FFCP PHASE1:Hg19::chr5:150638810..150638853,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2760 | |EntrezGene=2760 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=4367 | |HGNC=4367 | ||
|TSSclassifier=strong | |||
|UniProt=Q14427 | |UniProt=Q14427 | ||
|association_with_transcript=-462bp_to_uc003ltt.1_5end | |association_with_transcript=-462bp_to_uc003ltt.1_5end | ||
|cluster_id=chr5:150638810..150638853,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_16_at_GM2A_5end | |description=CAGE_peak_16_at_GM2A_5end | ||
|id=chr5:150638810..150638853,+ | |id=chr5:150638810..150638853,+ | ||
|ontology_enrichment_celltype=CL:0002057!1.57e-85!42;CL:0000860!1.56e-79!45;CL:0002194!1.77e-69!63;CL:0000576!1.77e-69!63;CL:0000040!1.77e-69!63;CL:0000559!1.77e-69!63;CL:0002009!3.14e-67!65;CL:0000839!5.78e-67!70;CL:0000766!5.03e-66!76;CL:0000557!5.73e-66!71;CL:0000763!1.93e-43!112;CL:0000049!1.93e-43!112;CL:0002031!6.08e-36!124;CL:0002087!8.06e-35!119;CL:0000738!7.84e-34!140;CL:0002032!5.53e-28!165;CL:0000837!5.53e-28!165;CL:0000037!1.20e-26!172;CL:0000566!1.20e-26!172;CL:0000988!6.47e-25!182;CL:0000134!3.77e-10!358;CL:0002320!7.46e-10!365;CL:0000219!8.30e-09!390;CL:0000034!5.71e-08!444;CL:0000048!1.49e-07!430;CL:0000723!2.25e-07!436;CL:0002393!5.44e-07!9;CL:0002397!5.44e-07!9 | |ontology_enrichment_celltype=CL:0002057!1.57e-85!42;CL:0000860!1.56e-79!45;CL:0002194!1.77e-69!63;CL:0000576!1.77e-69!63;CL:0000040!1.77e-69!63;CL:0000559!1.77e-69!63;CL:0002009!3.14e-67!65;CL:0000839!5.78e-67!70;CL:0000766!5.03e-66!76;CL:0000557!5.73e-66!71;CL:0000763!1.93e-43!112;CL:0000049!1.93e-43!112;CL:0002031!6.08e-36!124;CL:0002087!8.06e-35!119;CL:0000738!7.84e-34!140;CL:0002032!5.53e-28!165;CL:0000837!5.53e-28!165;CL:0000037!1.20e-26!172;CL:0000566!1.20e-26!172;CL:0000988!6.47e-25!182;CL:0000134!3.77e-10!358;CL:0002320!7.46e-10!365;CL:0000219!8.30e-09!390;CL:0000034!5.71e-08!444;CL:0000048!1.49e-07!430;CL:0000723!2.25e-07!436;CL:0002393!5.44e-07!9;CL:0002397!5.44e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.37e-90;33!CL:0002057;4.37e-90;33!CL:0000473;8.00e-62;39!CL:0000234;8.00e-62;39!CL:0000576;4.77e-53;48!CL:0000766;5.81e-34;69!CL:0002087;1.20e-17;104!CL:0002393;7.05e-14;6!CL:0002397;7.05e-14;6!CL:0000763;2.27e-13;100!CL:0000738;4.97e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.25e-101,42;CL:0002057,4.25e-101,42;CL:0000473,3.98e-88,48;CL:0000234,3.98e-88,48;CL:0002194,5.89e-70,59;CL:0000576,5.89e-70,59;CL:0000040,5.89e-70,59;CL:0000559,5.89e-70,59;CL:0002009,1.31e-67,61;CL:0000839,2.33e-62,66;CL:0000557,2.12e-61,67;CL:0000766,5.28e-57,72;CL:0000763,3.11e-37,108;CL:0000049,3.11e-37,108;CL:0002087,8.22e-35,115;CL:0002031,2.98e-33,120;CL:0000738,5.04e-29,136;CL:0002032,4.40e-24,161;CL:0000837,4.40e-24,161;CL:0000037,5.84e-23,168;CL:0000988,1.21e-21,177;CL:0002393,1.95e-09,9;CL:0002397,1.95e-09,9;CL:0000134,2.93e-09,354;CL:0002320,5.13e-09,361;CL:0000219,3.71e-08,386;CL:0000048,4.21e-07,427;CL:0000723,5.89e-07,433;CL:0000034,9.09e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;4.76e-72;42!CL:0000049;3.62e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!4.16e-58!80;UBERON:0001474!9.08e-54!86;UBERON:0004765!3.77e-45!101;UBERON:0001434!3.77e-45!101;UBERON:0002390!1.15e-44!102;UBERON:0003061!1.15e-44!102;UBERON:0002193!2.79e-40!112;UBERON:0002405!4.12e-39!115;UBERON:0002204!1.79e-25!167;UBERON:0003081!3.37e-20!216;UBERON:0002384!1.89e-09!375;UBERON:0002146!1.87e-07!1;UBERON:0005623!1.87e-07!1;UBERON:0000926!5.05e-07!448;UBERON:0004120!5.05e-07!448;UBERON:0006603!5.05e-07!448 | |ontology_enrichment_uberon=UBERON:0002371!4.16e-58!80;UBERON:0001474!9.08e-54!86;UBERON:0004765!3.77e-45!101;UBERON:0001434!3.77e-45!101;UBERON:0002390!1.15e-44!102;UBERON:0003061!1.15e-44!102;UBERON:0002193!2.79e-40!112;UBERON:0002405!4.12e-39!115;UBERON:0002204!1.79e-25!167;UBERON:0003081!3.37e-20!216;UBERON:0002384!1.89e-09!375;UBERON:0002146!1.87e-07!1;UBERON:0005623!1.87e-07!1;UBERON:0000926!5.05e-07!448;UBERON:0004120!5.05e-07!448;UBERON:0006603!5.05e-07!448 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.75e-54,76;UBERON:0001474,8.50e-50,82;UBERON:0004765,3.61e-45,90;UBERON:0002405,1.23e-43,93;UBERON:0002390,2.75e-41,98;UBERON:0003061,2.75e-41,98;UBERON:0001434,2.06e-40,100;UBERON:0002193,3.11e-37,108;UBERON:0002204,4.09e-23,167;UBERON:0003081,1.71e-18,203;UBERON:0000926,8.25e-11,315;UBERON:0004120,8.25e-11,315;UBERON:0006603,8.25e-11,315;UBERON:0002384,1.10e-08,371 | |||
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|short_description=p16@GM2A | |short_description=p16@GM2A | ||
}} | }} |
Latest revision as of 08:38, 16 September 2015
Short description: | p16@GM2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_GM2A_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -462bp_to_uc003ltt.1_5end |
EntrezGene: | GM2A |
HGNC: | 4367 |
UniProt: | Q14427 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 4.25e-101 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.25e-101 | 42 |
defensive cell | 3.98e-88 | 48 |
phagocyte | 3.98e-88 | 48 |
monopoietic cell | 5.89e-70 | 59 |
monocyte | 5.89e-70 | 59 |
monoblast | 5.89e-70 | 59 |
promonocyte | 5.89e-70 | 59 |
macrophage dendritic cell progenitor | 1.31e-67 | 61 |
myeloid lineage restricted progenitor cell | 2.33e-62 | 66 |
granulocyte monocyte progenitor cell | 2.12e-61 | 67 |
myeloid leukocyte | 5.28e-57 | 72 |
myeloid cell | 3.11e-37 | 108 |
common myeloid progenitor | 3.11e-37 | 108 |
nongranular leukocyte | 8.22e-35 | 115 |
hematopoietic lineage restricted progenitor cell | 2.98e-33 | 120 |
leukocyte | 5.04e-29 | 136 |
hematopoietic oligopotent progenitor cell | 4.40e-24 | 161 |
hematopoietic multipotent progenitor cell | 4.40e-24 | 161 |
hematopoietic stem cell | 5.84e-23 | 168 |
hematopoietic cell | 1.21e-21 | 177 |
intermediate monocyte | 1.95e-09 | 9 |
CD14-positive, CD16-positive monocyte | 1.95e-09 | 9 |
mesenchymal cell | 2.93e-09 | 354 |
connective tissue cell | 5.13e-09 | 361 |
motile cell | 3.71e-08 | 386 |
multi fate stem cell | 4.21e-07 | 427 |
somatic stem cell | 5.89e-07 | 433 |
stem cell | 9.09e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.75e-54 | 76 |
bone element | 8.50e-50 | 82 |
skeletal element | 3.61e-45 | 90 |
immune system | 1.23e-43 | 93 |
hematopoietic system | 2.75e-41 | 98 |
blood island | 2.75e-41 | 98 |
skeletal system | 2.06e-40 | 100 |
hemolymphoid system | 3.11e-37 | 108 |
musculoskeletal system | 4.09e-23 | 167 |
lateral plate mesoderm | 1.71e-18 | 203 |
mesoderm | 8.25e-11 | 315 |
mesoderm-derived structure | 8.25e-11 | 315 |
presumptive mesoderm | 8.25e-11 | 315 |
connective tissue | 1.10e-08 | 371 |