FFCP PHASE1:Hg19::chr16:1832923..1833008,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr16:1832923..1833008,+
|short_description=p1@NUBP2
|description=CAGE_peak_1_at_NUBP2_5end
|association_with_transcript=0bp_to_ENST00000543305,NM_012225,uc002c...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10101 | |EntrezGene=10101 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8042 | |HGNC=8042 | ||
|TSSclassifier=strong | |||
|UniProt=B7Z6P0,Q9Y5Y2 | |UniProt=B7Z6P0,Q9Y5Y2 | ||
|association_with_transcript=0bp_to_ENST00000543305,NM_012225,uc002cmw.3,uc002cmx.3_5end | |||
|cluster_id=chr16:1832923..1833008,+ | |||
|coexpression_cluster_id=C534 | |||
|description=CAGE_peak_1_at_NUBP2_5end | |||
|id=chr16:1832923..1833008,+ | |||
|ontology_enrichment_celltype=CL:0002321!1.63e-18!248;CL:0000220!2.27e-18!246;CL:0000222!2.80e-13!119;CL:0000066!1.81e-11!254;CL:0000012!1.05e-09!682;CL:0000548!1.84e-09!679;CL:0000004!1.84e-09!679;CL:0000255!1.84e-09!679;CL:0000183!2.24e-09!59;CL:0000393!5.57e-09!60;CL:0000211!5.57e-09!60;CL:0000003!7.67e-08!722;CL:0000055!1.96e-07!180;CL:0000187!2.16e-07!54;CL:0000359!2.48e-07!32;CL:0000192!2.57e-07!42;CL:0000514!2.57e-07!42;CL:0000071!4.12e-07!18;CL:0002546!4.12e-07!18;CL:0000115!6.78e-07!35;CL:0000213!8.05e-07!57;CL:0000215!8.05e-07!57;CL:0000144!8.70e-07!625 | |||
|ontology_enrichment_celltype_v019=CL:0000071;4.02e-07;18!CL:0000359;6.41e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,6.16e-19,250;CL:0000222,1.14e-13,121;CL:0000066,2.07e-11,253;CL:0000393,5.40e-09,61;CL:0000211,5.40e-09,61;CL:0000187,2.07e-07,55;CL:0000359,2.48e-07,32;CL:0000192,2.54e-07,43;CL:0000514,2.54e-07,43;CL:0000115,2.83e-07,36;CL:0000213,3.78e-07,58;CL:0000215,3.78e-07,58;CL:0000071,4.12e-07,18;CL:0002546,4.12e-07,18;CL:0002078,6.72e-07,45;CL:0000221,9.63e-07,72 | |||
|ontology_enrichment_development_v019=CL:0002546;4.02e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001637!1.20e-10!42;UBERON:0003509!1.20e-10!42;UBERON:0004572!1.20e-10!42;UBERON:0002049!1.45e-10!79;UBERON:0007798!1.45e-10!79;UBERON:0001981!2.33e-10!60;UBERON:0007500!2.33e-10!60;UBERON:0004537!2.33e-10!60;UBERON:0006965!2.33e-10!60;UBERON:0000055!3.87e-10!69;UBERON:0003914!7.51e-10!118;UBERON:0004872!3.21e-09!84;UBERON:0004290!3.70e-09!70;UBERON:0000914!5.88e-09!83;UBERON:0002329!5.88e-09!83;UBERON:0003077!5.88e-09!83;UBERON:0003059!5.88e-09!83;UBERON:0007282!5.88e-09!83;UBERON:0009618!5.88e-09!83;UBERON:0007285!5.88e-09!83;UBERON:0000486!5.99e-09!82;UBERON:0003104!1.50e-08!238;UBERON:0009142!1.50e-08!238;UBERON:0000490!1.57e-08!138;UBERON:0005256!1.12e-07!143;UBERON:0004573!1.89e-07!33;UBERON:0004571!1.89e-07!33;UBERON:0001986!4.12e-07!18;UBERON:0004