002194,1.50e-23,59;CL:0000576,1.50e-23,59;CL:0000040,1.50e-23,59;CL:0000559,1.50e-23,59;CL:0002009,9.89e-23,61;CL:0000839,3.47e-22,66;CL:0000557,9.61e-20,67;CL:0000763,1.32e-11,108;CL:0000049,1.32e-11,108;CL:0000048,4.86e-10,427;CL:0000723,1.46e-09,433;CL:0000034,1.88e-09,441 | |||
|ontology_enrichment_development_v019=CL:0002057;9.77e-18;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.64e-19!80;UBERON:0002204!3.44e-19!167;UBERON:0002193!3.28e-17!112;UBERON:0004765!4.84e-17!101;UBERON:0001434!4.84e-17!101;UBERON:0001474!8.36e-17!86;UBERON:0002390!1.31e-16!102;UBERON:0003061!1.31e-16!102;UBERON:0000926!1.37e-14!448;UBERON:0004120!1.37e-14!448;UBERON:0006603!1.37e-14!448;UBERON:0002405!1.60e-14!115;UBERON:0003081!7.14e-14!216;UBERON:0000468!8.74e-08!659;UBERON:0000923!3.82e-07!604;UBERON:0005291!3.82e-07!604;UBERON:0006598!3.82e-07!604;UBERON:0002532!3.82e-07!604;UBERON:0002050!5.14e-07!605;UBERON:0005423!5.14e-07!605;UBERON:0000922!9.29e-07!612 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,4.87e-20,167;UBERON:0002371,7.18e-20,76;UBERON:0004765,1.87e-18,90;UBERON:0001434,1.45e-17,100;UBERON:0002193,2.92e-17,108;UBERON:0001474,3.48e-17,82;UBERON:0002390,9.05e-17,98;UBERON:0003061,9.05e-17,98;UBERON:0002405,9.32e-17,93;UBERON:0000926,1.33e-14,315;UBERON:0004120,1.33e-14,315;UBERON:0006603,1.33e-14,315;UBERON:0003081,1.70e-12,203 | |||
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| ||
|short_description=p1@FTH1P11 | |short_description=p1@FTH1P11 | ||
}} | }} |
Latest revision as of 06:13, 19 September 2015
Short description: | p1@FTH1P11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FTH1P11_5end |
Coexpression cluster: | C804_Smooth_mesenchymal_CD14_Mesenchymal_Cardiac_Adipocyte_Fibroblast |
Association with transcript: | -189bp_to_ENST00000517577_5end |
EntrezGene: | NA |
HGNC: | 3981 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 3.88e-28 | 48 |
phagocyte | 3.88e-28 | 48 |
myeloid leukocyte | 5.58e-25 | 72 |
classical monocyte | 1.89e-24 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.89e-24 | 42 |
monopoietic cell | 1.50e-23 | 59 |
monocyte | 1.50e-23 | 59 |
monoblast | 1.50e-23 | 59 |
promonocyte | 1.50e-23 | 59 |
macrophage dendritic cell progenitor | 9.89e-23 | 61 |
myeloid lineage restricted progenitor cell | 3.47e-22 | 66 |
granulocyte monocyte progenitor cell | 9.61e-20 | 67 |
myeloid cell | 1.32e-11 | 108 |
common myeloid progenitor | 1.32e-11 | 108 |
multi fate stem cell | 4.86e-10 | 427 |
somatic stem cell | 1.46e-09 | 433 |
stem cell | 1.88e-09 | 441 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 4.87e-20 | 167 |
bone marrow | 7.18e-20 | 76 |
skeletal element | 1.87e-18 | 90 |
skeletal system | 1.45e-17 | 100 |
hemolymphoid system | 2.92e-17 | 108 |
bone element | 3.48e-17 | 82 |
hematopoietic system | 9.05e-17 | 98 |
blood island | 9.05e-17 | 98 |
immune system | 9.32e-17 | 93 |
mesoderm | 1.33e-14 | 315 |
mesoderm-derived structure | 1.33e-14 | 315 |
presumptive mesoderm | 1.33e-14 | 315 |
lateral plate mesoderm | 1.70e-12 | 203 |