FFCP PHASE1:Hg19::chr5:58335535..58335548,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5144 | |EntrezGene=5144 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8783 | |HGNC=8783 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-193bp_to_ENST00000515011,uc003jru.2_5end | |association_with_transcript=-193bp_to_ENST00000515011,uc003jru.2_5end | ||
|cluster_id=chr5:58335535..58335548,- | |||
|coexpression_cluster_id=C22 | |||
|description=CAGE_peak_42_at_PDE4D_5end | |description=CAGE_peak_42_at_PDE4D_5end | ||
|id=chr5:58335535..58335548,- | |id=chr5:58335535..58335548,- | ||
|ontology_enrichment_celltype=CL:0000791!1.18e-16!18;CL:0000789!1.18e-16!18;CL:0002420!1.18e-16!18;CL:0002419!1.18e-16!18;CL:0000790!1.18e-16!18;CL:0000084!4.09e-12!25;CL:0000827!4.09e-12!25;CL:0000624!4.65e-10!6;CL:0000625!6.81e-10!11;CL:0000838!4.15e-07!52;CL:0000542!7.27e-07!53;CL:0000051!7.27e-07!53 | |ontology_enrichment_celltype=CL:0000791!1.18e-16!18;CL:0000789!1.18e-16!18;CL:0002420!1.18e-16!18;CL:0002419!1.18e-16!18;CL:0000790!1.18e-16!18;CL:0000084!4.09e-12!25;CL:0000827!4.09e-12!25;CL:0000624!4.65e-10!6;CL:0000625!6.81e-10!11;CL:0000838!4.15e-07!52;CL:0000542!7.27e-07!53;CL:0000051!7.27e-07!53 | ||
|ontology_enrichment_celltype_v019=CL:0000791;3.78e-26;18!CL:0000789;3.78e-26;18!CL:0002419;3.78e-26;18!CL:0000624;4.87e-26;6!CL:0000623;1.02e-18;3!CL:0000226;1.56e-18;3!CL:0000842;1.56e-18;3!CL:0000084;2.10e-18;25!CL:0000784;8.16e-18;3!CL:0000898;3.33e-09;3!CL:0000625;6.56e-09;11!CL:0000542;1.14e-08;53!CL:0000895;1.27e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,3.57e-26,18;CL:0000789,3.57e-26,18;CL:0002420,3.57e-26,18;CL:0002419,3.57e-26,18;CL:0000790,3.57e-26,18;CL:0000624,4.20e-26,6;CL:0000623,7.60e-19,3;CL:0000825,7.60e-19,3;CL:0000226,1.56e-18,3;CL:0000842,1.56e-18,3;CL:0000084,2.02e-18,25;CL:0000827,2.02e-18,25;CL:0000784,4.29e-18,3;CL:0000738,1.47e-16,136;CL:0000838,1.45e-14,52;CL:0000542,3.03e-14,53;CL:0000051,3.03e-14,53;CL:0002087,5.15e-13,115;CL:0000037,1.49e-12,168;CL:0000988,1.10e-11,177;CL:0000898,2.96e-09,3;CL:0000625,6.71e-09,11;CL:0002031,3.91e-08,120;CL:0000810,1.36e-07,1;CL:0000895,1.36e-07,1;CL:0002436,1.36e-07,1;CL:0002427,1.36e-07,1;CL:0002428,1.36e-07,1;CL:0002429,1.36e-07,1;CL:0002433,1.36e-07,1;CL:0002431,1.36e-07,1;CL:0002432,1.36e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000790;3.78e-26;18!CL:0000051;1.14e-08;53!CL:0002427;1.27e-07;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;8.01e-13;2!UBERON:0005058;8.01e-13;2!UBERON:0009113;8.01e-13;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.97e-14,4;UBERON:0005058,2.97e-14,4;UBERON:0009113,2.97e-14,4;UBERON:0003295,2.97e-14,4;UBERON:0005562,2.97e-14,4;UBERON:0003351,1.15e-09,6;UBERON:0009722,6.71e-09,11;UBERON:0007690,6.71e-09,11;UBERON:0004177,2.39e-08,7;UBERON:0005057,2.39e-08,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0.393364276848904,0.767658796194425,0.619264493264304,0,0,0,0,0,0,2.21598163412751,0,1.08505435357926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68152568894461,0,9.83548850569165,6.28817220398664,7.60725546298184,0,2.93330039970231,0.946895611469467,0,0.222820913770347,0.589211814949674,0.221533894583621,0,0,0,0,0,0.289803085735052,3.26230438956533,1.33770414044857,2.09071047609954,0,3.06576394881537,1.37450978193052,1.01207876807801,0.318565414324097,0.651083453856419,0.950452044448374,0.451725357233318,0.255973222308837,1.24930726552346,0,0,2.82249440514625,2.13952156626806,2.89648807765598,0,0,0,0,0,0.289693037921647,0,0,0,0.221729397