FFCP PHASE1:Hg19::chr7:5609944..5609958,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:5609944..5609958,+ | |||
|description=CAGE_peak_at_chr7:5609944..5609958,+ | |description=CAGE_peak_at_chr7:5609944..5609958,+ | ||
|id=chr7:5609944..5609958,+ | |id=chr7:5609944..5609958,+ | ||
|ontology_enrichment_celltype=CL:0000115!8.02e-12!35;CL:0000071!1.08e-10!18;CL:0002546!1.08e-10!18;CL:0002139!1.09e-10!24;CL:0002078!2.39e-09!44;CL:0002321!1.66e-08!248;CL:0000213!2.44e-08!57;CL:0000215!2.44e-08!57;CL:0000066!2.52e-08!254;CL:0000220!3.59e-08!246 | |ontology_enrichment_celltype=CL:0000115!8.02e-12!35;CL:0000071!1.08e-10!18;CL:0002546!1.08e-10!18;CL:0002139!1.09e-10!24;CL:0002078!2.39e-09!44;CL:0002321!1.66e-08!248;CL:0000213!2.44e-08!57;CL:0000215!2.44e-08!57;CL:0000066!2.52e-08!254;CL:0000220!3.59e-08!246 | ||
|ontology_enrichment_celltype_v019=CL:0000071;2.28e-18;18!CL:0000115;2.74e-16;36!CL:0002139;4.90e-16;24!CL:0002188;5.05e-12;5!CL:0002078;3.23e-11;45!CL:0000213;3.27e-10;58!CL:0000215;3.27e-10;58!CL:0000540;6.28e-10;6!CL:0000404;6.28e-10;6!CL:1000413;1.30e-09;9!CL:1000746;1.35e-08;7!CL:1000612;1.35e-08;7!CL:0000333;9.00e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,2.05e-19,36;CL:0000071,8.91e-19,18;CL:0002546,8.91e-19,18;CL:0002139,3.00e-16,24;CL:0002078,8.35e-15,45;CL:0000213,2.66e-12,58;CL:0000215,2.66e-12,58;CL:0002188,4.05e-12,5;CL:0000540,4.72e-10,6;CL:0000031,4.72e-10,6;CL:0000404,4.72e-10,6;CL:1000413,6.75e-10,9;CL:1000746,1.16e-08,7;CL:1000612,1.16e-08,7;CL:0002321,3.83e-08,250;CL:0000047,1.53e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002546;2.28e-18;18!CL:0000031;6.28e-10;6 | |||
|ontology_enrichment_disease=DOID:3095!6.69e-07!22;DOID:2994!6.69e-07!22 | |||
|ontology_enrichment_disease_v019=DOID:3095;5.68e-09;22!DOID:2994;5.68e-09;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,8.78e-09,22;DOID:2994,8.78e-09,22 | |||
|ontology_enrichment_uberon=UBERON:0001986!1.08e-10!18;UBERON:0004638!1.08e-10!18;UBERON:0004852!1.08e-10!18;UBERON:0000487!1.91e-09!22;UBERON:0000119!8.08e-09!312;UBERON:0000483!1.50e-08!309;UBERON:0006914!1.86e-07!25 | |ontology_enrichment_uberon=UBERON:0001986!1.08e-10!18;UBERON:0004638!1.08e-10!18;UBERON:0004852!1.08e-10!18;UBERON:0000487!1.91e-09!22;UBERON:0000119!8.08e-09!312;UBERON:0000483!1.50e-08!309;UBERON:0006914!1.86e-07!25 | ||
|ontology_enrichment_uberon_v019=UBERON:0004638;2.28e-18;18!UBERON:0001986;2.28e-18;18!UBERON:0004852;2.28e-18;18!UBERON:0000487;1.18e-14;22!UBERON:0000490;4.45e-13;33!UBERON:0006914;1.19e-12;25!UBERON:0003915;1.30e-09;9!UBERON:0004700;1.30e-09;9!UBERON:0001917;1.30e-09;9!UBERON:0000074;1.35e-08;7!UBERON:0001229;1.35e-08;7!UBERON:0000013;9.00e-07;5!UBERON:0002410;9.00e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,8.91e-19,18;UBERON:0001986,8.91e-19,18;UBERON:0004852,8.91e-19,18;UBERON:0000487,5.57e-15,22;UBERON:0006914,6.21e-13,25;UBERON:0003915,6.75e-10,9;UBERON:0004700,6.75e-10,9;UBERON:0001917,6.75e-10,9;UBERON:0010532,1.16e-08,7;UBERON:0000074,1.16e-08,7;UBERON:0001229,1.16e-08,7;UBERON:0001230,1.16e-08,7;UBERON:0003220,1.16e-08,7;UBERON:0005749,1.16e-08,7;UBERON:0004199,1.16e-08,7;UBERON:0004209,1.16e-08,7;UBERON:0004198,1.16e-08,7;UBERON:0005103,1.41e-07,8;UBERON:0000083,1.41e-07,8;UBERON:0009201,1.41e-07,8;UBERON:0006553,1.41e-07,8;UBERON:0003074,1.41e-07,8;UBERON:0003060,1.41e-07,8;UBERON:0000080,9.83e-07,9;UBERON:0002120,9.83e-07,9;UBERON:0004875,9.83e-07,9;UBERON:0005721,9.83e-07,9;UBERON:0005754,9.83e-07,9;UBERON:0007297,9.83e-07,9 | |||
