FFCP PHASE1:Hg19::chr7:35293665..35293680,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57057 | |EntrezGene=57057 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11598 | |HGNC=11598 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UMR3 | |UniProt=Q9UMR3 | ||
|association_with_transcript=30bp_to_NM_001077653,NM_001166220_5end | |association_with_transcript=30bp_to_NM_001077653,NM_001166220_5end | ||
|cluster_id=chr7:35293665..35293680,- | |||
|coexpression_cluster_id=C56 | |||
|description=CAGE_peak_2_at_TBX20_5end | |description=CAGE_peak_2_at_TBX20_5end | ||
|id=chr7:35293665..35293680,- | |id=chr7:35293665..35293680,- | ||
|ontology_enrichment_celltype=CL:0002494!2.60e-13!16;CL:0000222!5.36e-08!119;CL:0002548!1.53e-07!6;CL:0000187!8.03e-07!54;CL:0000077!9.45e-07!19 | |ontology_enrichment_celltype=CL:0002494!2.60e-13!16;CL:0000222!5.36e-08!119;CL:0002548!1.53e-07!6;CL:0000187!8.03e-07!54;CL:0000077!9.45e-07!19 | ||
|ontology_enrichment_celltype_v019=CL:0002548;1.31e-11;6!CL:0002494;6.38e-08;16!CL:0002569;8.62e-08;6!CL:0002195;3.40e-07;2!CL:0002571;3.40e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002548,1.27e-11,6;CL:0002494,5.81e-08,16;CL:0002569,1.02e-07,6;CL:0002195,2.62e-07,2;CL:0002571,2.62e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;7.42e-07;2 | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!5.44e-23!27;UBERON:0001009!2.06e-20!113;UBERON:0000948!9.19e-20!24;UBERON:0005498!9.19e-20!24;UBERON:0004140!9.19e-20!24;UBERON:0009881!9.19e-20!24;UBERON:0004141!9.19e-20!24;UBERON:0003084!9.19e-20!24;UBERON:0007005!9.19e-20!24;UBERON:0004139!9.19e-20!24;UBERON:0004291!9.19e-20!24;UBERON:0004872!3.69e-19!84;UBERON:0004535!3.25e-18!110;UBERON:0003914!9.56e-16!118;UBERON:0001981!2.77e-10!60;UBERON:0007500!2.77e-10!60;UBERON:0004537!2.77e-10!60;UBERON:0006965!2.77e-10!60;UBERON:0002049!9.92e-10!79;UBERON:0007798!9.92e-10!79;UBERON:0001637!1.33e-09!42;UBERON:0003509!1.33e-09!42;UBERON:0004572!1.33e-09!42;UBERON:0000947!6.18e-09!21;UBERON:0010191!6.18e-09!21;UBERON:0003103!6.50e-09!69;UBERON:0000055!2.69e-08!69;UBERON:0004573!3.89e-07!33;UBERON:0004571!3.89e-07!33;UBERON:0002331!9.22e-07!10;UBERON:0000358!9.22e-07!10;UBERON:0000307!9.22e-07!10;UBERON:0000091!9.22e-07!10;UBERON:0000087!9.22e-07!10;UBERON:0007806!9.22e-07!10;UBERON:0008780!9.22e-07!10;UBERON:0005728!9.22e-07!10 | |ontology_enrichment_uberon=UBERON:0007100!5.44e-23!27;UBERON:0001009!2.06e-20!113;UBERON:0000948!9.19e-20!24;UBERON:0005498!9.19e-20!24;UBERON:0004140!9.19e-20!24;UBERON:0009881!9.19e-20!24;UBERON:0004141!9.19e-20!24;UBERON:0003084!9.19e-20!24;UBERON:0007005!9.19e-20!24;UBERON:0004139!9.19e-20!24;UBERON:0004291!9.19e-20!24;UBERON:0004872!3.69e-19!84;UBERON:0004535!3.25e-18!110;UBERON:0003914!9.56e-16!118;UBERON:0001981!2.77e-10!60;UBERON:0007500!2.77e-10!60;UBERON:0004537!2.77e-10!60;UBERON:0006965!2.77e-10!60;UBERON:0002049!9.92e-10!79;UBERON:0007798!9.92e-10!79;UBERON:0001637!1.33e-09!42;UBERON:0003509!1.33e-09!42;UBERON:0004572!1.33e-09!42;UBERON:0000947!6.18e-09!21;UBERON:0010191!6.18e-09!21;UBERON:0003103!6.50e-09!69;UBERON:0000055!2.69e-08!69;UBERON:0004573!3.89e-07!33;UBERON:0004571!3.89e-07!33;UBERON:0002331!9.22e-07!10;UBERON:0000358!9.22e-07!10;UBERON:0000307!9.22e-07!10;UBERON:0000091!9.22e-07!10;UBERON:0000087!9.22e-07!10;UBERON:0007806!9.22e-07!10;UBERON:0008780!9.22e-07!10;UBERON:0005728!9.22e-07!10 | ||
