FFCP PHASE1:Hg19::chr14:65170938..65170956,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr14:65170938..65170956,+
|short_description=p4@PLEKHG3
|description=CAGE_peak_4_at_PLEKHG3_5end
|association_with_transcript=-197bp_to_ENST00000247226_5end
|...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=26030 | |EntrezGene=26030 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20364 | |HGNC=20364 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-197bp_to_ENST00000247226_5end | |||
|cluster_id=chr14:65170938..65170956,+ | |||
|coexpression_cluster_id=C3444 | |||
|description=CAGE_peak_4_at_PLEKHG3_5end | |||
|id=chr14:65170938..65170956,+ | |||
|ontology_enrichment_celltype=CL:0000037!1.59e-15!172;CL:0000566!1.59e-15!172;CL:0002032!7.80e-15!165;CL:0000837!7.80e-15!165;CL:0000988!6.68e-14!182;CL:0000738!7.18e-13!140;CL:0000763!4.13e-12!112;CL:0000049!4.13e-12!112;CL:0000766!2.01e-10!76;CL:0000791!3.25e-10!18;CL:0000789!3.25e-10!18;CL:0002420!3.25e-10!18;CL:0002419!3.25e-10!18;CL:0000790!3.25e-10!18;CL:0000094!6.16e-10!8;CL:0002087!1.63e-08!119;CL:0002031!5.77e-08!124;CL:0000625!6.79e-08!11;CL:0000860!1.98e-07!45;CL:0002057!3.09e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0000094;6.49e-30;8!CL:0000791;2.06e-22;18!CL:0000789;2.06e-22;18!CL:0002419;2.06e-22;18!CL:0000081;2.24e-21;11!CL:0000625;1.47e-20;11!CL:0000084;1.74e-15;25!CL:0000623;9.29e-13;3!CL:0000775;1.00e-12;3!CL:0000226;1.35e-11;3!CL:0000842;1.35e-11;3!CL:0000767;1.68e-11;3!CL:0000771;3.44e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000094,4.16e-30,8;CL:0000791,2.36e-22,18;CL:0000789,2.36e-22,18;CL:0002420,2.36e-22,18;CL:0002419,2.36e-22,18;CL:0000790,2.36e-22,18;CL:0000081,1.63e-21,11;CL:0000625,1.46e-20,11;CL:0000738,4.72e-20,136;CL:0000037,6.56e-20,168;CL:0000988,1.82e-18,177;CL:0002032,5.38e-17,161;CL:0000837,5.38e-17,161;CL:0000084,1.91e-15,25;CL:0000827,1.91e-15,25;CL:0000775,8.79e-13,3;CL:0000623,9.87e-13,3;CL:0000825,9.87e-13,3;CL:0000767,1.28e-11,3;CL:0000226,1.33e-11,3;CL:0000842,1.33e-11,3;CL:0002087,4.23e-11,115;CL:0000838,7.90e-11,52;CL:0000542,1.45e-10,53;CL:0000051,1.45e-10,53;CL:0000771,3.31e-09,2;CL:0002031,2.50e-08,120;CL:0000766,4.03e-08,72;CL:0000763,9.32e-08,108;CL:0000049,9.32e-08,108 | |||
|ontology_enrichment_development_v019=CL:0000790;2.06e-22;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.77e-09!115;UBERON:0002390!1.67e-08!102;UBERON:0003061!1.67e-08!102;UBERON:0000178!3.77e-08!15;UBERON:0000179!3.77e-08!15;UBERON:0000463!3.77e-08!15;UBERON:0002193!1.39e-07!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.08e-23;15!UBERON:0000179;1.08e-23;15!UBERON:0000463;1.08e-23;15!UBERON:0002390;1.38e-09;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,9.60e-24,15;UBERON:0000179,9.60e-24,15;UBERON:0000463,9.60e-24,15;UBERON:0002390,7.12e-08,98;UBERON:0003061,7.12e-08,98;UBERON:0002193,1.01e-07,108 