FFCP PHASE1:Hg19::chr16:2805077..2805090,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr16:2805077..2805090,+
|short_description=p@chr16:2805077..2805090,+
|description=CAGE_peak_at_chr16:2805077..2805090,+
|association_with_transcript=NA
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr16:2805077..2805090,+ | |||
|coexpression_cluster_id=C119 | |||
|description=CAGE_peak_at_chr16:2805077..2805090,+ | |||
|id=chr16:2805077..2805090,+ | |||
|ontology_enrichment_celltype=CL:0000738!2.36e-25!140;CL:0000037!2.16e-24!172;CL:0000566!2.16e-24!172;CL:0002032!1.26e-22!165;CL:0000837!1.26e-22!165;CL:0000988!4.61e-22!182;CL:0002031!5.34e-21!124;CL:0002087!9.40e-21!119;CL:0002057!1.21e-12!42;CL:0000763!1.58e-12!112;CL:0000049!1.58e-12!112;CL:0000860!6.02e-12!45;CL:0000766!1.71e-11!76;CL:0000838!1.26e-10!52;CL:0000557!2.29e-10!71;CL:0000542!3.04e-10!53;CL:0000051!3.04e-10!53;CL:0002009!3.17e-10!65;CL:0000839!9.25e-10!70;CL:0002194!3.94e-09!63;CL:0000576!3.94e-09!63;CL:0000040!3.94e-09!63;CL:0000559!3.94e-09!63;CL:0000624!6.00e-08!6;CL:0002393!5.25e-07!9;CL:0002397!5.25e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000791;9.74e-19;18!CL:0000789;9.74e-19;18!CL:0002419;9.74e-19;18!CL:0000084;5.45e-18;25!CL:0000542;2.43e-15;53!CL:0000624;6.41e-15;6!CL:0000623;5.37e-14;3!CL:0000625;1.93e-08;11!CL:0002087;1.63e-07;104!CL:0002393;1.96e-07;6!CL:0002397;1.96e-07;6!CL:0000236;3.85e-07;13!CL:0000738;7.63e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,1.52e-24,52;CL:0000542,4.76e-24,53;CL:0000051,4.76e-24,53;CL:0000738,2.52e-22,136;CL:0002031,3.97e-20,120;CL:0000791,8.21e-19,18;CL:0000789,8.21e-19,18;CL:0002420,8.21e-19,18;CL:0002419,8.21e-19,18;CL:0000790,8.21e-19,18;CL:0002087,1.63e-18,115;CL:0002032,1.88e-18,161;CL:0000837,1.88e-18,161;CL:0000084,5.46e-18,25;CL:0000827,5.46e-18,25;CL:0000037,1.43e-17,168;CL:0000988,1.54e-16,177;CL:0000624,5.83e-15,6;CL:0000623,6.12e-14,3;CL:0000825,6.12e-14,3;CL:0000625,1.76e-08,11;CL:0000134,8.27e-07,354 | |||
|ontology_enrichment_development_v019=CL:0000790;9.74e-19;18!CL:0000051;2.43e-15;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.38e-09!102;UBERON:0003061!5.38e-09!102;UBERON:0002371!1.28e-08!80;UBERON:0001474!2.18e-08!86;UBERON:0002193!4.47e-07!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0001389;1.05e-10;1!UBERON:0000026;1.05e-10;1!UBERON:0008784;1.05e-10;1!UBERON:0006058;1.05e-10;1!UBERON:0003663;1.05e-10;1!UBERON:0004256;1.05e-10;1!UBERON:0004708;1.05e-10;1!UBERON:0002101;1.05e-10;1!UBERON:0004709;1.05e-10;1!UBERON:0002529;1.05e-10;1!UBERON:0010538;1.05e-10;1!UBERON:0003661;1.05e-10;1!UBERON:0010890;1.05e-10;1!UBERON:0002471;1.05e-10;1!UBERON:0001383;1.05e-10;1!UBERON:0010758;1.05e-10;1!UBERON:0010707;1.05e-10;1!UBERON:0000978;1.05e-10;1!UBERON:0002103;1.05e-10;1!UBERON:0001665;1.05e-10;1!UBERON:0003823;1.05e-10;1!UBERON:0000154;1.05e-10;1!UBERON:0010709;1.05e-10;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005418,1.21e-10,1;UBERON:0001389,1.21e-10,1;UBERON:0000026,1.21e-10,1;UBERON:0008784,1.21e-10,1;UBERON:0006058,1.21e-10,1;UBERON:0003663,1.21e-10,1;UBERON:0004256,1.21e-10,1;UBERON:0004708,1.21e-10,1;UBERON:0002101,1.21e-10,1;UBERON:0004709,1.21e-10,1;UBERON:0002529,1.21e-10,1;UBERON:0010538,1.21e-10,1;UBERON:0003661,1.21e-10,1;UBERON:0010890,1.21e-10,1;UBERON:0002471,1.21e-10,1;UBERON:0001383,1.21e-10,1;UBERON:0004357,1.21e-10,1;UBERON:0004347,1.21e-10,1;UBERON:0005420,1.21e-10,1;UBERON:0005732,1.21e-10,1;UBERON:0010758,1.21e-10,1;UBERON:0010707,1.21e-10,1;UBERON:0000978,1.21e-10,1;UBERON:0002103,1.21e-10,1;UBERON:0001665,1.21e-10,1;UBERON:0003823,1.21e-10,1;UBERON:0000154,1.21e-10,1;UBERON:0010709,1.21e-10,1;UBERON:0005733,1.21e-10,1;UBERON:0005730,1.21e-10,1 