FFCP PHASE1:Hg19::chr7:142552570..142552579,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2051 | |EntrezGene=2051 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3396 | |HGNC=3396 | ||
|TSSclassifier=strong | |||
|UniProt=O15197 | |UniProt=O15197 | ||
|association_with_transcript=-212bp_to_ENST00000392957,NM_004445,uc003wbs.2,uc010lot.1,uc011kst.1,uc011ksu.1_5end | |association_with_transcript=-212bp_to_ENST00000392957,NM_004445,uc003wbs.2,uc010lot.1,uc011kst.1,uc011ksu.1_5end | ||
|cluster_id=chr7:142552570..142552579,+ | |||
|description=CAGE_peak_8_at_EPHB6_5end | |description=CAGE_peak_8_at_EPHB6_5end | ||
|id=chr7:142552570..142552579,+ | |id=chr7:142552570..142552579,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010122;2.00e-08;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.34e-19!57;UBERON:0005068!5.34e-19!57;UBERON:0006241!5.34e-19!57;UBERON:0007135!5.34e-19!57;UBERON:0001017!1.57e-17!82;UBERON:0005743!3.86e-17!86;UBERON:0002616!1.27e-16!59;UBERON:0002020!2.02e-16!34;UBERON:0003528!2.02e-16!34;UBERON:0001869!2.36e-16!32;UBERON:0002619!4.03e-16!22;UBERON:0002780!7.75e-16!41;UBERON:0001890!7.75e-16!41;UBERON:0006240!7.75e-16!41;UBERON:0001950!8.67e-16!20;UBERON:0003075!8.69e-16!86;UBERON:0007284!8.69e-16!86;UBERON:0003080!2.70e-15!42;UBERON:0001893!4.78e-15!34;UBERON:0000955!6.54e-15!69;UBERON:0006238!6.54e-15!69;UBERON:0002346!1.35e-14!90;UBERON:0000073!1.87e-14!94;UBERON:0001016!1.87e-14!94;UBERON:0003056!3.67e-14!61;UBERON:0002791!7.16e-14!33;UBERON:0000956!1.14e-13!25;UBERON:0000203!1.14e-13!25;UBERON:0007023!2.37e-13!115;UBERON:0000153!2.51e-10!129;UBERON:0007811!2.51e-10!129;UBERON:0000033!8.68e-10!123;UBERON:0000200!1.52e-07!6;UBERON:0001871!2.43e-07!7;UBERON:0004121!2.88e-07!169;UBERON:0000924!7.48e-07!173;UBERON:0006601!7.48e-07!173 | |ontology_enrichment_uberon=UBERON:0001049!5.34e-19!57;UBERON:0005068!5.34e-19!57;UBERON:0006241!5.34e-19!57;UBERON:0007135!5.34e-19!57;UBERON:0001017!1.57e-17!82;UBERON:0005743!3.86e-17!86;UBERON:0002616!1.27e-16!59;UBERON:0002020!2.02e-16!34;UBERON:0003528!2.02e-16!34;UBERON:0001869!2.36e-16!32;UBERON:0002619!4.03e-16!22;UBERON:0002780!7.75e-16!41;UBERON:0001890!7.75e-16!41;UBERON:0006240!7.75e-16!41;UBERON:0001950!8.67e-16!20;UBERON:0003075!8.69e-16!86;UBERON:0007284!8.69e-16!86;UBERON:0003080!2.70e-15!42;UBERON:0001893!4.78e-15!34;UBERON:0000955!6.54e-15!69;UBERON:0006238!6.54e-15!69;UBERON:0002346!1.35e-14!90;UBERON:0000073!1.87e-14!94;UBERON:0001016!1.87e-14!94;UBERON:0003056!3.67e-14!61;UBERON:0002791!7.16e-14!33;UBERON:0000956!1.14e-13!25;UBERON:0000203!1.14e-13!25;UBERON:0007023!2.37e-13!115;UBERON:0000153!2.51e-10!129;UBERON:0007811!2.51e-10!129;UBERON:0000033!8.68e-10!123;UBERON:0000200!1.52e-07!6;UBERON:0001871!2.43e-07!7;UBERON:0004121!2.88e-07!169;UBERON:0000924!7.48e-07!173;UBERON:0006601!7.48e-07!173 | ||
