FFCP PHASE1:Hg19::chr9:133992897..133992908,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:133992897..133992908,+ | |||
|description=CAGE_peak_at_chr9:133992897..133992908,+ | |description=CAGE_peak_at_chr9:133992897..133992908,+ | ||
|id=chr9:133992897..133992908,+ | |id=chr9:133992897..133992908,+ | ||
|ontology_enrichment_celltype=CL:0002139!4.26e-42!24;CL:0000115!4.92e-34!35;CL:0000071!1.54e-29!18;CL:0002546!1.54e-29!18;CL:0002078!6.32e-26!44;CL:1000413!1.94e-23!9;CL:0000213!8.52e-21!57;CL:0000215!8.52e-21!57;CL:0002544!1.30e-20!6;CL:0005020!3.18e-14!6;CL:0002138!3.18e-14!6;CL:0005022!3.18e-14!6;CL:0002618!5.24e-11!3;CL:0000076!1.39e-08!62;CL:0000222!4.39e-08!119;CL:0002545!8.68e-08!2 | |ontology_enrichment_celltype=CL:0002139!4.26e-42!24;CL:0000115!4.92e-34!35;CL:0000071!1.54e-29!18;CL:0002546!1.54e-29!18;CL:0002078!6.32e-26!44;CL:1000413!1.94e-23!9;CL:0000213!8.52e-21!57;CL:0000215!8.52e-21!57;CL:0002544!1.30e-20!6;CL:0005020!3.18e-14!6;CL:0002138!3.18e-14!6;CL:0005022!3.18e-14!6;CL:0002618!5.24e-11!3;CL:0000076!1.39e-08!62;CL:0000222!4.39e-08!119;CL:0002545!8.68e-08!2 | ||
|ontology_enrichment_celltype_v019=CL:0002139;5.55e-60;24!CL:0000071;1.67e-48;18!CL:0002544;2.12e-48;6!CL:0000115;4.93e-41;36!CL:1000413;1.82e-32;9!CL:0002078;4.81e-25;45!CL:0002618;7.92e-25;3!CL:0000213;5.01e-18;58!CL:0000215;5.01e-18;58!CL:0002138;4.25e-13;6!CL:0002543;6.12e-13;6!CL:0002262;2.60e-10;2!CL:0002545;2.60e-10;2!CL:1000398;2.60e-10;2!CL:0000076;2.98e-09;63!CL:0002144;2.71e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,4.23e-60,24;CL:0000115,2.66e-49,36;CL:0000071,1.68e-48,18;CL:0002546,1.68e-48,18;CL:0002544,1.77e-48,6;CL:0002078,2.27e-39,45;CL:1000413,1.61e-32,9;CL:0000213,1.87e-30,58;CL:0000215,1.87e-30,58;CL:0002618,1.29e-24,3;CL:0000222,2.58e-14,121;CL:0000076,9.97e-14,63;CL:0005020,3.34e-13,6;CL:0002138,3.34e-13,6;CL:0005022,3.34e-13,6;CL:0002543,7.78e-13,6;CL:0002545,2.49e-10,2;CL:0002262,2.72e-10,2;CL:1000398,2.72e-10,2;CL:0002144,2.32e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002546;1.67e-48;18!CL:0005022;4.25e-13;6!CL:0000222;3.39e-08;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!1.54e-29!18;UBERON:0004638!1.54e-29!18;UBERON:0004852!1.54e-29!18;UBERON:0000487!1.47e-23!22;UBERON:0003915!1.94e-23!9;UBERON:0004700!1.94e-23!9;UBERON:0001917!1.94e-23!9;UBERON:0006914!2.48e-20!25;UBERON:0000055!4.18e-18!69;UBERON:0002049!4.56e-15!79;UBERON:0007798!4.56e-15!79;UBERON:0004111!5.08e-13!241;UBERON:0000025!5.60e-13!194;UBERON:0001981!4.24e-12!60;UBERON:0007500!4.24e-12!60;UBERON:0004537!4.24e-12!60;UBERON:0006965!4.24e-12!60;UBERON:0001009!5.30e-12!113;UBERON:0000477!1.43e-11!286;UBERON:0004535!2.63e-11!110;UBERON:0004872!1.10e-10!84;UBERON:0001473!1.45e-10!8;UBERON:0004536!1.45e-10!8;UBERON:0006558!1.45e-10!8;UBERON:0007023!5.03e-10!115;UBERON:0001049!1.88e-09!57;UBERON:0005068!1.88e-09!57;UBERON:0006241!1.88e-09!57;UBERON:0007135!1.88e-09!57;UBERON:0002616!5.11e-09!59;UBERON:0002465!2.30e-08!10;UBERON:0000483!2.33e-08!309;UBERON:0000119!3.48e-08!312;UBERON:0000955!4.00e-08!69;UBERON:0006238!4.00e-08!69;UBERON:0005800!8.68e-08!2;UBERON:0001515!8.68e-08!2;UBERON:0001017!2.90e-07!82;UBERON:0003914!4.46e-07!118;UBERON:0003127!5.05e-07!2;UBERON:0003075!5.72e-07!86;UBERON:0007284!5.72e-07!86;UBERON:0005743!9.25e-07!86;UBERON:0002066!9.78e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