462564,0.087834785693126,0.0654895377488563,0,0,0,0,0,1.90792499444274,1.14398982156026,1.85728750664782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206651562351531,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0.211931901159562,0.300091096084402,0.206105058476878,0,0,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0.237270619111097,0,0.196221465125346,0,0,0,0,0,0,0,0,2.6487785964879,0,0.171567810298526,0,0,0,0,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.15249216323084,1.72502059887614,2.56686072559497,0,0,0,0,0,0,0,0,0.36807447515742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24060815673732,2.37285620900479,2.98837161849644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0.386682873168488,0.308097234229289,0,0,0.107420244868274,0.145016693914229,0.170453254832202,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0.284567373393656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0.111308705022906,0,0.844501632511974,0,0,0,0,0,0,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282706142867882,0.865554558968364,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0.330991955875499,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0.0633107959558787,0.782205530939212,0,0,0,0,0.916292769327325,0,0,0.248505071130865,0.235694034616795,0,0,0,0,0,0,0,0,0,0.837847203816763,0.229160424011684,0,0.199679000498991,0.858452096273142,1.11585728720936,0.739018197353989,0,0,0,0,0,0.393709926058995,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0.179287339332845,0.191915197319445,0,0.662091970365432,1.5256112259285,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0.684347351537318,0,0.533937062838473,0.157204305099666,0,0,0.395223263795889,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303859956177382,0,0,0,0,0,0,0.211312123358627,0,0,0.172214979660816,0,0,0,0,0,0,0,0.109209638192014,0,0.212574920101683,0,0.558644917973244,0,0,0,0.352675943690684,0,0.0642292250964595,0,0.319267718114302,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0.596748666348824,0.0752103283492573,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0,0,0,0,0,0,0.535701835878287,0.336283722218824,0,0,0.0887023701626388,0,0,0,0,0.472775363535873,0,0.078493092850514,0,0,0,0,0,0.142953088353313,0,0.116241425368125,0.347716544605159,0,0,0,0,0,0,0,0,0,0,0,0,0.294450700845729,0,0.647428837187895,1.12929087541872,0,0.485710993059139,0,0,0.356760272332706,0,0,0,0.0771741581079447,0,0,0.245148321753905,0,0,0,0.4226557275834,0,0.0939839179798536,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639701945702943,0.714193294391221,1.61472274590015,2.66921271472189,0,0.25458863311266,1.41482032270754,0.217716747896961,0,0.0673520530145875,0.0717222053926763,0,0,0.213454691755431,0,0,0,0,0,0,0,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0.393364276848904,0.767658796194425,0.619264493264304,0,0,0,0,0,0,2.21598163412751,0,1.08505435357926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68152568894461,0,9.83548850569165,6.28817220398664,7.60725546298184,0,2.93330039970231,0.946895611469467,0,0.222820913770347,0.589211814949674,0.221533894583621,0,0,0,0,0,0.289803085735052,3.26230438956533,1.33770414044857,2.09071047609954,0,3.06576394881537,1.37450978193052,1.01207876807801,0.318565414324097,0.651083453856419,0.950452044448374,0.451725357233318,0.255973222308837,1.24930726552346,0,0,2.82249440514625,2.13952156626806,2.89648807765598,0,0,0,0,0,0.289693037921647,0,0,0,0.221729397462564,0.087834785693126,0.0654895377488563,0,0,0,0,0,1.90792