|ontology_enrichment_uberon_v019=UBERON:0001872;4.28e-26;5!UBERON:0001870;7.14e-20;3!UBERON:0001950;6.93e-17;20!UBERON:0002581;1.54e-15;1!UBERON:0002619;2.01e-15;22!UBERON:0001869;7.04e-15;32!UBERON:0002791;8.75e-15;32!UBERON:0001893;2.72e-14;34!UBERON:0003528;8.45e-14;34!UBERON:0002020;8.45e-14;34!UBERON:0000956;1.20e-13;25!UBERON:0000203;1.20e-13;25!UBERON:0000200;1.99e-10;6!UBERON:0002780;1.56e-09;41!UBERON:0001890;1.56e-09;41!UBERON:0001873;2.00e-08;2!UBERON:0002702;2.00e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001872,4.29e-26,5;UBERON:0001870,1.27e-19,3;UBERON:0001950,8.49e-17,20;UBERON:0002581,9.99e-16,1;UBERON:0002619,2.42e-15,22;UBERON:0002791,3.35e-15,32;UBERON:0001869,3.35e-15,32;UBERON:0003528,2.55e-14,34;UBERON:0002020,2.55e-14,34;UBERON:0001893,2.55e-14,34;UBERON:0000956,1.41e-13,25;UBERON:0000203,1.41e-13,25;UBERON:0002780,6.82e-12,41;UBERON:0001890,6.82e-12,41;UBERON:0003080,6.82e-12,41;UBERON:0006240,6.82e-12,41;UBERON:0000200,2.19e-10,6;UBERON:0000955,1.84e-09,68;UBERON:0006238,1.84e-09,68;UBERON:0000073,3.46e-09,53;UBERON:0002616,3.46e-09,53;UBERON:0001049,1.09e-08,56;UBERON:0005068,1.09e-08,56;UBERON:0006241,1.09e-08,56;UBERON:0007135,1.09e-08,56;UBERON:0001873,1.39e-08,2;UBERON:0010122,1.39e-08,2;UBERON:0002702,2.87e-08,2;UBERON:0003056,5.81e-08,61;UBERON:0001017,6.82e-08,81;UBERON:0001016,4.59e-07,89 | |||
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| ||
|short_description=p8@EPHB6 | |short_description=p8@EPHB6 | ||
}} | }} |
Latest revision as of 22:29, 16 September 2015
Short description: | p8@EPHB6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_EPHB6_5end |
Coexpression cluster: | NA |
Association with transcript: | -212bp_to_ENST00000392957, NM_004445, uc003wbs.2, uc010lot.1, uc011kst.1, uc011ksu.1_5end |
EntrezGene: | EPHB6 |
HGNC: | 3396 |
UniProt: | O15197 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
parietal lobe | 4.29e-26 | 5 |
frontal cortex | 1.27e-19 | 3 |
neocortex | 8.49e-17 | 20 |
postcentral gyrus | 9.99e-16 | 1 |
regional part of cerebral cortex | 2.42e-15 | 22 |
regional part of telencephalon | 3.35e-15 | 32 |
cerebral hemisphere | 3.35e-15 | 32 |
brain grey matter | 2.55e-14 | 34 |
gray matter | 2.55e-14 | 34 |
telencephalon | 2.55e-14 | 34 |
cerebral cortex | 1.41e-13 | 25 |
pallium | 1.41e-13 | 25 |
regional part of forebrain | 6.82e-12 | 41 |
forebrain | 6.82e-12 | 41 |
anterior neural tube | 6.82e-12 | 41 |
future forebrain | 6.82e-12 | 41 |
gyrus | 2.19e-10 | 6 |
brain | 1.84e-09 | 68 |
future brain | 1.84e-09 | 68 |
regional part of nervous system | 3.46e-09 | 53 |
regional part of brain | 3.46e-09 | 53 |
neural tube | 1.09e-08 | 56 |
neural rod | 1.09e-08 | 56 |
future spinal cord | 1.09e-08 | 56 |
neural keel | 1.09e-08 | 56 |
caudate nucleus | 1.39e-08 | 2 |
future caudate nucleus | 1.39e-08 | 2 |
middle frontal gyrus | 2.87e-08 | 2 |
pre-chordal neural plate | 5.81e-08 | 61 |
central nervous system | 6.82e-08 | 81 |
nervous system | 4.59e-07 | 89 |