.67e-48;18!UBERON:0001986;1.67e-48;18!UBERON:0004852;1.67e-48;18!UBERON:0000487;1.12e-39;22!UBERON:0006914;6.60e-35;25!UBERON:0003915;1.82e-32;9!UBERON:0004700;1.82e-32;9!UBERON:0001917;1.82e-32;9!UBERON:0000490;3.86e-24;33!UBERON:0002066;2.51e-15;5!UBERON:0000055;7.96e-15;65!UBERON:0000947;3.56e-14;21!UBERON:0010191;3.56e-14;21!UBERON:0007500;6.99e-13;56!UBERON:0001981;6.99e-13;56!UBERON:0004537;6.99e-13;56!UBERON:0003914;1.45e-10;74!UBERON:0001281;2.60e-10;2!UBERON:0003497;2.60e-10;2!UBERON:0003909;2.60e-10;2!UBERON:0005800;2.60e-10;2!UBERON:0003835;2.60e-10;2!UBERON:0001515;2.60e-10;2!UBERON:0001473;4.62e-10;8!UBERON:0004536;4.62e-10;8!UBERON:0006558;4.62e-10;8!UBERON:0004535;2.51e-09;109!UBERON:0004573;3.15e-09;33!UBERON:0004571;3.15e-09;33!UBERON:0001638;6.10e-09;9!UBERON:0010260;6.10e-09;9!UBERON:0003920;6.10e-09;9!UBERON:0004582;6.10e-09;9!UBERON:0002465;3.14e-08;10!UBERON:0001637;3.71e-08;42!UBERON:0003509;3.71e-08;42!UBERON:0004572;3.71e-08;42!UBERON:0001009;2.11e-07;112!UBERON:0010523;2.71e-07;3!UBERON:0001915;2.71e-07;3!UBERON:0001280;2.71e-07;3!UBERON:0004647;2.71e-07;3!UBERON:0001982;2.71e-07;3!UBERON:0002049;9.22e-07;75!UBERON:0007798;9.22e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,1.68e-48,18;UBERON:0001986,1.68e-48,18;UBERON:0004852,1.68e-48,18;UBERON:0000487,1.12e-39,22;UBERON:0006914,6.61e-35,25;UBERON:0003915,1.61e-32,9;UBERON:0004700,1.61e-32,9;UBERON:0001917,1.61e-32,9;UBERON:0000055,6.58e-26,68;UBERON:0002049,1.60e-22,78;UBERON:0007798,1.60e-22,78;UBERON:0007500,4.42e-19,59;UBERON:0001981,4.42e-19,59;UBERON:0004537,4.42e-19,59;UBERON:0006965,4.42e-19,59;UBERON:0004535,5.87e-16,109;UBERON:0001009,1.63e-15,112;UBERON:0002066,3.35e-15,5;UBERON:0000947,3.39e-14,21;UBERON:0010191,3.39e-14,21;UBERON:0004872,1.92e-13,83;UBERON:0005800,2.49e-10,2;UBERON:0001515,2.49e-10,2;UBERON:0001281,2.72e-10,2;UBERON:0003497,2.72e-10,2;UBERON:0003909,2.72e-10,2;UBERON:0003835,2.72e-10,2;UBERON:0001473,3.85e-10,8;UBERON:0004536,3.85e-10,8;UBERON:0006558,3.85e-10,8;UBERON:0003914,2.16e-09,117;UBERON:0004573,3.73e-09,33;UBERON:0004571,3.73e-09,33;UBERON:0001638,7.16e-09,9;UBERON:0010260,7.16e-09,9;UBERON:0003920,7.16e-09,9;UBERON:0004582,7.16e-09,9;UBERON:0002465,2.72e-08,10;UBERON:0010523,2.32e-07,3;UBERON:0001915,2.32e-07,3;UBERON:0001982,2.32e-07,3;UBERON:0000490,2.63e-07,148;UBERON:0001280,2.79e-07,3;UBERON:0004647,2.79e-07,3;UBERON:0005171,2.79e-07,3;UBERON:0001637,2.99e-07,42;UBERON:0003509,2.99e-07,42;UBERON:0004572,2.99e-07,42;UBERON:0004111,8.17e-07,240 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0.816002764977012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,2.58391129576717,0.860234595106124,4.16568601929113,1.69592382577203,0.419499436209906,0,0.626984899610432,0.516833518338658,0.35576626268671,0.66944122552934,0.805658634218294,0,1.70843440283719,0.367663080345869,1.62028389576352,1.3394959242612,0.44905874525234,1.12611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4763109092493,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,4.76409277611544,0,1.71228737011138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0.140669416410513,0.111308705022906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31396051279005,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0,0.31593289814244,0,0,0.664653872707185,0,0,0,0,0,0,0,0,0,0.343972064943