FFCP PHASE1:Hg19::chr6:64516473..64516506,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-222bp_to_ENST00000429530_5end | |association_with_transcript=-222bp_to_ENST00000429530_5end | ||
|cluster_id=chr6:64516473..64516506,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_1_at_ENST00000429530_5end | |description=CAGE_peak_1_at_ENST00000429530_5end | ||
|id=chr6:64516473..64516506,+ | |id=chr6:64516473..64516506,+ | ||
|ontology_enrichment_celltype=CL:0002057!6.98e-35!42;CL:0000860!4.19e-33!45;CL:0002194!4.00e-20!63;CL:0000576!4.00e-20!63;CL:0000040!4.00e-20!63;CL:0000559!4.00e-20!63;CL:0000766!3.41e-19!76;CL:0002009!4.32e-19!65;CL:0000839!8.77e-17!70;CL:0000557!2.30e-16!71;CL:0000048!1.02e-09!430;CL:0000723!1.56e-09!436;CL:0000763!2.88e-09!112;CL:0000049!2.88e-09!112;CL:0000034!3.01e-09!444;CL:0002087!8.98e-09!119;CL:0002393!4.41e-08!9;CL:0002397!4.41e-08!9;CL:0000738!6.77e-08!140;CL:0002031!8.92e-07!124;CL:0002320!9.13e-07!365 | |ontology_enrichment_celltype=CL:0002057!6.98e-35!42;CL:0000860!4.19e-33!45;CL:0002194!4.00e-20!63;CL:0000576!4.00e-20!63;CL:0000040!4.00e-20!63;CL:0000559!4.00e-20!63;CL:0000766!3.41e-19!76;CL:0002009!4.32e-19!65;CL:0000839!8.77e-17!70;CL:0000557!2.30e-16!71;CL:0000048!1.02e-09!430;CL:0000723!1.56e-09!436;CL:0000763!2.88e-09!112;CL:0000049!2.88e-09!112;CL:0000034!3.01e-09!444;CL:0002087!8.98e-09!119;CL:0002393!4.41e-08!9;CL:0002397!4.41e-08!9;CL:0000738!6.77e-08!140;CL:0002031!8.92e-07!124;CL:0002320!9.13e-07!365 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.88e-41;33!CL:0002057;1.88e-41;33!CL:0000473;7.77e-29;39!CL:0000234;7.77e-29;39!CL:0000576;1.14e-25;48!CL:0000766;7.92e-20;69!CL:0002087;6.87e-09;104!CL:0000763;7.79e-09;100!CL:0002393;3.91e-08;6!CL:0002397;3.91e-08;6!CL:0000775;1.24e-07;3!CL:0002582;1.61e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.98e-48,42;CL:0002057,5.98e-48,42;CL:0000473,2.40e-41,48;CL:0000234,2.40e-41,48;CL:0000766,4.56e-34,72;CL:0002194,4.23e-32,59;CL:0000576,4.23e-32,59;CL:0000040,4.23e-32,59;CL:0000559,4.23e-32,59;CL:0002009,6.60e-31,61;CL:0000839,3.09e-28,66;CL:0000557,9.48e-28,67;CL:0000763,5.32e-21,108;CL:0000049,5.32e-21,108;CL:0000738,3.77e-17,136;CL:0002087,7.28e-16,115;CL:0002031,1.74e-13,120;CL:0000037,7.65e-13,168;CL:0002032,2.34e-12,161;CL:0000837,2.34e-12,161;CL:0000988,6.51e-12,177;CL:0000048,1.67e-08,427;CL:0000134,2.58e-08,354;CL:0000723,2.80e-08,433;CL:0002320,5.10e-08,361;CL:0000034,5.42e-08,441;CL:0000775,1.10e-07,3;CL:0002582,2.06e-07,3;CL:0000219,5.55e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;1.85e-32;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.16e-18!102;UBERON:0003061!2.16e-18!102;UBERON:0002193!6.23e-17!112;UBERON:0002371!7.38e-16!80;UBERON:0002204!2.69e-15!167;UBERON:0001474!8.24e-14!86;UBERON:0004765!8.47e-13!101;UBERON:0001434!8.47e-13!101;UBERON:0000926!1.97e-12!448;UBERON:0004120!1.97e-12!448;UBERON:0006603!1.97e-12!448;UBERON:0002405!5.24e-12!115;UBERON:0003081!6.66e-09!216 | |ontology_enrichment_uberon=UBERON:0002390!2.16e-18!102;UBERON:0003061!2.16e-18!102;UBERON:0002193!6.23e-17!112;UBERON:0002371!7.38e-16!80;UBERON:0002204!2.69e-15!167;UBERON:0001474!8.24e-14!86;UBERON:0004765!8.47e-13!101;UBERON:0001434!8.47e-13!101;UBERON:0000926!1.97e-12!448;UBERON:0004120!1.97e-12!448;UBERON:0006603!1.97e-12!448;UBERON:0002405!5.24e-12!115;UBERON:0003081!6.66e-09!216 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.49e-26,98;UBERON:0003061,5.49e-26,98;UBERON:0002371,6.15e-24,76;UBERON:0002193,4.43e-23,108;UBERON:0001474,7.42e-22,82;UBERON:0004765,1.65e-19,90;UBERON:0002405,9.85e-19,93;UBERON:0001434,4.22e-17,100;UBERON:0002204,6.40e-13,167;UBERON:0003081,7.15e-12,203;UBERON:0000926,3.09e-10,315;UBERON:0004120,3.09e-10,315;UBERON:0006603,3.09e-10,315;UBERON:0002384,1.29e-07,371 | |||