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0.123121058076788,0,0,0,0,0,0.0764134057479513,0,0.0787107813136792,0,0,0.154816123316076,0,0,0,0,0.142169232487422,0,0.553995408531877,3.00816671205213,2.82114131930607,0,0,0.257575567634187,0.290796477559129,0.377875943688809,0,0.232429036905685,0,0,0,0.256160706529101,0,0,0,1.35426486594342,0,0,0,0.612167784741805,0,0,0.329851300186716,0.199463657621632,0.852449501065388,0.580418477257168,1.13477044938228,0.622822248995575,0.502497330513487,0.521482918420201,0.217188844705117,0,0.368277635987565,0.316462387440884,0.211255286311942,0.425208599930087,0,0.22465726229299,0.150176892841506,0.32145117339416,0.570025487482497,0.19891667719909,0.182664153764634,0,0,0,0.426730222566507,0.400395987036012,0,0,0,1.1384259382189,1.76171156811282,3.44045905312706,0,0,0,1.180258620683,5.89516144123747,1.64481199199607,0,0.651844533267181,0.473447805734733,0,0,0.589211814949674,0.443067789167242,0,0,0.130059347559878,0.328875809207352,0,0,0.444859689486181,0,0,0.113309342697566,0.766440987203842,0.68725489096526,0,0,0,0,0,0,0,0,0,1.41124720257313,2.94184215361858,3.04131248153878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367663080345869,0,0,0,0,0,0,0.183201743930407,1.31780417436063,0,0,0,0,0.264818361626438,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358779271377724,0,0,0,0,0.257640540045629,0,0.168776332241266,0,0,0.0920498986422993,0,0,0,0,0,0,0,0.121973706129595,0,0.232387885739037,0.10366105501537,0.252320850875628,0.36497735907583,0,0,0,0,0,0.118306800039844,0,0,0.110293972732394,0.217879444092406,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0.246217006087397,0,0.148631162288728,0,0,0,0.0895585227028483,0,0,0,0.088048434013226,0.207328115540772,0,0.12624243342638,0.063497894292169,0,0,0,0.102827492703324,0,0,0.112131084345361,0,0.07333828582095,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0.591092280605782,3.01878604803324,2.56686072559497,0,0,0,0,0,0.749007023947182,2.99161459204025,0.414415513436035,0,0,0,0,0.178428988797162,0.157702415033935,0,0,0,0,0,0,0,0,0,0.620304078368662,0.862856803274467,0.533637789017222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0.223874754722178,0,0.261435451024901,0,0,0,0,0.0915694648183434,0.330037999682352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6196469961995,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0,0.411362273086194,0,0,0,0,0,0,0,0.144269212976445,0.0711418433484141,0.159426272728822,0.59873811429845,0,0.211673582723883,0,0.280797178113459,0.228234679033192,0.313359791546046,0,0,0.321176150207399,0.201799707191048,0,0,0,0,0,0,0,0,0,0.66614393599564,0,0,0,0.121360521749513,0.111443384277478,0,0,0,0,0,0.140669416410513,0,0.16480387422676,0.211125408127993,0,0,0,0,0.123084805461069,0,0.0898683511473268,0.358042349351218,0,0,0,0,0,0,0,0.260427761085233,0,0,0,0,0.236387681767936,0,0.291604613383254,0.520874984799877,0,0.241192877250816,0,0.331737779793674,0.295547618953547,0,0,0,0,0,0,0.0897576444097721,0.108647371922008,0,0,0,1.02193298195737,0.156980256395025,0,0,0,0,0.189753732724185,0,0.421996129056054,0.163232808159148,0,0,0.995261931078505,0,0,0,0,0.104421949505455,0,0,0,0.182454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347119476670262,0,0,0,0.171986032471617,0,0.0730893170861856,0,0,0,0,0,0.19871461170299,0.0633107959558787,0.195551382734803,0,0,0,0.144090417154106,0.114536596165916,0.514784993585894,0,0,0.235694034616795,0.135904