638!4.12e-07!18;UBERON:0004852!4.12e-07!18;UBERON:0001134!5.99e-07!61;UBERON:0002036!5.99e-07!61;UBERON:0003082!5.99e-07!61;UBERON:0002100!9.08e-07!216;UBERON:0000487!9.84e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;5.72e-08;42!UBERON:0003509;5.72e-08;42!UBERON:0004572;5.72e-08;42!UBERON:0003914;1.12e-07;74!UBERON:0007500;1.88e-07;56!UBERON:0001981;1.88e-07;56!UBERON:0004537;1.88e-07;56!UBERON:0004638;4.02e-07;18!UBERON:0001986;4.02e-07;18!UBERON:0004852;4.02e-07;18!UBERON:0004573;8.33e-07;33!UBERON:0004571;8.33e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,6.13e-12,78;UBERON:0002049,4.17e-11,78;UBERON:0007798,4.17e-11,78;UBERON:0007500,5.47e-11,59;UBERON:0001981,5.47e-11,59;UBERON:0004537,5.47e-11,59;UBERON:0006965,5.47e-11,59;UBERON:0000055,1.05e-10,68;UBERON:0001637,1.20e-10,42;UBERON:0003509,1.20e-10,42;UBERON:0004572,1.20e-10,42;UBERON:0000490,1.52e-10,148;UBERON:0003914,8.23e-10,117;UBERON:0004872,1.08e-09,83;UBERON:0002329,3.52e-09,71;UBERON:0003059,3.52e-09,71;UBERON:0007282,3.52e-09,71;UBERON:0004290,3.52e-09,71;UBERON:0009618,3.52e-09,71;UBERON:0007524,3.83e-09,73;UBERON:0003077,4.38e-09,72;UBERON:0007285,4.38e-09,72;UBERON:0000486,5.59e-09,83;UBERON:0003104,7.06e-08,160;UBERON:0009142,7.06e-08,160;UBERON:0004573,1.89e-07,33;UBERON:0004571,1.89e-07,33;UBERON:0004638,4.12e-07,18;UBERON:0001986,4.12e-07,18;UBERON:0004852,4.12e-07,18;UBERON:0001134,5.63e-07,62;UBERON:0002036,5.63e-07,62;UBERON:0003082,5.63e-07,62;UBERON:0002100,7.47e-07,199;UBERON:0000487,9.84e-07,22 | |||
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|short_description=p1@NUBP2 | |||
}} | }} |
Latest revision as of 23:06, 24 September 2015
Short description: | p1@NUBP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NUBP2_5end |
Coexpression cluster: | C534_Mesenchymal_Alveolar_Renal_Placental_Fibroblast_Smooth_Tracheal |
Association with transcript: | 0bp_to_ENST00000543305, NM_012225, uc002cmw.3, uc002cmx.3_5end |
EntrezGene: | NUBP2 |
HGNC: | 8042 |
UniProt: | B7Z6P0Q9Y5Y2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 6.16e-19 | 250 |
mesodermal cell | 1.14e-13 | 121 |
epithelial cell | 2.07e-11 | 253 |
electrically responsive cell | 5.40e-09 | 61 |
electrically active cell | 5.40e-09 | 61 |
muscle cell | 2.07e-07 | 55 |
vascular associated smooth muscle cell | 2.48e-07 | 32 |
smooth muscle cell | 2.54e-07 | 43 |
smooth muscle myoblast | 2.54e-07 | 43 |
endothelial cell | 2.83e-07 | 36 |
lining cell | 3.78e-07 | 58 |
barrier cell | 3.78e-07 | 58 |
blood vessel endothelial cell | 4.12e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.12e-07 | 18 |
meso-epithelial cell | 6.72e-07 | 45 |
ectodermal cell | 9.63e-07 | 72 |