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.0821005894499457,0.236132343941038,1.57345710739562,3.83829398097213,1.39334510984468,0,0,0,0,0,0,2.21598163412751,3.20871115952227,3.47217393145363,0.223915474239924,0.971680998056939,0,1.74477886535478,0,0,0.929716147622738,0.411167888021826,0,0,0.256160706529101,0,1.03423704220986,0,1.35426486594342,0.564727018627814,0.272906150057846,0.224723484445085,0.306083892370903,0,0,0,0.398927315243264,0,0.290209238628584,0,0,0.502497330513487,0,0.217188844705117,0.605399502633369,0,0.316462387440884,0,0.425208599930087,0.628975936525128,0.673971786878971,0.450530678524519,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.983548850569165,1.17903228824749,1.85041349099558,0,0,0.473447805734733,0,3.34231370655521,0.589211814949674,1.32920336750173,1.08321545506006,4.61128751012431,1.43065282315866,0.164437904603676,1.38175008892924,0.289803085735052,0,0,0,4.19244567980995,1.14966148080576,3.09264700934367,1.26509846009751,1.27426165729639,0.651083453856419,0,2.71035214339991,2.04778577847069,0,2.60454977248419,1.64225599384209,3.02410114837099,6.68600489458768,2.46201486600758,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.27121669744253,7.75560528296651,0.436094052142534,0.496971951695318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0.860413786167011,0.121973706129595,0.132529768321485,0.116193942869518,0.310983165046111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0.245976877086227,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0,0,0,0,1.93706554829097,0.829312462163088,0.432359860250884,0.25248486685276,0.063497894292169,0,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.12279976525011,4.74380664690938,5.00537841491019,0,0,0,0,0,2.99602809578873,23.932916736322,8.70272578215674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24060815673732,1.72571360654893,4.26910231213777,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0.0920809889358963,0,0,0,0,0.15403067420883,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43050537267123,0,0,0,3.55213326462519,0,5.69647187174163,2.1440859791201,3.70226045777575,5.18778648954174,0.540031437238115,8.72437693923697,0,0,0,0,0,0,0,1.59663497146253,0,0.211673582723883,0.324621940274555,0.280797178113459,0.228234679033192,0.156679895773023,0,0,1.92705690124439,1.41259795033733,0.425846237690326,2.06103206853459,0,0.447352215784832,0,0.390776190804081,0,0,0,0,0,0.18714054040822,0.439524537815682,0.36408156524854,0,0.284136146806413,0.23874448473769,0,0,0,0,0,0,0.211125408127993,0,0,0.755798243562828,0,0.492339221844278,0,0.0898683511473268,0,0.511572370226872,0,2.3948309234694,0,0.969332746095218,0,0,0,0,0,0.341380344856499,0,0,0.344743373241465,0,0,0,0.120596438625408,0,0,0,0.219385397153973,0,0,0.0769502585037971,0,0,0.269272933229316,0,0,0,0,0,0.470940769185074,0.997270091400938,0,0,0,0,0.476809736941136,0.421996129056054,0,0,0,0.995261931078505,0.176915129006678,0,0,0,0,0.404406797884062,0,0.468528891450678,0,0.19566461893209,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0.347119476670262,0.195984794828755,0.0870592065804026,0,0,0.0967563312890851,0,0.0821154570532092,0.0969890164884194,0,0,0,0,0.189932387867636,0,0,0.213452994739353,0,0.144090417154106,0,0.514784993585894,0,0,0.235694034616795,0,0,0.101998217636322,0,0.600420288709789,0,0,0,0,0,0.229160