|phase1_expression=0,0,0,0,0,0,0,1.26343974685366,0,0.245733936501509,0,0,0,0.37129905888014,0.662794751455832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15148819429164,0.619264493264304,0,0,0,0,0,0,3.32397245119126,1.40381113229099,3.03815219002193,0,0,0,1.16318591023652,0,0.727752183563449,0.697287110717054,0.411167888021826,1.23882548358041,1.1507695692886,1.0246428261164,0.709446689665756,5.17118521104928,0.645484683583826,5.41705946377367,0.376484679085209,0.272906150057846,0.898893937780338,9.18251677112708,6.73950956859797,7.03270838378945,0.659702600373432,0.199463657621632,0,5.5139755339431,0,3.73693349397345,0.75374599577023,0,1.3031330682307,3.63239701580021,2.20966581592539,3.79754864929061,0.633765858935825,0.212604299965044,0.419317291016752,1.57260083605093,1.65194582125657,1.6072558669708,0.285012743741249,0,0.547992461293902,0,0.546138611262131,0,0.426730222566507,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,2.01210257911091,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0.198762407366705,0,0.347140501607594,0,0,0,0.208994966536811,0.258416759169329,0.35576626268671,0,0,0.760272105718513,0,0.367663080345869,0,0.267899184852239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0.134710672069688,0.490385709340376,0.151357427644931,0,0,1.24864030732128,0,0.298897361103602,0.117434498643765,0,0.280901613404497,0.204154171254893,0.122834317311768,0,0,0,0,0,0,0,0.277064115484183,0,0,0,0,0.179389635688862,0,0.211931901159562,0,0,0,0.18611685633159,0,0,0,0,0,0,0.10075209822764,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179117045405697,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0.57191197463259,0,0,0.325736184293735,1.77695974371273,0,0,0,0.099972991182057,0,0,0,0,0,0,0.723906533337896,0.821905290201534,0.358121926479791,0.112085143993527,0,0,0.128343036279748,0,0,0,0,0,1.49801404789436,0,4.14415513436035,0.49076596687656,0,0.542530047399471,0,0,0,0,0,0,1.03473071292505,0,0,0.347534457872331,0,0,0,1.2942852049117,0.426910231213777,0,0,0,0,0,0,0,0,0,0,1.85051632563187,0.887808626565635,2.21743321237285,0.519254429183621,1.04589340613963,0,0,0,0.34444334449382,2.00300284807389,0.393373244878272,0,0.0770153371044148,0,0,0.316654886678627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386682873168488,0.154048617114644,0.15350367472613,0.413509717453592,1.50388342815583,0.580066775656914,0.170453254832202,0,0,0,0.255225424989168,0,0,0.31481234683064,0,0.616067160352178,0,0,0.37064843820784,0,0,0.316379424718726,0,0.255897791311334,0.42793898803392,1.27281299170375,0,0.899362287916574,0,0.589062011728432,0.202182481573316,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0,0,0.573645408816206,0,0,1.06428319221179,0.211107635297664,0,0,0.349934720244983,0.0962221127255121,0,0,0,0,0,0,0,0.507447609232169,0,1.70894156152249,0.952927101831156,0.822724546172388,1.94541993357815,2.16012574895246,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0.227586896570999,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0.0769502585037971,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313932918407225,0,0,0,0,0,0.0870592065804026,0,0.171986032471617,0.0967563312890851,0,0,0,0,0,0,0.19871461170299,0,0,0,0,0,0,0,0,1.1524383839052,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