FFCP PHASE1:Hg19::chr3:114464843..114464849,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:114464843..114464849,- | |||
|coexpression_cluster_id=C2079 | |||
|description=CAGE_peak_at_chr3:114464843..114464849,- | |description=CAGE_peak_at_chr3:114464843..114464849,- | ||
|id=chr3:114464843..114464849,- | |id=chr3:114464843..114464849,- | ||
|ontology_enrichment_celltype=CL:0000313!2.02e-08!1 | |ontology_enrichment_celltype=CL:0000313!2.02e-08!1 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007297;4.52e-50;2!UBERON:0003918;2.73e-11;10!UBERON:0007687;2.73e-11;10 | |||
|ontology_enrichment_disease=DOID:2152!2.02e-08!1;DOID:299!8.58e-07!25 | |ontology_enrichment_disease=DOID:2152!2.02e-08!1;DOID:299!8.58e-07!25 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003101!5.84e-11!22;UBERON:0000079!5.84e-11!22;UBERON:0003135!1.25e-10!11;UBERON:0006947!1.28e-10!3;UBERON:0004054!1.28e-10!3;UBERON:0005156!4.74e-10!59;UBERON:0000990!4.74e-10!59;UBERON:0001301!1.05e-08!1;UBERON:0001000!1.75e-08!1;UBERON:0005352!1.75e-08!1;UBERON:0004911!2.02e-08!1;UBERON:0004913!2.17e-08!1;UBERON:0003703!2.17e-08!1;UBERON:0001174!2.17e-08!1;UBERON:0004914!2.17e-08!1;UBERON:0003133!3.26e-08!48;UBERON:0005904!3.58e-08!4;UBERON:0006834!5.82e-08!1;UBERON:0001052!8.83e-08!4;UBERON:0005172!4.55e-07!55;UBERON:0005173!4.55e-07!55;UBERON:0006554!6.26e-07!44;UBERON:0004175!8.69e-07!25;UBERON:0001008!9.32e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0001301;2.55e-98;1!UBERON:0006947;5.96e-34;3!UBERON:0004054;5.96e-34;3!UBERON:0005904;7.14e-26;4!UBERON:0000058;3.02e-11;10!UBERON:0003135;2.37e-10;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001301,2.55e-98,1;UBERON:0006947,5.96e-34,3;UBERON:0004054,5.96e-34,3;UBERON:0005904,7.14e-26,4;UBERON:0002113,1.86e-16,26;UBERON:0003918,1.86e-16,26;UBERON:0011143,1.86e-16,26;UBERON:0005095,1.86e-16,26;UBERON:0007687,1.86e-16,26;UBERON:0000489,5.04e-14,31;UBERON:0005103,1.07e-13,8;UBERON:0000083,1.07e-13,8;UBERON:0009201,1.07e-13,8;UBERON:0006553,1.07e-13,8;UBERON:0003074,1.07e-13,8;UBERON:0003060,1.07e-13,8;UBERON:0000080,2.45e-12,9;UBERON:0002120,2.45e-12,9;UBERON:0004875,2.45e-12,9;UBERON:0005721,2.45e-12,9;UBERON:0005754,2.45e-12,9;UBERON:0007297,2.45e-12,9;UBERON:0003135,2.37e-10,11;UBERON:0004876,2.37e-10,11;UBERON:0006554,1.08e-09,47;UBERON:0003887,1.33e-09,12;UBERON:0001008,1.62e-09,48;UBERON:0005172,1.34e-08,54;UBERON:0005173,1.34e-08,54;UBERON:0002417,7.34e-08,60;UBERON:0000916,7.34e-08,60;UBERON:0006555,1.54e-07,16;UBERON:0004819,1.54e-07,16;UBERON:0003103,4.47e-07,68 | |||
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|short_description=p@chr3:114464843..114464849,- | |short_description=p@chr3:114464843..114464849,- | ||
}} | }} |
Latest revision as of 14:33, 29 July 2015
Short description: | p@chr3:114464843..114464849, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:114464843..114464849, - |
Coexpression cluster: | C2079_epididymis_kidney_liver_papillotubular_Hepatocyte_colon_hepatoblastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epididymis | 2.55e-98 | 1 |
male genital duct | 5.96e-34 | 3 |
internal male genitalia | 5.96e-34 | 3 |
duct of male reproductive system | 7.14e-26 | 4 |
kidney | 1.86e-16 | 26 |
kidney mesenchyme | 1.86e-16 | 26 |
upper urinary tract | 1.86e-16 | 26 |
kidney rudiment | 1.86e-16 | 26 |
kidney field | 1.86e-16 | 26 |
cavitated compound organ | 5.04e-14 | 31 |
mesonephric epithelium | 1.07e-13 | 8 |
mesonephric tubule | 1.07e-13 | 8 |
nephric duct | 1.07e-13 | 8 |
renal duct | 1.07e-13 | 8 |
mesonephric duct | 1.07e-13 | 8 |
pronephric duct | 1.07e-13 | 8 |
mesonephros | 2.45e-12 | 9 |
pronephros | 2.45e-12 | 9 |
nephrogenic cord | 2.45e-12 | 9 |
pronephric mesoderm | 2.45e-12 | 9 |
rostral part of nephrogenic cord | 2.45e-12 | 9 |
presumptive pronephric mesoderm | 2.45e-12 | 9 |
male reproductive organ | 2.37e-10 | 11 |
urogenital ridge | 2.37e-10 | 11 |
urinary system structure | 1.08e-09 | 47 |
intraembryonic coelom | 1.33e-09 | 12 |
renal system | 1.62e-09 | 48 |
abdomen element | 1.34e-08 | 54 |
abdominal segment element | 1.34e-08 | 54 |
abdominal segment of trunk | 7.34e-08 | 60 |
abdomen | 7.34e-08 | 60 |
excretory tube | 1.54e-07 | 16 |
kidney epithelium | 1.54e-07 | 16 |
compound organ | 4.47e-07 | 68 |