|phase1_expression=0.181678379270557,0,0.281908808191942,0,0,0,0,0,0,0.245733936501509,2.09340350391728,0.218441372130172,0,0,0,0,0,0,0,0.369363174230364,0.816002764977012,0.626909442956176,0,0.136874425072884,1.12988375635323,0.534893840235659,0.328402357799783,0.472264687882075,0,0,0,0.919421224478927,1.50602959389125,0,0.0774672005803016,0.142169232487422,0.587200878669695,0,0,0,0,0.32389366601898,0,0,0,0.242584061187816,0.232429036905685,0,0.309706370895104,0,0.256160706529101,0,0,0,0,0.188242339542605,0,0.224723484445085,0.306083892370903,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378139268656271,0,0.175669571386252,0.0654895377488563,0,0,0,0.174129737299267,0,0,0.571994910780128,0,1.19257444420023,1.72046919021225,2.08284300964557,0.56530794192401,1.67799774483962,0.550236083880135,1.46296476575767,1.03366703667732,0.35576626268671,0,0.402829317109147,1.52054421143703,2.19655851793353,0,0,0.625098097988558,0.898117490504679,0.675668882899933,13.7984973719295,4.74632829784064,2.19842092716489,0,0,0,0,0.12663051166458,0,0,0.354668382198357,1.12135520028461,3.20246987189115,0.24666754841716,0,0,0.326923806226917,0,0,0,0,0,0,0.117434498643765,0.323745888736263,0.561803226808994,0,0.491337269247072,0.103325781175765,0,0,0,0,0.336672227908132,0.750711119231785,0.554128230968366,0.438977620880838,0,0,0,0,0,0,0,0,0,0,0.337552664482532,0.194874010322397,0,0,0.161646056818812,0,0.10075209822764,0,0.193260853163297,0,0,0.121973706129595,0.397589304964456,1.04574548582567,0.518305275076852,0.252320850875628,0.36497735907583,0,0,0,0,0,0.118306800039844,0.337169380156203,0,0.110293972732394,0,0.237270619111097,0.134831308160164,0.196221465125346,0.769494313892781,0.738155454624648,0,0,0,0,0,0.590789906681404,0.441463099414651,0.245976877086227,0.171567810298526,0.548751427043128,0,0,0,0.651616610620649,0,1.44331342025273,0.231860809950154,0.117408694235822,0.721832238805369,0,0.190254152234598,0,0,0,0,0,0,0,0.141775097242386,0,0,1.15014803749563,0,0,0.207328115540772,0,0,0.063497894292169,0,1.17217447210047,1.71072446022705,0.205654985406647,0,0,0.897048674762886,0,0.1466765716419,0,0,0,0.26593811658487,0,0.257207374262142,0,0.532844358032199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,1.54657762555539,2.17771144934653,3.18969375826582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0.195801157462741,0.343143423810856,0,0,0,0,1.66435439510497,0.604780586659361,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0.200506470303285,0,0.114814448164607,0,0.393373244878272,0.902399225814824,0.0770153371044148,0.784349769176855,0,0.211103257785751,1.13733384070897,1.87103075804167,0,10.7959076883203,0.270946437543853,0.501689773854853,0,0,0.447749509444357,0,0,0,0.328014645699706,0.325378394664303,0.103041011647722,0.640986253728404,0.82509499920588,0,0,0,0.096670718292122,1.07834031980251,0.307007349452259,0.551346289938122,0.107420244868274,0.290033387828457,0.340906509664404,0.356128142586949,0,0.192190067365106,0.127612712494584,0,0,0,0,0,0,0.869932992075073,0.18532421910392,0,0.372158369359667,0.316379424718726,0,0.511795582622668,0,0,1.56989728039846,0.179872457583315,0.54907405947211,0.471249609382746,0.606547444719948,0,0.421258456238981,1.46290121726877,0.243713489631284,0,0,0.141405431953713,0,0,0,0,0.578775534266688,0,0.202910376962704,0,0.281695602532241,0,0,0,0,0,0,0.75894634753143,0.349934720244983,0.0962221127255121,0,1.08890984861323,0,0.43050537267123,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0.245040215981032