FFCP PHASE1:Hg19::chr14:94849340..94849371,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr14:94849340..94849371,+
|short_description=p@chr14:94849340..94849371,+
|description=CAGE_peak_at_chr14:94849340..94849371,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr14:94849340..94849371,+ | |||
|coexpression_cluster_id=C129 | |||
|description=CAGE_peak_at_chr14:94849340..94849371,+ | |||
|id=chr14:94849340..94849371,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.00e-48!42;CL:0000860!1.71e-44!45;CL:0000766!2.03e-42!76;CL:0002194!2.15e-39!63;CL:0000576!2.15e-39!63;CL:0000040!2.15e-39!63;CL:0000559!2.15e-39!63;CL:0002009!1.06e-37!65;CL:0000839!6.83e-34!70;CL:0000557!3.39e-33!71;CL:0000763!3.05e-24!112;CL:0000049!3.05e-24!112;CL:0000738!1.20e-20!140;CL:0002087!2.00e-19!119;CL:0002031!2.99e-15!124;CL:0000037!2.95e-14!172;CL:0000566!2.95e-14!172;CL:0002393!6.09e-14!9;CL:0002397!6.09e-14!9;CL:0002032!2.55e-13!165;CL:0000837!2.55e-13!165;CL:0000988!1.50e-12!182;CL:0000094!1.82e-08!8 | |||
|ontology_enrichment_celltype_v019=CL:0000576;8.22e-34;48!CL:0000860;1.44e-32;33!CL:0002057;1.44e-32;33!CL:0000473;8.93e-28;39!CL:0000234;8.93e-28;39!CL:0000766;1.30e-21;69!CL:0002393;1.48e-17;6!CL:0002397;1.48e-17;6!CL:0000875;7.11e-10;3!CL:0002396;7.11e-10;3!CL:0000182;2.42e-09;12!CL:0000763;2.24e-08;100!CL:0002087;2.60e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.97e-58,42;CL:0002057,2.97e-58,42;CL:0000473,3.37e-57,48;CL:0000234,3.37e-57,48;CL:0000766,8.29e-45,72;CL:0002194,6.17e-44,59;CL:0000576,6.17e-44,59;CL:0000040,6.17e-44,59;CL:0000559,6.17e-44,59;CL:0002009,3.16e-42,61;CL:0000839,2.11e-38,66;CL:0000557,1.05e-37,67;CL:0000763,9.66e-27,108;CL:0000049,9.66e-27,108;CL:0002393,7.98e-26,9;CL:0002397,7.98e-26,9;CL:0000738,3.23e-22,136;CL:0002087,1.60e-21,115;CL:0002031,8.38e-19,120;CL:0000037,3.96e-16,168;CL:0002032,4.57e-16,161;CL:0000837,4.57e-16,161;CL:0000988,8.05e-15,177;CL:0000875,5.70e-10,3;CL:0002396,5.70e-10,3;CL:0000182,2.43e-09,12 | |||
|ontology_enrichment_development_v019=CL:0002057;6.44e-39;42!CL:0000049;1.70e-07;108!UBERON:0004161;3.00e-07;11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!9.56e-37!102;UBERON:0003061!9.56e-37!102;UBERON:0002193!2.59e-34!112;UBERON:0002405!1.25e-33!115;UBERON:0002371!9.91e-28!80;UBERON:0001474!9.71e-25!86;UBERON:0004765!6.03e-22!101;UBERON:0001434!6.03e-22!101;UBERON:0009497!4.61e-10!25;UBERON:0000015!4.61e-10!25;UBERON:0002423!4.61e-10!25;UBERON:0006235!4.61e-10!25;UBERON:0004161!4.61e-10!25;UBERON:0003081!4.93e-09!216;UBERON:0002204!7.82e-09!167;UBERON:0009854!1.36e-08!23;UBERON:0000178!2.51e-08!15;UBERON:0000179!2.51e-08!15;UBERON:0000463!2.51e-08!15;UBERON:0005057!4.71e-08!26;UBERON:0008835!7.52e-08!22;UBERON:0003894!7.52e-08!22;UBERON:0000926!7.56e-08!448;UBERON:0004120!7.56e-08!448;UBERON:0006603!7.56e-08!448;UBERON:0000062!2.30e-07!511;UBERON:0009856!3.40e-07!26;UBERON:0002107!9.57e-07!19;UBERON:0006925!9.57e-07!19;UBERON:0008836!9.57e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.16e-11;15!UBERON:0000179;4.16e-11;15!UBERON:0000463;4.16e-11;15!UBERON:0002107;7.66e-10;19!UBERON:0006925;7.66e-10;19!UBERON:0002423;4.12e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