FFCP PHASE1:Hg19::chr14:65346661..65346672,-: Difference between revisions
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|id=chr14:65346661..65346672,-
|short_description=p6@SPTB
|description=CAGE_peak_6_at_SPTB_5end
|association_with_transcript=-60bp_to_ENST00000556626,uc001xhs.2,uc0...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6710 | |EntrezGene=6710 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11274 | |HGNC=11274 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-60bp_to_ENST00000556626,uc001xhs.2,uc001xhu.2_5end | |||
|cluster_id=chr14:65346661..65346672,- | |||
|coexpression_cluster_id=C33 | |||
|description=CAGE_peak_6_at_SPTB_5end | |||
|id=chr14:65346661..65346672,- | |||
|ontology_enrichment_celltype=CL:0002274!3.79e-08!5;CL:0000457!3.79e-08!5;CL:0002191!3.79e-08!5;CL:0000097!3.79e-08!5;CL:0000831!3.79e-08!5;CL:0002028!3.79e-08!5 | |||
|ontology_enrichment_celltype_v019=CL:0000764;3.29e-16;2!CL:0000558;3.29e-16;2!CL:0000097;1.04e-13;5!CL:0000163;7.85e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,3.30e-16,2;CL:0000765,3.30e-16,2;CL:0000050,3.30e-16,2;CL:0000038,3.30e-16,2;CL:0000558,3.30e-16,2;CL:0000547,3.30e-16,2;CL:0000549,3.30e-16,2;CL:0000550,3.30e-16,2;CL:0000552,3.30e-16,2;CL:0000097,9.81e-14,5;CL:0002028,9.81e-14,5;CL:0000763,9.65e-09,108;CL:0000049,9.65e-09,108;CL:0000163,7.59e-08,9 | |||
|ontology_enrichment_development_v019=UBERON:0004874;2.29e-08;1 | |||
|ontology_enrichment_disease=DOID:1036!1.45e-10!8 | |||
|ontology_enrichment_disease_v019=DOID:1036;5.31e-22;8!DOID:8692;5.12e-10;31!DOID:1240;1.17e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,3.91e-22,8;DOID:8692,1.78e-10,31;DOID:1240,3.67e-08,39 | |||
|ontology_enrichment_uberon=UBERON:0007023!5.96e-28!115;UBERON:0000178!1.24e-15!15;UBERON:0000179!1.24e-15!15;UBERON:0000463!1.24e-15!15;UBERON:0001049!2.49e-12!57;UBERON:0005068!2.49e-12!57;UBERON:0006241!2.49e-12!57;UBERON:0007135!2.49e-12!57;UBERON:0003076!5.06e-10!15;UBERON:0003057!5.06e-10!15;UBERON:0002616!2.33e-09!59;UBERON:0002298!4.02e-09!8;UBERON:0000955!5.47e-08!69;UBERON:0006238!5.47e-08!69;UBERON:0004733!6.50e-08!12;UBERON:0002028!6.50e-08!12;UBERON:0007277!6.50e-08!12;UBERON:0001017!1.45e-07!82;UBERON:0002346!2.19e-07!90;UBERON:0004732!3.22e-07!13;UBERON:0003075!3.24e-07!86;UBERON:0007284!3.24e-07!86;UBERON:0000988!3.52e-07!3;UBERON:0005743!5.61e-07!86;UBERON:0001896!6.80e-07!3;UBERON:0005290!6.80e-07!3;UBERON:0010096!6.80e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000341;4.94e-15;2!UBERON:0002426;1.02e-08;1!UBERON:0003831;1.02e-08;1!UBERON:0003898;1.02e-08;1!UBERON:0004830;1.02e-08;1!UBERON:0003830;1.02e-08;1!UBERON:0005175;1.02e-08;1!UBERON:0001774;1.02e-08;1!UBERON:0001103;1.02e-08;1!UBERON:0000989;2.29e-08;1!UBERON:0008811;2.29e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000341,7.08e-15,2;UBERON:0002426,9.46e-09,1;UBERON:0003831,9.46e-09,1;UBERON:0003898,9.46e-09,1;UBERON:0004830,9.46e-09,1;UBERON:0003830,9.46e-09,1;UBERON:0005175,9.46e-09,1;UBERON:0001774,9.46e-09,1;UBERON:0001103,9.46e-09,1;UBERON:0010084,9.46e-09,1;UBERON:0000989,1.27e-08,1;UBERON:0008811,1.27e-08,1;UBERON:0006258,1.27e-08,1;UBERON:0005876,1.27e-08,1;UBERON:0004874,1.27e-08,1 | |||
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| ||
|short_description=p6@SPTB | |||
}} | }} |
Latest revision as of 02:23, 25 September 2015
Short description: | p6@SPTB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SPTB_5end |
Coexpression cluster: | C33_Reticulocytes_liver_Whole_blood_chronic_acute_spleen |
Association with transcript: | -60bp_to_ENST00000556626, uc001xhs.2, uc001xhu.2_5end |
EntrezGene: | SPTB |
HGNC: | 11274 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 3.30e-16 | 2 |
erythroblast | 3.30e-16 | 2 |
megakaryocyte-erythroid progenitor cell | 3.30e-16 | 2 |
erythroid progenitor cell | 3.30e-16 | 2 |
reticulocyte | 3.30e-16 | 2 |
proerythroblast | 3.30e-16 | 2 |
basophilic erythroblast | 3.30e-16 | 2 |
polychromatophilic erythroblast | 3.30e-16 | 2 |
orthochromatic erythroblast | 3.30e-16 | 2 |
mast cell | 9.81e-14 | 5 |
basophil mast progenitor cell | 9.81e-14 | 5 |
myeloid cell | 9.65e-09 | 108 |
common myeloid progenitor | 9.65e-09 | 108 |
endocrine cell | 7.59e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
throat | 7.08e-15 | 2 |
chest muscle | 9.46e-09 | 1 |
respiratory system muscle | 9.46e-09 | 1 |
skeletal muscle of trunk | 9.46e-09 | 1 |
respiratory system skeletal muscle | 9.46e-09 | 1 |
thoracic segment muscle | 9.46e-09 | 1 |
chest organ | 9.46e-09 | 1 |
muscle of trunk | 9.46e-09 | 1 |
diaphragm | 9.46e-09 | 1 |
future diaphragm | 9.46e-09 | 1 |
penis | 1.27e-08 | 1 |
intromittent organ | 1.27e-08 | 1 |
lateral plate mesenchyme | 1.27e-08 | 1 |
undifferentiated genital tubercle | 1.27e-08 | 1 |
somatopleure | 1.27e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 3.91e-22 | 8 |
myeloid leukemia | 1.78e-10 | 31 |
leukemia | 3.67e-08 | 39 |