206073614,0.104602846312333,0.101998217636322,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0.13480708770837,0,0,0,0.544813624446302,0.160753148465019,0.137539436597234,0.415440338029185,0.2249738915515,1.5476039091159,0,0.335434687599266,0,0,0,0.179287339332845,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0.1251909307065,0,0.221858103073705,0.0620964029413835,0.415045904808692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0.380805212168795,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0.226705925512272,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0.194860308839388,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436838552768056,0,0,0,0,0,0,0,0,0.6124909547064,0,0,0.478901577171454,0,0,0,0,0,0.294443155503077,0,0,0.115525666150338,0.381382095467167,0,0,0,0.20170506870352,0,0.261906694481422,0,0,0.0675375846183947,0,0.206686796501184,0,0,0,0.496211178389294,1.40696995487696,0.127762427639595,0,0.336283722218824,0,0,0,0,0,0,0.0657727735628491,0,0,0,0.157115589916002,0,0,0,0,0,0.47404083519818,0,0,0,0.207216164163037,0.17071847709395,0,0,0,0.0852134047591577,0.423387050190929,0,0,0,0.111855431797792,0,0,1.29485767437579,0,0,0,0,0.198950775161368,0,0,0.769583617218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| ||
|short_description=p@chr16:2805077..2805090,+ | |||
}} | }} |
Latest revision as of 07:34, 25 July 2015
Short description: | p@chr16:2805077..2805090, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:2805077..2805090, + |
Coexpression cluster: | C119_CD4_CD8_Natural_Neutrophils_CD14_Peripheral_CD19 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 1.52e-24 | 52 |
lymphocyte | 4.76e-24 | 53 |
common lymphoid progenitor | 4.76e-24 | 53 |
leukocyte | 2.52e-22 | 136 |
hematopoietic lineage restricted progenitor cell | 3.97e-20 | 120 |
mature alpha-beta T cell | 8.21e-19 | 18 |
alpha-beta T cell | 8.21e-19 | 18 |
immature T cell | 8.21e-19 | 18 |
mature T cell | 8.21e-19 | 18 |
immature alpha-beta T cell | 8.21e-19 | 18 |
nongranular leukocyte | 1.63e-18 | 115 |
hematopoietic oligopotent progenitor cell | 1.88e-18 | 161 |
hematopoietic multipotent progenitor cell | 1.88e-18 | 161 |
T cell | 5.46e-18 | 25 |
pro-T cell | 5.46e-18 | 25 |
hematopoietic stem cell | 1.43e-17 | 168 |
hematopoietic cell | 1.54e-16 | 177 |
CD4-positive, alpha-beta T cell | 5.83e-15 | 6 |
natural killer cell | 6.12e-14 | 3 |
pro-NK cell | 6.12e-14 | 3 |
CD8-positive, alpha-beta T cell | 1.76e-08 | 11 |
mesenchymal cell | 8.27e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
hindlimb bud | 1.21e-10 | 1 |
soleus muscle | 1.21e-10 | 1 |
appendage | 1.21e-10 | 1 |
lower limb segment | 1.21e-10 | 1 |
multi-limb segment region | 1.21e-10 | 1 |
hindlimb muscle | 1.21e-10 | 1 |
hindlimb zeugopod muscle | 1.21e-10 | 1 |
paired limb/fin | 1.21e-10 | 1 |
limb | 1.21e-10 | 1 |
pelvic appendage | 1.21e-10 | 1 |
limb segment | 1.21e-10 | 1 |
paired limb/fin segment | 1.21e-10 | 1 |
limb muscle | 1.21e-10 | 1 |
pelvic complex muscle | 1.21e-10 | 1 |
zeugopod | 1.21e-10 | 1 |
muscle of leg | 1.21e-10 | 1 |
paired limb/fin bud | 1.21e-10 | 1 |
limb bud | 1.21e-10 | 1 |
pelvic appendage bud | 1.21e-10 | 1 |
limb/fin field | 1.21e-10 | 1 |
subdivision of organism along appendicular axis | 1.21e-10 | 1 |
appendage girdle complex | 1.21e-10 | 1 |
leg | 1.21e-10 | 1 |
hindlimb | 1.21e-10 | 1 |
triceps surae | 1.21e-10 | 1 |
hindlimb zeugopod | 1.21e-10 | 1 |
posterior region of body | 1.21e-10 | 1 |
pelvic complex | 1.21e-10 | 1 |
limb field | 1.21e-10 | 1 |
hindlimb/pelvic fin field | 1.21e-10 | 1 |