FFCP PHASE1:Hg19::chr6:129420285..129420293,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:129420285..129420293,+ | |||
|description=CAGE_peak_at_chr6:129420285..129420293,+ | |description=CAGE_peak_at_chr6:129420285..129420293,+ | ||
|id=chr6:129420285..129420293,+ | |id=chr6:129420285..129420293,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000515;1.43e-11;3!CL:0000056;6.72e-09;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000515,1.08e-08,4 | |||
|ontology_enrichment_development_v019=UBERON:0005062;1.64e-19;4!UBERON:0007284;1.64e-19;4!UBERON:0004140;9.41e-10;1!UBERON:0005425;2.65e-09;1!UBERON:0004874;2.65e-09;1!CL:0000515;6.72e-09;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.92e-29!115;UBERON:0001017!1.24e-12!82;UBERON:0005743!2.80e-12!86;UBERON:0002616!1.15e-11!59;UBERON:0000073!1.37e-11!94;UBERON:0001016!1.37e-11!94;UBERON:0001049!1.26e-10!57;UBERON:0005068!1.26e-10!57;UBERON:0006241!1.26e-10!57;UBERON:0007135!1.26e-10!57;UBERON:0000955!9.76e-10!69;UBERON:0006238!9.76e-10!69;UBERON:0002346!1.54e-09!90;UBERON:0003075!3.82e-09!86;UBERON:0007284!3.82e-09!86;UBERON:0003080!1.86e-07!42;UBERON:0000475!2.16e-07!365;UBERON:0001893!5.11e-07!34;UBERON:0002020!7.09e-07!34;UBERON:0003528!7.09e-07!34;UBERON:0002780!8.16e-07!41;UBERON:0001890!8.16e-07!41;UBERON:0006240!8.16e-07!41;UBERON:0000924!9.85e-07!173;UBERON:0006601!9.85e-07!173 | |ontology_enrichment_uberon=UBERON:0007023!3.92e-29!115;UBERON:0001017!1.24e-12!82;UBERON:0005743!2.80e-12!86;UBERON:0002616!1.15e-11!59;UBERON:0000073!1.37e-11!94;UBERON:0001016!1.37e-11!94;UBERON:0001049!1.26e-10!57;UBERON:0005068!1.26e-10!57;UBERON:0006241!1.26e-10!57;UBERON:0007135!1.26e-10!57;UBERON:0000955!9.76e-10!69;UBERON:0006238!9.76e-10!69;UBERON:0002346!1.54e-09!90;UBERON:0003075!3.82e-09!86;UBERON:0007284!3.82e-09!86;UBERON:0003080!1.86e-07!42;UBERON:0000475!2.16e-07!365;UBERON:0001893!5.11e-07!34;UBERON:0002020!7.09e-07!34;UBERON:0003528!7.09e-07!34;UBERON:0002780!8.16e-07!41;UBERON:0001890!8.16e-07!41;UBERON:0006240!8.16e-07!41;UBERON:0000924!9.85e-07!173;UBERON:0006601!9.85e-07!173 | ||
|ontology_enrichment_uberon_v019=UBERON:0003978;8.40e-26;3!UBERON:0000946;8.40e-26;3!UBERON:0002133;7.03e-18;2!UBERON:0002134;7.95e-10;1!UBERON:0005208;7.95e-10;1!UBERON:0004145;7.95e-10;1!UBERON:0005946;7.95e-10;1!UBERON:0005965;7.95e-10;1!UBERON:0002078;7.95e-10;1!UBERON:0002135;8.65e-10;1!UBERON:0002146;1.07e-09;1!UBERON:0005623;1.07e-09;1!UBERON:0005795;2.65e-09;1!UBERON:0006834;2.65e-09;1!UBERON:0000989;2.65e-09;1!UBERON:0000941;2.65e-09;1!UBERON:0001785;2.65e-09;1!UBERON:0002464;2.65e-09;1!UBERON:0004904;2.65e-09;1!UBERON:0008811;2.65e-09;1!UBERON:0001021;2.65e-09;1!UBERON:0007100;3.22e-08;25!UBERON:0010313;4.14e-08;