FFCP PHASE1:Hg19::chr3:181417560..181417569,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:181417560..181417569,- | |||
|coexpression_cluster_id=C298 | |||
|description=CAGE_peak_at_chr3:181417560..181417569,- | |description=CAGE_peak_at_chr3:181417560..181417569,- | ||
|id=chr3:181417560..181417569,- | |id=chr3:181417560..181417569,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000540;6.78e-08;6!CL:0000404;6.78e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,6.34e-08,6;CL:0000031,6.34e-08,6;CL:0000404,6.34e-08,6 | |||
|ontology_enrichment_development_v019=CL:0000031;6.78e-08;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:4362;2.53e-09;5 | |||
|ontology_enrichment_disease_v019_2=DOID:4362,2.53e-09,5 | |||
|ontology_enrichment_uberon=UBERON:0001049!8.01e-63!57;UBERON:0005068!8.01e-63!57;UBERON:0006241!8.01e-63!57;UBERON:0007135!8.01e-63!57;UBERON:0001017!2.95e-58!82;UBERON:0002780!5.39e-56!41;UBERON:0001890!5.39e-56!41;UBERON:0006240!5.39e-56!41;UBERON:0005743!2.90e-55!86;UBERON:0003080!1.47e-54!42;UBERON:0002791!3.42e-53!33;UBERON:0000073!1.67e-52!94;UBERON:0001016!1.67e-52!94;UBERON:0002020!5.85e-52!34;UBERON:0003528!5.85e-52!34;UBERON:0002616!6.38e-52!59;UBERON:0001893!1.58e-51!34;UBERON:0000955!5.64e-50!69;UBERON:0006238!5.64e-50!69;UBERON:0002619!1.42e-46!22;UBERON:0000956!4.26e-46!25;UBERON:0000203!4.26e-46!25;UBERON:0001950!6.23e-45!20;UBERON:0001869!6.88e-45!32;UBERON:0003075!1.32e-42!86;UBERON:0007284!1.32e-42!86;UBERON:0002346!2.01e-40!90;UBERON:0003056!4.36e-36!61;UBERON:0004121!6.74e-32!169;UBERON:0000924!5.46e-31!173;UBERON:0006601!5.46e-31!173;UBERON:0000033!1.57e-29!123;UBERON:0000153!7.56e-28!129;UBERON:0007811!7.56e-28!129;UBERON:0007023!7.32e-24!115;UBERON:0001871!1.30e-19!7;UBERON:0002021!3.64e-15!5;UBERON:0000025!3.69e-15!194;UBERON:0002771!1.09e-13!3;UBERON:0004111!7.13e-12!241;UBERON:0000200!8.49e-12!6;UBERON:0003076!3.66e-10!15;UBERON:0003057!3.66e-10!15;UBERON:0000477!9.40e-10!286;UBERON:0000483!2.43e-09!309;UBERON:0000119!3.51e-09!312;UBERON:0000475!5.87e-09!365;UBERON:0002298!6.25e-09!8;UBERON:0000349!7.47e-09!5;UBERON:0000064!1.13e-08!219;UBERON:0001872!1.14e-08!5;UBERON:0002308!2.32e-08!9;UBERON:0000125!2.32e-08!9;UBERON:0002420!2.50e-08!9;UBERON:0007245!2.50e-08!9;UBERON:0010009!2.50e-08!9;UBERON:0010011!2.50e-08!9;UBERON:0000454!2.50e-08!9;UBERON:0002240!2.81e-07!3;UBERON:0006331!4.71e-07!3;UBERON:0000988!6.75e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002021;2.34e-32;5!UBERON:0001950;9.85e-18;20!UBERON:0002619;2.85e-16;22!UBERON:0000956;1.70e-14;25!UBERON:0000203;1.70e-14;25!UBERON:0002791;5.18e-11;32!UBERON:0001869;9.34e-11;32!UBERON:0003528;4.05e-10;34!UBERON:0002020;4.05e-10;34!UBERON:0001872;2.74e-09;5!UBERON:0001893;7.71e-09;34!UBERON:0002780;1.88e-08;41!UBERON:0001890;1.88e-08;41!UBERON:0000002;5.54e-08;6!UBERON:0001560;5.54e-08;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,2.74e-32,5;UBERON:0001950,1.04e-17,20;UBERON:0002619,3.01e-16,22;UBERON:0000956,1.78e-14,25;UBERON:0000203,1.78e-14,25;UBERON:0002791,1.38e-11,32;UBERON:0001869,1.38e-11,32;UBERON:0003528,5.68e-11,34;UBERON:0002020,5.68e-11,34;UBERON:0001893,5.68e-11,34;UBERON:0001872,2.74e-09,5;UBERON:0002780,2.82e-09,41;UBERON:0001890,2.82e-09,41;UBERON:0003080,2.82e-09,41;UBERON:0006240,2.82e-09,41;UBERON:0001017,2.75e-08,81;UBERON:0000002,5.54e-08,6;UBERON:0001560,5.54e-08,6;UBERON:0001016,1.56e-07,89;UBERON:0000073,2.22e-07,53;UBERON:0002616,2.22e-07,53;UBERON:0001049,4.98e-07,56;UBERON:0005068,4.98e-07,56;UBERON:0006241,4.98e-07,56;UBERON:0007135,4.98e-07,56 | |||
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| ||
|short_description=p@chr3:181417560..181417569,- | |short_description=p@chr3:181417560..181417569,- | ||
}} | }} |
Latest revision as of 18:35, 29 July 2015
Short description: | p@chr3:181417560..181417569, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:181417560..181417569, - |
Coexpression cluster: | C298_small_optic_substantia_thalamus_diencephalon_globus_occipital |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 6.34e-08 | 6 |
neuroblast | 6.34e-08 | 6 |
electrically signaling cell | 6.34e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
occipital lobe | 2.74e-32 | 5 |
neocortex | 1.04e-17 | 20 |
regional part of cerebral cortex | 3.01e-16 | 22 |
cerebral cortex | 1.78e-14 | 25 |
pallium | 1.78e-14 | 25 |
regional part of telencephalon | 1.38e-11 | 32 |
cerebral hemisphere | 1.38e-11 | 32 |
brain grey matter | 5.68e-11 | 34 |
gray matter | 5.68e-11 | 34 |
telencephalon | 5.68e-11 | 34 |
parietal lobe | 2.74e-09 | 5 |
regional part of forebrain | 2.82e-09 | 41 |
forebrain | 2.82e-09 | 41 |
anterior neural tube | 2.82e-09 | 41 |
future forebrain | 2.82e-09 | 41 |
central nervous system | 2.75e-08 | 81 |
uterine cervix | 5.54e-08 | 6 |
neck of organ | 5.54e-08 | 6 |
nervous system | 1.56e-07 | 89 |
regional part of nervous system | 2.22e-07 | 53 |
regional part of brain | 2.22e-07 | 53 |
neural tube | 4.98e-07 | 56 |
neural rod | 4.98e-07 | 56 |
future spinal cord | 4.98e-07 | 56 |
neural keel | 4.98e-07 | 56 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 2.53e-09 | 5 |