233,0,0,0,0,0,0,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0.429226048136571,0,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394028536495991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0.306345576763462,0,0,0,0,0,0,0,0.248385611765534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0.40341013740704,0,0,0,0,0.135075169236789,0,0,0.126831620387814,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0.135939465953663,0.197318320688547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307988420568741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0.0636471582781649,0,0,0,0,0.0717222053926763,0.332660356546013,0,0,0,0,0,0,0,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0.816002764977012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,2.58391129576717,0.860234595106124,4.16568601929113,1.69592382577203,0.419499436209906,0,0.626984899610432,0.516833518338658,0.35576626268671,0.66944122552934,0.805658634218294,0,1.70843440283719,0.367663080345869,1.62028389576352,1.3394959242612,0.44905874525234,1.12611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4763109092493,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,4.76409277611544,0,1.71228737011138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0.140669416410513,0.111308705022906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31396051279005,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0,0.31593289814244,0,0,0.664653872707185,0,0,0,0,0,0,0,0,0,0.343972064943233,0,0,0,0,0,0,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0.429226048136571,0,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394028536495991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0.306345576763462,0,0,0,0,0,0,0,0.248385611765534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0.40341013740704,0,0,0,0,0.135075169236789,0,0,0.126831620387814,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0.135939465953663,0.197318320688547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307988420568741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0.0636471582781649,0,0,0,0,0.0717222053926763,0.332660356546013,0,0,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p@chr9:133992897..133992908,+ | |short_description=p@chr9:133992897..133992908,+ | ||
}} | }} |
Latest revision as of 23:38, 31 July 2015
Short description: | p@chr9:133992897..133992908, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:133992897..133992908, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 4.23e-60 | 24 |
endothelial cell | 2.66e-49 | 36 |
blood vessel endothelial cell | 1.68e-48 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.68e-48 | 18 |
aortic endothelial cell | 1.77e-48 | 6 |
meso-epithelial cell | 2.27e-39 | 45 |
endothelial cell of artery | 1.61e-32 | 9 |
lining cell | 1.87e-30 | 58 |
barrier cell | 1.87e-30 | 58 |
endothelial cell of umbilical vein | 1.29e-24 | 3 |
mesodermal cell | 2.58e-14 | 121 |
squamous epithelial cell | 9.97e-14 | 63 |
lymphangioblast | 3.34e-13 | 6 |
endothelial cell of lymphatic vessel | 3.34e-13 | 6 |
vascular lymphangioblast | 3.34e-13 | 6 |
vein endothelial cell | 7.78e-13 | 6 |
thoracic aorta endothelial cell | 2.49e-10 | 2 |
endothelial cell of sinusoid | 2.72e-10 | 2 |
endothelial cell of hepatic sinusoid | 2.72e-10 | 2 |
capillary endothelial cell | 2.32e-07 | 3 |