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003978,8.13e-26,3;UBERON:0009751,8.13e-26,3;UBERON:0000946,8.13e-26,3;UBERON:0002523,8.13e-26,3;UBERON:0005983,8.13e-26,3;UBERON:0002165,8.13e-26,3;UBERON:0002062,8.13e-26,3;UBERON:0007280,8.13e-26,3;UBERON:0002133,7.07e-18,2;UBERON:0004797,2.17e-11,7;UBERON:0002134,7.98e-10,1;UBERON:0005208,7.98e-10,1;UBERON:0005946,7.98e-10,1;UBERON:0005965,7.98e-10,1;UBERON:0002078,7.98e-10,1;UBERON:0002135,8.68e-10,1;UBERON:0002146,1.03e-09,1;UBERON:0005623,1.03e-09,1;UBERON:0000989,1.69e-09,1;UBERON:0008811,1.69e-09,1;UBERON:0006258,1.69e-09,1;UBERON:0005876,1.69e-09,1;UBERON:0004874,1.69e-09,1;UBERON:0000941,1.99e-09,1;UBERON:0001785,1.99e-09,1;UBERON:0002464,1.99e-09,1;UBERON:0004904,1.99e-09,1;UBERON:0001021,1.99e-09,1;UBERON:0003902,1.99e-09,1;UBERON:0005425,1.99e-09,1;UBERON:0006834,4.50e-09,1;UBERON:0010313,4.10e-08,10;UBERON:0002342,4.10e-08,10;UBERON:0005062,4.10e-08,10;UBERON:0007100,1.36e-07,27;UBERON:0007023,9.45e-07,114 | |||
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| ||
|short_description=p@chr6:129420285..129420293,+ | |short_description=p@chr6:129420285..129420293,+ | ||
}} | }} |
Latest revision as of 19:17, 30 July 2015
Short description: | p@chr6:129420285..129420293, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:129420285..129420293, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skeletal muscle myoblast | 1.08e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
valve | 8.13e-26 | 3 |
cardiac mesenchyme | 8.13e-26 | 3 |
cardial valve | 8.13e-26 | 3 |
tunica intima | 8.13e-26 | 3 |
heart layer | 8.13e-26 | 3 |
endocardium | 8.13e-26 | 3 |
endocardial cushion | 8.13e-26 | 3 |
presumptive endocardium | 8.13e-26 | 3 |
atrioventricular valve | 7.07e-18 | 2 |
blood vessel layer | 2.17e-11 | 7 |
tricuspid valve | 7.98e-10 | 1 |
right atrium valve | 7.98e-10 | 1 |
outflow tract of atrium | 7.98e-10 | 1 |
outflow part of right atrium | 7.98e-10 | 1 |
right cardiac atrium | 7.98e-10 | 1 |
mitral valve | 8.68e-10 | 1 |
pulmonary valve | 1.03e-09 | 1 |
semi-lunar valve | 1.03e-09 | 1 |
penis | 1.69e-09 | 1 |
intromittent organ | 1.69e-09 | 1 |
lateral plate mesenchyme | 1.69e-09 | 1 |
undifferentiated genital tubercle | 1.69e-09 | 1 |
somatopleure | 1.69e-09 | 1 |
cranial nerve II | 1.99e-09 | 1 |
cranial nerve | 1.99e-09 | 1 |
nerve trunk | 1.99e-09 | 1 |
nerve connecting eye with brain | 1.99e-09 | 1 |
nerve | 1.99e-09 | 1 |
retinal neural layer | 1.99e-09 | 1 |
presumptive neural retina | 1.99e-09 | 1 |
uterus or analog | 4.50e-09 | 1 |
neural crest-derived structure | 4.10e-08 | 10 |
neural crest | 4.10e-08 | 10 |
neural fold | 4.10e-08 | 10 |
primary circulatory organ | 1.36e-07 | 27 |
adult organism | 9.45e-07 | 114 |