499444274,1.14398982156026,1.85728750664782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206651562351531,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0.211931901159562,0.300091096084402,0.206105058476878,0,0,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0.237270619111097,0,0.196221465125346,0,0,0,0,0,0,0,0,2.6487785964879,0,0.171567810298526,0,0,0,0,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.15249216323084,1.72502059887614,2.56686072559497,0,0,0,0,0,0,0,0,0.36807447515742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24060815673732,2.37285620900479,2.98837161849644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0.386682873168488,0.308097234229289,0,0,0.107420244868274,0.145016693914229,0.170453254832202,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0.284567373393656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0.111308705022906,0,0.844501632511974,0,0,0,0,0,0,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282706142867882,0.865554558968364,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0.330991955875499,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0.0633107959558787,0.782205530939212,0,0,0,0,0.916292769327325,0,0,0.248505071130865,0.235694034616795,0,0,0,0,0,0,0,0,0,0.837847203816763,0.229160424011684,0,0.199679000498991,0.858452096273142,1.11585728720936,0.739018197353989,0,0,0,0,0,0.393709926058995,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0.179287339332845,0.191915197319445,0,0.662091970365432,1.5256112259285,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0.684347351537318,0,0.533937062838473,0.157204305099666,0,0,0.395223263795889,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303859956177382,0,0,0,0,0,0,0.211312123358627,0,0,0.172214979660816,0,0,0,0,0,0,0,0.109209638192014,0,0.212574920101683,0,0.558644917973244,0,0,0,0.352675943690684,0,0.0642292250964595,0,0.319267718114302,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0.596748666348824,0.0752103283492573,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0,0,0,0,0,0,0.535701835878287,0.336283722218824,0,0,0.0887023701626388,0,0,0,0,0.472775363535873,0,0.078493092850514,0,0,0,0,0,0.142953088353313,0,0.116241425368125,0.347716544605159,0,0,0,0,0,0,0,0,0,0,0,0,0.294450700845729,0,0.647428837187895,1.12929087541872,0,0.485710993059139,0,0,0.356760272332706,0,0,0,0.0771741581079447,0,0,0.245148321753905,0,0,0,0.4226557275834,0,0.0939839179798536,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639701945702943,0.714193294391221,1.61472274590015,2.66921271472189,0,0.25458863311266,1.41482032270754,0.217716747896961,0,0.0673520530145875,0.0717222053926763,0,0,0.213454691755431,0,0,0,0,0,0,0,0 | ||
|short_description=p42@PDE4D | |short_description=p42@PDE4D | ||
}} | }} |
Latest revision as of 07:12, 18 September 2015
Short description: | p42@PDE4D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_42_at_PDE4D_5end |
Coexpression cluster: | C22_CD4_CD8_Natural_Basophils_CD14_Peripheral_CD19 |
Association with transcript: | -193bp_to_ENST00000515011, uc003jru.2_5end |
EntrezGene: | PDE4D |
HGNC: | 8783 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 2.97e-14 | 4 |
hemolymphoid system gland | 2.97e-14 | 4 |
thymic region | 2.97e-14 | 4 |
pharyngeal gland | 2.97e-14 | 4 |
thymus primordium | 2.97e-14 | 4 |
pharyngeal epithelium | 1.15e-09 | 6 |
entire pharyngeal arch endoderm | 6.71e-09 | 11 |
early pharyngeal endoderm | 6.71e-09 | 11 |
hemopoietic organ | 2.39e-08 | 7 |
immune organ | 2.39e-08 | 7 |