424011684,0,0,0,0,0.0671834724867263,0,0,0.0787831823072236,0,0,0,0,0,0.136203406111576,0,0.550157746388935,0.415440338029185,0,0,0,0,0,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0,0,0,0.213574825135389,0,0.414239055347196,1.48849806543585,0,0,0,0,0,0,0,0.157054096250234,0,0.122026264901963,0,0,0.110929051536852,0.0620964029413835,0,0.124980407962107,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0.308801447160972,0,0.176689145945881,0,0,0.256241518587947,0,0,0,0,0,0.163565394255844,0,0,0.211312123358627,0,0.320075189082423,0,0,0,0,0.622077260032973,0,0.107824811396682,0,0.109209638192014,0.33946505990805,0.212574920101683,0,0,0,0,0,0,0,0.128458450192919,0,0,0,0,0.207471757392654,0,1.42769420259154,0.196295437002051,0.11796972334774,0,0.115525666150338,0,0,0,0,0,0,0.261906694481422,0,0,0.0675375846183947,0.781078098613847,0.206686796501184,0.19024743058172,0,0,0.496211178389294,0,0.255524855279191,0,0,0,0,0,0,0,0.135939465953663,0.0657727735628491,0.118193840883968,0,0.156986185701028,0.314231179832004,0.560544326627578,0,0,0,0.142953088353313,0.158013611732727,0,0,0,0,0,0,0,0,0,0.423387050190929,0.22910686854405,0,0,0,0.196300467230486,0,0,0,0,0.485710993059139,0,0.198950775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| ||
|short_description=p4@PLEKHG3 | |||
}} | }} |
Latest revision as of 01:58, 25 September 2015
Short description: | p4@PLEKHG3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PLEKHG3_5end |
Coexpression cluster: | C3444_Neutrophils_CD8_Natural_Whole_CD4_Eosinophils_Peripheral |
Association with transcript: | -197bp_to_ENST00000247226_5end |
EntrezGene: | PLEKHG3 |
HGNC: | 20364 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte | 4.16e-30 | 8 |
mature alpha-beta T cell | 2.36e-22 | 18 |
alpha-beta T cell | 2.36e-22 | 18 |
immature T cell | 2.36e-22 | 18 |
mature T cell | 2.36e-22 | 18 |
immature alpha-beta T cell | 2.36e-22 | 18 |
blood cell | 1.63e-21 | 11 |
CD8-positive, alpha-beta T cell | 1.46e-20 | 11 |
leukocyte | 4.72e-20 | 136 |
hematopoietic stem cell | 6.56e-20 | 168 |
hematopoietic cell | 1.82e-18 | 177 |
hematopoietic oligopotent progenitor cell | 5.38e-17 | 161 |
hematopoietic multipotent progenitor cell | 5.38e-17 | 161 |
T cell | 1.91e-15 | 25 |
pro-T cell | 1.91e-15 | 25 |
neutrophil | 8.79e-13 | 3 |
natural killer cell | 9.87e-13 | 3 |
pro-NK cell | 9.87e-13 | 3 |
basophil | 1.28e-11 | 3 |
single nucleate cell | 1.33e-11 | 3 |
mononuclear cell | 1.33e-11 | 3 |
nongranular leukocyte | 4.23e-11 | 115 |
lymphoid lineage restricted progenitor cell | 7.90e-11 | 52 |
lymphocyte | 1.45e-10 | 53 |
common lymphoid progenitor | 1.45e-10 | 53 |
eosinophil | 3.31e-09 | 2 |
hematopoietic lineage restricted progenitor cell | 2.50e-08 | 120 |
myeloid leukocyte | 4.03e-08 | 72 |
myeloid cell | 9.32e-08 | 108 |
common myeloid progenitor | 9.32e-08 | 108 |
Ontology term | p-value | n |
---|---|---|
blood | 9.60e-24 | 15 |
haemolymphatic fluid | 9.60e-24 | 15 |
organism substance | 9.60e-24 | 15 |
hematopoietic system | 7.12e-08 | 98 |
blood island | 7.12e-08 | 98 |
hemolymphoid system | 1.01e-07 | 108 |