.12e-38,98;UBERON:0003061,1.12e-38,98;UBERON:0002193,4.33e-36,108;UBERON:0002371,3.01e-32,76;UBERON:0001474,2.84e-29,82;UBERON:0002405,1.41e-26,93;UBERON:0004765,6.37e-26,90;UBERON:0001434,1.73e-22,100;UBERON:0003081,2.13e-13,203;UBERON:0000178,4.56e-11,15;UBERON:0000179,4.56e-11,15;UBERON:0000463,4.56e-11,15;UBERON:0002204,4.63e-11,167;UBERON:0002107,7.69e-10,19;UBERON:0006925,7.69e-10,19;UBERON:0008836,7.69e-10,19;UBERON:0008835,2.75e-08,22;UBERON:0003894,2.75e-08,22;UBERON:0009854,7.36e-08,23;UBERON:0007499,4.14e-07,25;UBERON:0009497,4.14e-07,25;UBERON:0000015,4.14e-07,25;UBERON:0002423,4.14e-07,25;UBERON:0006235,4.14e-07,25;UBERON:0004161,4.14e-07,25;UBERON:0009856,8.86e-07,26 | |||
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|short_description=p@chr14:94849340..94849371,+ | |||
}} | }} |
Latest revision as of 23:58, 24 July 2015
Short description: | p@chr14:94849340..94849371, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:94849340..94849371, + |
Coexpression cluster: | C129_liver_Hepatocyte_colon_duodenum_temporal_testicular_small |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.97e-58 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.97e-58 | 42 |
defensive cell | 3.37e-57 | 48 |
phagocyte | 3.37e-57 | 48 |
myeloid leukocyte | 8.29e-45 | 72 |
monopoietic cell | 6.17e-44 | 59 |
monocyte | 6.17e-44 | 59 |
monoblast | 6.17e-44 | 59 |
promonocyte | 6.17e-44 | 59 |
macrophage dendritic cell progenitor | 3.16e-42 | 61 |
myeloid lineage restricted progenitor cell | 2.11e-38 | 66 |
granulocyte monocyte progenitor cell | 1.05e-37 | 67 |
myeloid cell | 9.66e-27 | 108 |
common myeloid progenitor | 9.66e-27 | 108 |
intermediate monocyte | 7.98e-26 | 9 |
CD14-positive, CD16-positive monocyte | 7.98e-26 | 9 |
leukocyte | 3.23e-22 | 136 |
nongranular leukocyte | 1.60e-21 | 115 |
hematopoietic lineage restricted progenitor cell | 8.38e-19 | 120 |
hematopoietic stem cell | 3.96e-16 | 168 |
hematopoietic oligopotent progenitor cell | 4.57e-16 | 161 |
hematopoietic multipotent progenitor cell | 4.57e-16 | 161 |
hematopoietic cell | 8.05e-15 | 177 |
non-classical monocyte | 5.70e-10 | 3 |
CD14-low, CD16-positive monocyte | 5.70e-10 | 3 |
hepatocyte | 2.43e-09 | 12 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.12e-38 | 98 |
blood island | 1.12e-38 | 98 |
hemolymphoid system | 4.33e-36 | 108 |
bone marrow | 3.01e-32 | 76 |
bone element | 2.84e-29 | 82 |
immune system | 1.41e-26 | 93 |
skeletal element | 6.37e-26 | 90 |
skeletal system | 1.73e-22 | 100 |
lateral plate mesoderm | 2.13e-13 | 203 |
blood | 4.56e-11 | 15 |
haemolymphatic fluid | 4.56e-11 | 15 |
organism substance | 4.56e-11 | 15 |
musculoskeletal system | 4.63e-11 | 167 |
liver | 7.69e-10 | 19 |
digestive gland | 7.69e-10 | 19 |
liver bud | 7.69e-10 | 19 |
hepatic diverticulum | 2.75e-08 | 22 |
liver primordium | 2.75e-08 | 22 |
digestive tract diverticulum | 7.36e-08 | 23 |
epithelial sac | 4.14e-07 | 25 |
epithelium of foregut-midgut junction | 4.14e-07 | 25 |
anatomical boundary | 4.14e-07 | 25 |
hepatobiliary system | 4.14e-07 | 25 |
foregut-midgut junction | 4.14e-07 | 25 |
septum transversum | 4.14e-07 | 25 |
sac | 8.86e-07 | 26 |