0,0,0,0,0.0824158583811665,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0.211200673038813,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298509605773748,0.233713309847224,0.554805861502613,0.189403005275089,0.251567901752575,0.889811221596536,0,0,0,0.147855149989634,0.318593534327405,0,0.155262956876259,0.829412415681711,0.265841714557995,0,0.300515217994437,0,0,0.181848659202559,0.429642228169954,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0,0,0,0,0,0.192914038270915,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0.118193840883968,0.444925607568277,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0.414432328326074,0.17071847709395,0.691259661814092,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0.187967835959707,0,0,0,0.352894871715692,0.481448200135009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,1.26343974685366,0,0.245733936501509,0,0,0,0.37129905888014,0.662794751455832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15148819429164,0.619264493264304,0,0,0,0,0,0,3.32397245119126,1.40381113229099,3.03815219002193,0,0,0,1.16318591023652,0,0.727752183563449,0.697287110717054,0.411167888021826,1.23882548358041,1.1507695692886,1.0246428261164,0.709446689665756,5.17118521104928,0.645484683583826,5.41705946377367,0.376484679085209,0.272906150057846,0.898893937780338,9.18251677112708,6.73950956859797,7.03270838378945,0.659702600373432,0.199463657621632,0,5.5139755339431,0,3.73693349397345,0.75374599577023,0,1.3031330682307,3.63239701580021,2.20966581592539,3.79754864929061,0.633765858935825,0.212604299965044,0.419317291016752,1.57260083605093,1.65194582125657,1.6072558669708,0.285012743741249,0,0.547992461293902,0,0.546138611262131,0,0.426730222566507,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,2.01210257911091,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0.198762407366705,0,0.347140501607594,0,0,0,0.208994966536811,0.258416759169329,0.35576626268671,0,0,0.760272105718513,0,0.367663080345869,0,0.267899184852239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0.134710672069688,0.490385709340376,0.151357427644931,0,0,1.24864030732128,0,0.298897361103602,0.117434498643765,0,0.280901613404497,0.204154171254893,0.122834317311768,0,0,0,0,0,0,0,0.277064115484183,0,0,0,0,0.179389635688862,0,0.211931901159562,0,0,0,0.18611685633159,0,0,0,0,0,0,0.10075209822764,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179117045405697,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0.57191197463259,0,0,0.325736184293735,1.77695974371273,0,0,0,0.099972991182057,0,0,0,0,0,0,0.723906533337896,0.821905290201534,0.358121926479791,0.112085143993527,0,0,0.128343036279748,0,0,0,0,0,1.49801404789436,0,4.14415513436035,0.49076596687656,0,0.542530047399471,0,0,0,0,0,0,1.03473071292505,0,0,0.347534457872331,0,0,0,1.2942852049117,0.426910231213777,0,0,0,0,0,0,0,0,0,0,1.85051632563187,0.887808626565635,2.21743321237285,0.519254429183621,1.04589340613963,0,0,0,0.34444334449382,2.00300284807389,0.393373244878272,0,0.0770153371044148,0,0,0.316654886678627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386682873168488,0.154048617114644,0.15350367472613,0.413509717453592,1.50388342815583,0.580066775656914,0.170453254832202,0,0,0,0.255225424989168,0,0,0.31481234683064,0,0.616067160352178,0,0,0.37064843820784,0,0,0.316379424718726,0,0.255897791311334,0.42793898803392,1.27281299170375,0,0.899362287916574,0,0.589062011728432,0.202182481573316,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0,0,0.573