FFCP PHASE1:Hg19::chr16:447226..447242,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr16:447226..447242,+
|short_description=p3@NME4
|description=CAGE_peak_3_at_NME4_5end
|association_with_transcript=0bp_to_ENST00000433358_5end
|EntrezGene=48...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4833 | |EntrezGene=4833 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7852 | |HGNC=7852 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000433358_5end | |||
|cluster_id=chr16:447226..447242,+ | |||
|coexpression_cluster_id=C2373 | |||
|description=CAGE_peak_3_at_NME4_5end | |||
|id=chr16:447226..447242,+ | |||
|ontology_enrichment_celltype=CL:0000055!9.96e-33!180;CL:0000220!2.13e-23!246;CL:0002321!3.50e-23!248;CL:0000222!2.96e-21!119;CL:0000144!3.10e-21!625;CL:0000183!1.78e-19!59;CL:0000680!8.95e-19!57;CL:0000056!8.95e-19!57;CL:0000355!8.95e-19!57;CL:0002371!1.66e-18!591;CL:0000187!8.79e-18!54;CL:0000012!1.38e-17!682;CL:0000548!1.50e-17!679;CL:0000004!1.50e-17!679;CL:0000255!1.50e-17!679;CL:0000192!6.38e-17!42;CL:0000514!6.38e-17!42;CL:0000393!7.59e-16!60;CL:0000211!7.59e-16!60;CL:0000359!1.89e-14!32;CL:0000057!2.06e-10!75;CL:0000003!3.68e-08!722 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.12e-13;32!CL:0000192;2.02e-12;43!CL:0000187;2.69e-10;55!CL:0000393;1.98e-08;61!CL:0000211;1.98e-08;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.49e-23,250;CL:0000222,3.44e-21,121;CL:0000680,6.59e-19,58;CL:0000056,6.59e-19,58;CL:0000355,6.59e-19,58;CL:0000187,6.59e-18,55;CL:0000192,5.28e-17,43;CL:0000514,5.28e-17,43;CL:0000393,4.39e-16,61;CL:0000211,4.39e-16,61;CL:0000359,1.54e-14,32;CL:0000057,1.55e-10,76;CL:0000221,7.33e-07,72 | |||
|ontology_enrichment_development_v019=CL:0000514;2.02e-12;43!CL:0000355;1.69e-10;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!7.11e-20!143;UBERON:0000914!1.35e-18!83;UBERON:0002329!1.35e-18!83;UBERON:0003077!1.35e-18!83;UBERON:0003059!1.35e-18!83;UBERON:0007282!1.35e-18!83;UBERON:0009618!1.35e-18!83;UBERON:0007285!1.35e-18!83;UBERON:0004290!6.11e-18!70;UBERON:0002100!9.75e-18!216;UBERON:0000486!1.09e-17!82;UBERON:0002049!5.31e-17!79;UBERON:0007798!5.31e-17!79;UBERON:0001134!1.67e-16!61;UBERON:0002036!1.67e-16!61;UBERON:0003082!1.67e-16!61;UBERON:0000490!2.33e-16!138;UBERON:0003914!5.04e-16!118;UBERON:0002385!6.70e-16!63;UBERON:0001015!6.70e-16!63;UBERON:0000383!6.70e-16!63;UBERON:0004872!6.09e-15!84;UBERON:0000055!1.92e-14!69;UBERON:0001981!3.42e-14!60;UBERON:0007500!3.42e-14!60;UBERON:0004537!3.42e-14!60;UBERON:0006965!3.42e-14!60;UBERON:0001637!7.46e-14!42;UBERON:0003509!7.46e-14!42;UBERON:0004572!7.46e-14!42;UBERON:0004535!4.47e-12!110;UBERON:0001009!2.33e-11!113;UBERON:0003104!4.93e-11!238;UBERON:0009142!4.93e-11!238;UBERON:0004573!7.66e-11!33;UBERON:0004571!7.66e-11!33;UBERON:0000475!4.49e-10!365;UBERON:0000119!7.11e-09!312;UBERON:0000483!1.06e-08!309;UBERON:0009569!2.33e-08!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.00e-09;33!UBERON:0004571;1.00e-09;33!UBERON:0001637;1.77e-09;42!UBERON:0003509;1.77e-09;42!UBERON:0004572;1.77e-09;42!UBERON:0007500;1.47e-08;56!UBERON:0001981;1.47e-08;56!UBERON:0004537;1.47e-08;56!UBERON:0003914;8.23e-08;74!UBERON:0002049;2.66e-07;75!UBERON:0007798;2.66e-07;75!UBERON:0000055;4.40e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003104,1.28e-19,160;UBERON:0009142,1.28e-19,160;UBERON:0007503,3.16e-19,78;UBERON:0005256,1.98e-18,122;UBERON:0000490,2.62e-18,148;UBERON:0002329,4.29e-18,71;UBERON:0003059,4.29e-18,71;UBERON:0007282,4.29e-18,71;UBERON:0004290,4.29e-18,71;UBERON:0009618,4.29e-18,71;UBERON:0000486,7.39e-18,83;UBERON:0007524,8.78e-18,73;UBERON:0003077,2.00e-17,72;UBERON:0007285,2.00e-17,72;UBERON:0002100,6.02e-17,199;UBERON:0002049,9.74e-17,78;UBERON:0007798,9.74e-17,78;UBERON:0001134,1.22e-16,62;UBERON:0002036,1.22e-16,62;UBERON:0003082,1.22e-16,62;UBERON:0002385,4.86e-16,64;UBERON:0001015,4.86e-16,64;UBERON:0000383,4.86e-16,64;UBERON:0003914,5.88e-16,117;UBERON:0004872,1.32e-14,83;UBERON:0000055,3.59e-14,68;UBERON:0001637,6.13e-14,42;UBERON:0003509,6.13e-14,42;UBERON:0004572,6.13e-14,42;UBERON:0007500,6.51e-14,59;UBERON:0001981,6.51e-14,59;UBERON:0004537,6.51e-14,59;UBERON:0006965,6.51e-14,59;UBERON:0004535,2.21e-11,109;UBERON:0004573,6.60e-11,33;UBERON:0004571,6.60e-11,33;UBERON:0001009,1.09e-10,112;UBERON:0000119,9.41e-09,309;UBERON:0000483,1.40e-08,306;UBERON:0009569,5.67e-08,112 | |||
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| ||
|short_description=p3@NME4 | |||
}} | }} |
Latest revision as of 16:32, 16 September 2015
Short description: | p3@NME4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_NME4_5end |
Coexpression cluster: | C2373_Mesenchymal_Renal_leiomyoblastoma_Hepatic_Pericytes_Fibroblast_Smooth |
Association with transcript: | 0bp_to_ENST00000433358_5end |
EntrezGene: | NME4 |
HGNC: | 7852 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.49e-23 | 250 |
mesodermal cell | 3.44e-21 | 121 |
muscle precursor cell | 6.59e-19 | 58 |
myoblast | 6.59e-19 | 58 |
multi-potent skeletal muscle stem cell | 6.59e-19 | 58 |
muscle cell | 6.59e-18 | 55 |
smooth muscle cell | 5.28e-17 | 43 |
smooth muscle myoblast | 5.28e-17 | 43 |
electrically responsive cell | 4.39e-16 | 61 |
electrically active cell | 4.39e-16 | 61 |
vascular associated smooth muscle cell | 1.54e-14 | 32 |
fibroblast | 1.55e-10 | 76 |
ectodermal cell | 7.33e-07 | 72 |