FFCP PHASE1:Hg19::chr9:140149730..140149826,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=25920 | |EntrezGene=25920 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24324 | |HGNC=24324 | ||
|TSSclassifier=strong | |||
|UniProt=Q8WX92 | |UniProt=Q8WX92 | ||
|association_with_transcript=0bp_to_NM_015456,uc004cmm.3_5end | |association_with_transcript=0bp_to_NM_015456,uc004cmm.3_5end | ||
|cluster_id=chr9:140149730..140149826,+ | |||
|description=CAGE_peak_1_at_COBRA1_5end | |description=CAGE_peak_1_at_COBRA1_5end | ||
|id=chr9:140149730..140149826,+ | |id=chr9:140149730..140149826,+ | ||
|ontology_enrichment_celltype=CL:0002321!6.02e-18!248;CL:0000220!2.02e-17!246;CL:0000066!9.32e-12!254;CL:0000222!3.50e-11!119;CL:0000055!9.93e-09!180;CL:0000183!1.25e-08!59;CL:0002078!5.32e-08!44;CL:0000393!5.74e-08!60;CL:0000211!5.74e-08!60;CL:0000115!8.68e-08!35;CL:1000449!2.85e-07!16;CL:0000071!4.43e-07!18;CL:0002546!4.43e-07!18;CL:0000187!8.12e-07!54 | |ontology_enrichment_celltype=CL:0002321!6.02e-18!248;CL:0000220!2.02e-17!246;CL:0000066!9.32e-12!254;CL:0000222!3.50e-11!119;CL:0000055!9.93e-09!180;CL:0000183!1.25e-08!59;CL:0002078!5.32e-08!44;CL:0000393!5.74e-08!60;CL:0000211!5.74e-08!60;CL:0000115!8.68e-08!35;CL:1000449!2.85e-07!16;CL:0000071!4.43e-07!18;CL:0002546!4.43e-07!18;CL:0000187!8.12e-07!54 | ||
|ontology_enrichment_celltype_v019=CL:1000449;8.70e-08;15!CL:0000115;4.11e-07;36!CL:0000071;4.87e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,3.38e-18,250;CL:0000066,7.43e-12,253;CL:0000222,2.21e-11,121;CL:0002078,2.01e-08,45;CL:0000115,3.12e-08,36;CL:1000449,7.62e-08,15;CL:0000393,9.11e-08,61;CL:0000211,9.11e-08,61;CL:0000071,4.43e-07,18;CL:0002546,4.43e-07,18 | |||
|ontology_enrichment_development_v019=CL:0002546;4.87e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000483!7.24e-11!309;UBERON:0000119!8.07e-11!312;UBERON:0003914!2.32e-10!118;UBERON:0000481!4.50e-10!347;UBERON:0000490!6.23e-09!138;UBERON:0004872!1.17e-08!84;UBERON:0002100!3.43e-08!216;UBERON:0000486!3.94e-08!82;UBERON:0004290!4.06e-08!70;UBERON:0000025!4.49e-08!194;UBERON:0000475!4.87e-08!365;UBERON:0001981!5.08e-08!60;UBERON:0007500!5.08e-08!60;UBERON:0004537!5.08e-08!60;UBERON:0006965!5.08e-08!60;UBERON:0005256!7.27e-08!143;UBERON:0003104!8.98e-08!238;UBERON:0009142!8.98e-08!238;UBERON:0001637!1.60e-07!42;UBERON:0003509!1.60e-07!42;UBERON:0004572!1.60e-07!42;UBERON:0000487!1.82e-07!22;UBERON:0000914!1.87e-07!83;UBERON:0002329!1.87e-07!83;UBERON:0003077!1.87e-07!83;UBERON:0003059!1.87e-07!83;UBERON:0007282!1.87e-07!83;UBERON:0009618!1.87e-07!83;UBERON:0007285!1.87e-07!83;UBERON:0004211!2.85e-07!16;UBERON:0001285!2.85e-07!16;UBERON:0007684!2.85e-07!16;UBERON:0003220!2.85e-07!16;UBERON:0004208!2.85e-07!16;UBERON:0000055!4.03e-07!69;UBERON:0000064!4.30e-07!219;UBERON:0001986!4.43e-07!18;UBERON:0004638!4.43e-07!18;UBERON:0004852!4.43e-07!18;UBERON:0002049!6.34e-07!79;UBERON:0007798!6.34e-07!79 | |ontology_enrichment_uberon=UBERON:0000483!7.24e-11!309;UBERON:0000119!8.07e-11!312;UBERON:0003914!2.32e-10!118;UBERON:0000481!4.50e-10!347;UBERON:0000490!6.23e-09!138;UBERON:0004872!1.17e-08!84;UBERON:0002100!3.43e-08!216;UBERON:0000486!3.94e-08!82;UBERON:0004290!4.06e-08!70;UBERON:0000025!4.49e-08!194;UBERON:0000475!4.87e-08!365;UBERON:0001981!5.08e-08!60;UBERON:0007500!5.08e-08!60;UBERON:0004537!5.08e-08!60;UBERON:0006965!5.08e-08!60;UBERON:0005256!7.27e-08!143;UBERON:0003104!8.98e-08!238;UBERON:0009142!8.98e-08!238;UBERON:0001637!1.60e-07!42;UBERON:0003509!1.60e-07!42;UBERON:0004572!1.60e-07!42;UBERON:0000487!1.82e-07!22;UBERON:0000914!1.87e-07!83;UBERON:0002329!1.87e-07!83;UBERON:0003077!1.87e-07!83;UBERON:0003059!1.87e-07!83;UBERON:0007282!1.87e-07!83;UBERON:0009618!1.87e-07!83;UBERON:0007285!1.87e-07!83;UBERON:0004211!2.85e-07!16;UBERON:0001285!2.85e-07!16;UBERON:0007684!2.85e-07!16;UBERON:0003220!2.85e-07!16;UBERON:0004208!2.85e-07!16;UBERON:0000055!4.03e-07!69;UBERON:0000064!4.30e-07!219;UBERON:0001986!4.43e-07!18;UBERON:0004638!4.43e-07!18;UBERON:0004852!4.43e-07!18;UBERON:0002049!6.34e-07!79;UBERON:0007798!6.34e-07!79 | ||
|ontology_enrichment_uberon_v019=UBERON:0006555;8.70e-08;15!UBERON:0004819;8.70e-08;15!UBERON:0001285;8.70e-08;15!UBERON:0007684;8.70e-08;15!UBERON:0003914;9.30e-08;74!UBERON:0000490;1.46e-07;33!UBERON:0000353;1.53e-07;15!UBERON:0000487;1.76e-07;22!UBERON:0004638;4.87e-07;18!UBERON:0001986;4.87e-07;18!UBERON:0004852;4.87e-07;18 | |||
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| ||
|short_description=p1@COBRA1 | |short_description=p1@COBRA1 | ||
}} | }} |
Latest revision as of 16:57, 16 September 2015
Short description: | p1@COBRA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_COBRA1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_015456, uc004cmm.3_5end |
EntrezGene: | COBRA1 |
HGNC: | 24324 |
UniProt: | Q8WX92 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 3.38e-18 | 250 |
epithelial cell | 7.43e-12 | 253 |
mesodermal cell | 2.21e-11 | 121 |
meso-epithelial cell | 2.01e-08 | 45 |
endothelial cell | 3.12e-08 | 36 |
epithelial cell of nephron | 7.62e-08 | 15 |
electrically responsive cell | 9.11e-08 | 61 |
electrically active cell | 9.11e-08 | 61 |
blood vessel endothelial cell | 4.43e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.43e-07 | 18 |