FFCP PHASE1:Hg19::chr6:152489426..152489452,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23345 | |EntrezGene=23345 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17089 | |HGNC=17089 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-11bp_to_ENST00000460912_5end | |association_with_transcript=-11bp_to_ENST00000460912_5end | ||
|cluster_id=chr6:152489426..152489452,- | |||
|coexpression_cluster_id=C56 | |||
|description=CAGE_peak_19_at_SYNE1_5end | |description=CAGE_peak_19_at_SYNE1_5end | ||
|id=chr6:152489426..152489452,- | |id=chr6:152489426..152489452,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004140;7.03e-13;1!UBERON:0010227;7.89e-13;1!UBERON:0010226;1.25e-12;1!UBERON:0000358;2.91e-12;1!UBERON:0005062;5.70e-12;4!UBERON:0007284;5.70e-12;4!UBERON:0008814;9.27e-07;2!UBERON:0010056;9.27e-07;2 | |||
|ontology_enrichment_disease=DOID:114!1.01e-12!2;DOID:178!5.14e-07!1;DOID:326!5.14e-07!1;DOID:3978!5.14e-07!1;DOID:3394!5.14e-07!1;DOID:5844!5.14e-07!1;DOID:1287!8.95e-07!4 | |||
|ontology_enrichment_disease_v019=DOID:114;7.20e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,6.80e-07,2 | |||
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|short_description=p19@SYNE1 | |short_description=p19@SYNE1 | ||
}} | }} |
Latest revision as of 06:15, 16 September 2015
Short description: | p19@SYNE1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_SYNE1_5end |
Coexpression cluster: | C56_heart_left_umbilical_skeletal_penis_diaphragm_tongue |
Association with transcript: | -11bp_to_ENST00000460912_5end |
EntrezGene: | SYNE1 |
HGNC: | 17089 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
heart disease | 6.80e-07 | 2 |