FFCP PHASE1:Hg19::chr2:98963740..98963780,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:98963740..98963780,- | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_at_chr2:98963740..98963780,- | |description=CAGE_peak_at_chr2:98963740..98963780,- | ||
|id=chr2:98963740..98963780,- | |id=chr2:98963740..98963780,- | ||
|ontology_enrichment_celltype=CL:0000047!4.10e-10!8;CL:0002557!1.91e-09!1 | |ontology_enrichment_celltype=CL:0000047!4.10e-10!8;CL:0002557!1.91e-09!1 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.50e-14;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:5409;3.42e-11;4!DOID:1325;6.04e-07;7!DOID:3904;6.04e-07;7 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,3.42e-11,4;DOID:1325,6.04e-07,7;DOID:3904,6.04e-07,7 | |||
|ontology_enrichment_uberon=UBERON:0000073!9.93e-28!94;UBERON:0001016!9.93e-28!94;UBERON:0005743!1.79e-27!86;UBERON:0001017!1.50e-25!82;UBERON:0003075!1.77e-24!86;UBERON:0007284!1.77e-24!86;UBERON:0002346!2.82e-23!90;UBERON:0001905!1.73e-18!2;UBERON:0002757!1.73e-18!2;UBERON:0010134!1.73e-18!2;UBERON:0002784!1.73e-18!2;UBERON:0005408!1.73e-18!2;UBERON:0001899!1.73e-18!2;UBERON:0001049!2.37e-18!57;UBERON:0005068!2.37e-18!57;UBERON:0006241!2.37e-18!57;UBERON:0007135!2.37e-18!57;UBERON:0004121!6.76e-18!169;UBERON:0000924!2.07e-17!173;UBERON:0006601!2.07e-17!173;UBERON:0002298!1.36e-16!8;UBERON:0003076!1.50e-13!15;UBERON:0003057!1.50e-13!15;UBERON:0000955!2.94e-12!69;UBERON:0006238!2.94e-12!69;UBERON:0002616!4.01e-12!59;UBERON:0002240!4.99e-12!3;UBERON:0006331!5.58e-12!3;UBERON:0003056!7.31e-12!61;UBERON:0001896!8.68e-12!3;UBERON:0005290!8.68e-12!3;UBERON:0010096!8.68e-12!3;UBERON:0000033!1.69e-10!123;UBERON:0000153!6.62e-10!129;UBERON:0007811!6.62e-10!129;UBERON:0007023!7.22e-10!115;UBERON:0003296!1.06e-09!4;UBERON:0010133!1.06e-09!4;UBERON:0002038!1.15e-09!1;UBERON:0009661!1.15e-09!1;UBERON:0007190!2.26e-09!1;UBERON:0002336!2.46e-09!1;UBERON:0001018!2.46e-09!1;UBERON:0002473!2.46e-09!1;UBERON:0005340!2.46e-09!1;UBERON:0002316!2.46e-09!1;UBERON:0003544!2.46e-09!1;UBERON:0001020!2.46e-09!1;UBERON:0005970!2.46e-09!1;UBERON:0002437!2.46e-09!1;UBERON:0002780!6.89e-09!41;UBERON:0001890!6.89e-09!41;UBERON:0006240!6.89e-09!41;UBERON:0002308!8.76e-09!9;UBERON:0000125!8.76e-09!9;UBERON:0003080!1.16e-08!42;UBERON:0000966!7.21e-08!5;UBERON:0005388!7.21e-08!5;UBERON:0001802!7.21e-08!5;UBERON:0005174!1.46e-07!5;UBERON:0001137!1.46e-07!5;UBERON:0000970!4.98e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;1.28e-79;2!UBERON:0002757;1.28e-79;2!UBERON:0010134;1.28e-79;2!UBERON:0005408;1.28e-79;2!UBERON:0001899;1.28e-79;2!UBERON:0003296;1.64e-40;4!UBERON:0010133;1.64e-40;4!UBERON:0002784;1.64e-40;4!UBERON:0001894;1.08e-23;7!UBERON:0000966;2.86e-09;5!UBERON:0005388;2.86e-09;5!UBERON:0001802;2.86e-09;5!UBERON:0000970;6.30e-09;20!UBERON:0002104;1.50e-08;21!UBERON:0000020;6.86e-08;23!UBERON:0001032;1.34e-07;24!UBERON:0004456;1.34e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,1.56e-79,2;UBERON:0002757,1.56e-79,2;UBERON:0010134,1.56e-79,2;UBERON:0005408,1.56e-79,2;UBERON:0001899,1.56e-79,2;UBERON:0003296,1.81e-40,4;UBERON:0010133,1.81e-40,4;UBERON:0002784,1.81e-40,4;UBERON:0001894,1.14e-23,7;UBERON:0006222,1.14e-23,7;UBERON:0000970,1.48e-08,21;UBERON:0002104,1.48e-08,21;UBERON:0000966,5.92e-08,6;UBERON:0005388,5.92e-08,6;UBERON:0001802,5.92e-08,6;UBERON:0000020,1.31e-07,24;UBERON:0001032,1.31e-07,24;UBERON:0004456,1.31e-07,24 | |||
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|short_description=p@chr2:98963740..98963780,- | |short_description=p@chr2:98963740..98963780,- | ||
}} | }} |
Latest revision as of 13:30, 29 July 2015
Short description: | p@chr2:98963740..98963780, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:98963740..98963780, - |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 1.56e-79 | 2 |
regional part of epithalamus | 1.56e-79 | 2 |
secretory circumventricular organ | 1.56e-79 | 2 |
circumventricular organ | 1.56e-79 | 2 |
epithalamus | 1.56e-79 | 2 |
gland of diencephalon | 1.81e-40 | 4 |
neuroendocrine gland | 1.81e-40 | 4 |
regional part of diencephalon | 1.81e-40 | 4 |
diencephalon | 1.14e-23 | 7 |
future diencephalon | 1.14e-23 | 7 |
eye | 1.48e-08 | 21 |
visual system | 1.48e-08 | 21 |
retina | 5.92e-08 | 6 |
photoreceptor array | 5.92e-08 | 6 |
posterior segment of eyeball | 5.92e-08 | 6 |
sense organ | 1.31e-07 | 24 |
sensory system | 1.31e-07 | 24 |
entire sense organ system | 1.31e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 3.42e-11 | 4 |
bronchus cancer | 6.04e-07 | 7 |
bronchogenic carcinoma | 6.04e-07 | 7 |