|ontology_enrichment_uberon_v019=UBERON:0007100;1.45e-23;25!UBERON:0000948;3.22e-17;22!UBERON:0003422;8.62e-08;6!UBERON:0002331;8.11e-07;10!UBERON:0001009;8.42e-07;112 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.45e-24,27;UBERON:0000948,2.78e-18,24;UBERON:0005498,2.78e-18,24;UBERON:0004140,2.78e-18,24;UBERON:0009881,2.78e-18,24;UBERON:0004141,2.78e-18,24;UBERON:0003084,2.78e-18,24;UBERON:0007005,2.78e-18,24;UBERON:0004139,2.78e-18,24;UBERON:0004291,2.78e-18,24;UBERON:0001009,7.47e-18,112;UBERON:0004872,1.46e-16,83;UBERON:0004535,1.72e-14,109;UBERON:0003914,2.54e-14,117;UBERON:0003103,1.96e-08,68;UBERON:0003422,1.02e-07,6;UBERON:0000025,1.19e-07,192;UBERON:0003104,1.82e-07,160;UBERON:0009142,1.82e-07,160;UBERON:0002049,2.42e-07,78;UBERON:0007798,2.42e-07,78;UBERON:0007500,2.65e-07,59;UBERON:0001981,2.65e-07,59;UBERON:0004537,2.65e-07,59;UBERON:0006965,2.65e-07,59;UBERON:0004111,7.79e-07,240 | |||
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| ||
|short_description=p2@TBX20 | |short_description=p2@TBX20 | ||
}} | }} |
Latest revision as of 09:07, 18 September 2015
Short description: | p2@TBX20 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TBX20_5end |
Coexpression cluster: | C56_heart_left_umbilical_skeletal_penis_diaphragm_tongue |
Association with transcript: | 30bp_to_NM_001077653, NM_001166220_5end |
EntrezGene: | TBX20 |
HGNC: | 11598 |
UniProt: | Q9UMR3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac fibroblast | 1.27e-11 | 6 |
cardiocyte | 5.81e-08 | 16 |
mesenchymal stem cell of umbilical cord | 1.02e-07 | 6 |
hepatic stem cell | 2.62e-07 | 2 |
hepatic mesenchymal stem cell | 2.62e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 1.45e-24 | 27 |
heart | 2.78e-18 | 24 |
primitive heart tube | 2.78e-18 | 24 |
primary heart field | 2.78e-18 | 24 |
anterior lateral plate mesoderm | 2.78e-18 | 24 |
heart tube | 2.78e-18 | 24 |
heart primordium | 2.78e-18 | 24 |
cardiac mesoderm | 2.78e-18 | 24 |
cardiogenic plate | 2.78e-18 | 24 |
heart rudiment | 2.78e-18 | 24 |
circulatory system | 7.47e-18 | 112 |
splanchnic layer of lateral plate mesoderm | 1.46e-16 | 83 |
cardiovascular system | 1.72e-14 | 109 |
epithelial tube | 2.54e-14 | 117 |
compound organ | 1.96e-08 | 68 |
mesenchyme of umbilical cord | 1.02e-07 | 6 |
tube | 1.19e-07 | 192 |
mesenchyme | 1.82e-07 | 160 |
entire embryonic mesenchyme | 1.82e-07 | 160 |
vasculature | 2.42e-07 | 78 |
vascular system | 2.42e-07 | 78 |
epithelial tube open at both ends | 2.65e-07 | 59 |
blood vessel | 2.65e-07 | 59 |
blood vasculature | 2.65e-07 | 59 |
vascular cord | 2.65e-07 | 59 |
anatomical conduit | 7.79e-07 | 240 |