,0.185803175125719,0,0.0711418433484141,0.159426272728822,0.59873811429845,0.5745161103971,2.32840940996271,0,0.280797178113459,0.684704037099577,0,0,0,0.321176150207399,0,0,0.343505344755765,0.307240764308458,0.447352215784832,0,0.976940477010201,0,0,0,0.99921590399346,0,0,0,0.606802608747567,0.66866030566487,0,0,0,0,0,0.140669416410513,0,0,0.211125408127993,0.398495976502139,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,3.99227596002388,0,0,0,0,0.254253650292766,0,4.48166385213904,0.874813840149763,0.347249989866585,0,0,0,0,0,0.438770794307945,0,0,0,0,1.1528195219403,0.448788222048861,0.108647371922008,0.31900115973192,0.274792780205587,0,0,0.627921025580099,0,0.676786981851542,0.392125068635479,0.335643173951685,0.189753732724185,0.317873157960757,0,0,0,0,0,0,0,0,0,0.104421949505455,0.134802265961354,0,0.468528891450678,0,0.19566461893209,0,0,1.20990716048664,5.20323694771833,0,0,0,0,0,0,0,0.284609546029793,0.277349346026277,0,0,0.174118413160805,0,0,0.870806981601766,0.0730893170861856,0.903270027585302,0,0,0,0,0,0.126621591911757,0.195551382734803,0,0,0,0,0,0,0.288109595976299,0,0,0.543616824294456,0.104602846312333,0.203996435272644,0,0.600420288709789,0.273810757783986,1.27746588066972,0,0.262887354279314,0,0,0,0,0,0,0,0,1.16495949527454,0.0787831823072236,0.164831716762333,0,0.196854963029498,0,0.795229689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| ||
|short_description=p@chr7:5609944..5609958,+ | |short_description=p@chr7:5609944..5609958,+ | ||
}} | }} |
Latest revision as of 10:55, 31 July 2015
Short description: | p@chr7:5609944..5609958, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:5609944..5609958, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 2.05e-19 | 36 |
blood vessel endothelial cell | 8.91e-19 | 18 |
embryonic blood vessel endothelial progenitor cell | 8.91e-19 | 18 |
endothelial cell of vascular tree | 3.00e-16 | 24 |
meso-epithelial cell | 8.35e-15 | 45 |
lining cell | 2.66e-12 | 58 |
barrier cell | 2.66e-12 | 58 |
glomerular endothelial cell | 4.05e-12 | 5 |
neuron | 4.72e-10 | 6 |
neuroblast | 4.72e-10 | 6 |
electrically signaling cell | 4.72e-10 | 6 |
endothelial cell of artery | 6.75e-10 | 9 |
glomerular cell | 1.16e-08 | 7 |
kidney corpuscule cell | 1.16e-08 | 7 |
embryonic cell | 3.83e-08 | 250 |
neuronal stem cell | 1.53e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 8.91e-19 | 18 |
endothelium | 8.91e-19 | 18 |
cardiovascular system endothelium | 8.91e-19 | 18 |
simple squamous epithelium | 5.57e-15 | 22 |
squamous epithelium | 6.21e-13 | 25 |
endothelial tube | 6.75e-10 | 9 |
arterial system endothelium | 6.75e-10 | 9 |
endothelium of artery | 6.75e-10 | 9 |
primitive nephron | 1.16e-08 | 7 |
renal glomerulus | 1.16e-08 | 7 |
renal corpuscle | 1.16e-08 | 7 |
glomerular capsule | 1.16e-08 | 7 |
metanephric mesenchyme | 1.16e-08 | 7 |
glomerular tuft | 1.16e-08 | 7 |
S-shaped body | 1.16e-08 | 7 |
renal vesicle | 1.16e-08 | 7 |
comma-shaped body | 1.16e-08 | 7 |
mesonephric epithelium | 1.41e-07 | 8 |
mesonephric tubule | 1.41e-07 | 8 |
nephric duct | 1.41e-07 | 8 |
renal duct | 1.41e-07 | 8 |
mesonephric duct | 1.41e-07 | 8 |
pronephric duct | 1.41e-07 | 8 |
mesonephros | 9.83e-07 | 9 |
pronephros | 9.83e-07 | 9 |
nephrogenic cord | 9.83e-07 | 9 |
pronephric mesoderm | 9.83e-07 | 9 |
rostral part of nephrogenic cord | 9.83e-07 | 9 |
presumptive pronephric mesoderm | 9.83e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 8.78e-09 | 22 |
germ cell cancer | 8.78e-09 | 22 |