645408816206,0,0,1.06428319221179,0.211107635297664,0,0,0.349934720244983,0.0962221127255121,0,0,0,0,0,0,0,0.507447609232169,0,1.70894156152249,0.952927101831156,0.822724546172388,1.94541993357815,2.16012574895246,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0.227586896570999,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0.0769502585037971,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313932918407225,0,0,0,0,0,0.0870592065804026,0,0.171986032471617,0.0967563312890851,0,0,0,0,0,0,0.19871461170299,0,0,0,0,0,0,0,0,1.1524383839052,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0,0,0,0,0.0824158583811665,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0.211200673038813,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298509605773748,0.233713309847224,0.554805861502613,0.189403005275089,0.251567901752575,0.889811221596536,0,0,0,0.147855149989634,0.318593534327405,0,0.155262956876259,0.829412415681711,0.265841714557995,0,0.300515217994437,0,0,0.181848659202559,0.429642228169954,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0,0,0,0,0,0.192914038270915,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0.118193840883968,0.444925607568277,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0.414432328326074,0.17071847709395,0.691259661814092,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0.187967835959707,0,0,0,0.352894871715692,0.481448200135009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | ||
|short_description=p1@ENST00000429530 | |short_description=p1@ENST00000429530 | ||
}} | }} |
Latest revision as of 02:43, 31 July 2015
Short description: | p1@ENST00000429530 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000429530_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -222bp_to_ENST00000429530_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.98e-48 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.98e-48 | 42 |
defensive cell | 2.40e-41 | 48 |
phagocyte | 2.40e-41 | 48 |
myeloid leukocyte | 4.56e-34 | 72 |
monopoietic cell | 4.23e-32 | 59 |
monocyte | 4.23e-32 | 59 |
monoblast | 4.23e-32 | 59 |
promonocyte | 4.23e-32 | 59 |
macrophage dendritic cell progenitor | 6.60e-31 | 61 |
myeloid lineage restricted progenitor cell | 3.09e-28 | 66 |
granulocyte monocyte progenitor cell | 9.48e-28 | 67 |
myeloid cell | 5.32e-21 | 108 |
common myeloid progenitor | 5.32e-21 | 108 |
leukocyte | 3.77e-17 | 136 |
nongranular leukocyte | 7.28e-16 | 115 |
hematopoietic lineage restricted progenitor cell | 1.74e-13 | 120 |
hematopoietic stem cell | 7.65e-13 | 168 |
hematopoietic oligopotent progenitor cell | 2.34e-12 | 161 |
hematopoietic multipotent progenitor cell | 2.34e-12 | 161 |
hematopoietic cell | 6.51e-12 | 177 |
multi fate stem cell | 1.67e-08 | 427 |
mesenchymal cell | 2.58e-08 | 354 |
somatic stem cell | 2.80e-08 | 433 |
connective tissue cell | 5.10e-08 | 361 |
stem cell | 5.42e-08 | 441 |
neutrophil | 1.10e-07 | 3 |
visceral preadipocyte | 2.06e-07 | 3 |
motile cell | 5.55e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.49e-26 | 98 |
blood island | 5.49e-26 | 98 |
bone marrow | 6.15e-24 | 76 |
hemolymphoid system | 4.43e-23 | 108 |
bone element | 7.42e-22 | 82 |
skeletal element | 1.65e-19 | 90 |
immune system | 9.85e-19 | 93 |
skeletal system | 4.22e-17 | 100 |
musculoskeletal system | 6.40e-13 | 167 |
lateral plate mesoderm | 7.15e-12 | 203 |
mesoderm | 3.09e-10 | 315 |
mesoderm-derived structure | 3.09e-10 | 315 |
presumptive mesoderm | 3.09e-10 | 315 |
connective tissue | 1.29e-07 | 371 |