FFCP PHASE1:Hg19::chr15:83953397..83953425,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr15:83953397..83953425,-
|short_description=p1@BNC1
|description=CAGE_peak_1_at_BNC1_5end
|association_with_transcript=40bp_to_ENST00000345382_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=646 | |EntrezGene=646 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1081 | |HGNC=1081 | ||
|TSSclassifier=strong | |||
|UniProt=Q01954 | |UniProt=Q01954 | ||
|association_with_transcript=40bp_to_ENST00000345382_5end | |||
|cluster_id=chr15:83953397..83953425,- | |||
|coexpression_cluster_id=C2351 | |||
|description=CAGE_peak_1_at_BNC1_5end | |||
|id=chr15:83953397..83953425,- | |||
|ontology_enrichment_celltype=CL:0000220!3.23e-28!246;CL:0002321!2.04e-27!248;CL:0000222!7.07e-25!119;CL:0000076!2.60e-21!62;CL:0000055!5.65e-19!180;CL:0000144!1.33e-12!625;CL:0000183!1.93e-12!59;CL:0000680!2.30e-12!57;CL:0000056!2.30e-12!57;CL:0000355!2.30e-12!57;CL:0000213!4.58e-12!57;CL:0000215!4.58e-12!57;CL:0000066!6.89e-12!254;CL:0000187!1.10e-11!54;CL:0000548!7.22e-11!679;CL:0000004!7.22e-11!679;CL:0000255!7.22e-11!679;CL:0000057!7.83e-11!75;CL:0000012!2.52e-10!682;CL:0000393!3.85e-10!60;CL:0000211!3.85e-10!60;CL:0002371!4.70e-10!591;CL:0000192!7.49e-10!42;CL:0000514!7.49e-10!42;CL:0000077!1.02e-08!19;CL:0000359!1.08e-08!32;CL:0002078!1.28e-07!44;CL:0002076!3.09e-07!43;CL:0002368!8.36e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0000076;6.99e-11;63!CL:0000077;1.05e-09;19!CL:0000359;2.57e-08;32!CL:0002368;1.23e-07;13!CL:0000192;2.70e-07;43!CL:0002076;3.10e-07;42!CL:0000213;4.93e-07;58!CL:0000215;4.93e-07;58!CL:0002159;6.76e-07;14!CL:0000187;7.16e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,5.40e-28,250;CL:0000222,5.01e-24,121;CL:0000076,7.35e-23,63;CL:0000066,5.42e-13,253;CL:0000680,3.82e-12,58;CL:0000056,3.82e-12,58;CL:0000355,3.82e-12,58;CL:0000213,9.76e-12,58;CL:0000215,9.76e-12,58;CL:0000187,2.09e-11,55;CL:0000057,4.58e-10,76;CL:0000077,9.90e-10,19;CL:0000393,1.03e-09,61;CL:0000211,1.03e-09,61;CL:0000192,2.37e-09,43;CL:0000514,2.37e-09,43;CL:0002076,7.24e-09,42;CL:0000359,1.19e-08,32;CL:0002368,1.26e-07,13;CL:0002159,6.51e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000514;2.70e-07;43!CL:0000222;3.12e-07;121!CL:0000355;8.33e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000486!1.67e-18!82;UBERON:0000914!1.93e-18!83;UBERON:0002329!1.93e-18!83;UBERON:0003077!1.93e-18!83;UBERON:0003059!1.93e-18!83;UBERON:0007282!1.93e-18!83;UBERON:0009618!1.93e-18!83;UBERON:0007285!1.93e-18!83;UBERON:0005256!2.88e-16!143;UBERON:0003102!5.99e-16!95;UBERON:0004290!3.19e-15!70;UBERON:0000483!5.00e-15!309;UBERON:0000119!7.43e-15!312;UBERON:0000475!8.07e-13!365;UBERON:0002049!1.71e-12!79;UBERON:0007798!1.71e-12!79;UBERON:0001134!4.69e-12!61;UBERON:0002036!4.69e-12!61;UBERON:0003082!4.69e-12!61;UBERON:0000481!5.05e-12!347;UBERON:0000490!6.15e-12!138;UBERON:0002385!8.88e-12!63;UBERON:0001015!8.88e-12!63;UBERON:0000383!8.88e-12!63;UBERON:0000055!1.52e-11!69;UBERON:0001981!3.12e-11!60;UBERON:0007500!3.12e-11!60;UBERON:0004537!3.12e-11!60;UBERON:0006965!3.12e-11!60;UBERON:0003914!5.21e-11!118;UBERON:0003104!5.22e-11!238;UBERON:0009142!5.22e-11!238;UBERON:0002100!5.59e-11!216;UBERON:0004872!1.06e-10!84;UBERON:0001444!1.25e-10!48;UBERON:0001637!1.85e-09!42;UBERON:0003509!1.85e-09!42;UBERON:0004572!1.85e-09!42;UBERON:0002097!2.76e-09!40;UBERON:0002199!6.40e-09!45;UBERON:0002416!6.40e-09!45;UBERON:0004535!1.57e-08!110;UBERON:0005085!3.35e-08!29;UBERON:0001009!6.01e-08!113;UBERON:0000468!6.24e-08!659;UBERON:0004573!9.29e-08!33;UBERON:0004571!9.29e-08!33;UBERON:0000165!1.11e-07!28;UBERON:0000930!1.11e-07!28 | |||
|ontology_enrichment_uberon_v019=UBERON:0000165;9.85e-09;28!UBERON:0003102;6.39e-08;50!UBERON:0002097;7.23e-08;41!UBERON:0001637;8.27e-08;42!UBERON:0003509;8.27e-08;42!UBERON:0004572;8.27e-08;42!UBERON:0004573;1.18e-07;33!UBERON:0004571;1.18e-07;33!UBERON:0003914;1.60e-07;74!UBERON:0007500;4.22e-07;56!UBERON:0001981;4.22e-07;56!UBERON:0004537;4.22e-07;56!UBERON:0003729;6.96e-07;13 | |||
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| ||
|short_description=p1@BNC1 | |||
}} | }} |
Latest revision as of 12:15, 19 September 2015
Short description: | p1@BNC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_BNC1_5end |
Coexpression cluster: | C2351_Small_Keratinocyte_Bronchial_Sebocyte_mesothelioma_salivary_Tracheal |
Association with transcript: | 40bp_to_ENST00000345382_5end |
EntrezGene: | BNC1 |
HGNC: | 1081 |
UniProt: | Q01954 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 5.40e-28 | 250 |
mesodermal cell | 5.01e-24 | 121 |
squamous epithelial cell | 7.35e-23 | 63 |
epithelial cell | 5.42e-13 | 253 |
muscle precursor cell | 3.82e-12 | 58 |
myoblast | 3.82e-12 | 58 |
multi-potent skeletal muscle stem cell | 3.82e-12 | 58 |
lining cell | 9.76e-12 | 58 |
barrier cell | 9.76e-12 | 58 |
muscle cell | 2.09e-11 | 55 |
fibroblast | 4.58e-10 | 76 |
mesothelial cell | 9.90e-10 | 19 |
electrically responsive cell | 1.03e-09 | 61 |
electrically active cell | 1.03e-09 | 61 |
smooth muscle cell | 2.37e-09 | 43 |
smooth muscle myoblast | 2.37e-09 | 43 |
endo-epithelial cell | 7.24e-09 | 42 |
vascular associated smooth muscle cell | 1.19e-08 | 32 |
respiratory epithelial cell | 1.26e-07 | 13 |
general ecto-epithelial cell | 6.51e-07 | 14 |