FFCP PHASE1:Hg19::chr7:158196067..158196075,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:158196067..158196075,- | |||
|coexpression_cluster_id=C195 | |||
|description=CAGE_peak_at_chr7:158196067..158196075,- | |description=CAGE_peak_at_chr7:158196067..158196075,- | ||
|id=chr7:158196067..158196075,- | |id=chr7:158196067..158196075,- | ||
|ontology_enrichment_celltype=CL:0002076!5.38e-35!43;CL:0002368!1.74e-29!13;CL:0000223!1.74e-26!59;CL:0002202!8.84e-16!9;CL:0002632!8.84e-16!9;CL:0000068!5.23e-13!3;CL:0000069!5.23e-13!3;CL:0000307!5.23e-13!3;CL:0000377!5.23e-13!3;CL:0002328!9.07e-13!3;CL:0002251!2.67e-10!21;CL:0000066!1.27e-08!254 | |ontology_enrichment_celltype=CL:0002076!5.38e-35!43;CL:0002368!1.74e-29!13;CL:0000223!1.74e-26!59;CL:0002202!8.84e-16!9;CL:0002632!8.84e-16!9;CL:0000068!5.23e-13!3;CL:0000069!5.23e-13!3;CL:0000307!5.23e-13!3;CL:0000377!5.23e-13!3;CL:0002328!9.07e-13!3;CL:0002251!2.67e-10!21;CL:0000066!1.27e-08!254 | ||
|ontology_enrichment_celltype_v019=CL:0000307;4.97e-59;3!CL:0002368;3.84e-54;13!CL:0002202;4.33e-35;9!CL:0002632;4.33e-35;9!CL:0002252;2.54e-21;1!CL:0002076;5.15e-21;42!CL:0002328;7.25e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,6.07e-59,3;CL:0000069,6.07e-59,3;CL:0000307,6.07e-59,3;CL:0000377,6.07e-59,3;CL:0002368,3.84e-54,13;CL:0002202,4.34e-35,9;CL:0002632,4.34e-35,9;CL:0002076,1.09e-29,42;CL:0000223,1.90e-21,58;CL:0002252,2.82e-21,1;CL:0002328,6.78e-08,3 | |||
|ontology_enrichment_development_v019=CL:0000377;4.97e-59;3!CL:0000223;9.34e-17;58 | |||
|ontology_enrichment_disease=DOID:1749!2.07e-09!14 | |ontology_enrichment_disease=DOID:1749!2.07e-09!14 | ||
|ontology_enrichment_disease_v019=DOID:3151;2.54e-21;1!DOID:3149;2.54e-21;1!DOID:3451;2.35e-11;2!DOID:4159;2.35e-11;2!DOID:0060122;2.35e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,2.30e-21,1;DOID:3149,2.30e-21,1;DOID:3451,2.23e-11,2;DOID:4159,2.23e-11,2;DOID:0060122,2.23e-11,2 | |||
|ontology_enrichment_uberon=UBERON:0001004!1.47e-18!72;UBERON:0000065!4.16e-15!53;UBERON:0004119!4.49e-14!169;UBERON:0000925!4.49e-14!169;UBERON:0006595!4.49e-14!169;UBERON:0007196!2.53e-13!14;UBERON:0001558!2.53e-13!14;UBERON:0004815!9.07e-13!3;UBERON:0002031!9.07e-13!3;UBERON:0003729!1.66e-12!5;UBERON:0005178!1.09e-11!34;UBERON:0002224!1.09e-11!34;UBERON:0005181!2.75e-11!35;UBERON:0000161!1.28e-10!35;UBERON:0000166!3.71e-10!21;UBERON:0002185!1.12e-09!4;UBERON:0003126!1.47e-09!7;UBERON:0001005!1.47e-09!7;UBERON:0003343!1.53e-09!4;UBERON:0004785!1.53e-09!4;UBERON:0000165!3.95e-09!28;UBERON:0000930!3.95e-09!28;UBERON:0001007!4.80e-09!155;UBERON:0001555!4.80e-09!155;UBERON:0007026!4.80e-09!155;UBERON:0005153!2.50e-08!37;UBERON:0000344!1.27e-07!12;UBERON:0001041!2.80e-07!98;UBERON:0000077!6.63e-07!130;UBERON:0004921!6.63e-07!129;UBERON:0004185!6.63e-07!129;UBERON:0000915!7.30e-07!52;UBERON:0008947!8.31e-07!38;UBERON:0003258!8.31e-07!38 | |ontology_enrichment_uberon=UBERON:0001004!1.47e-18!72;UBERON:0000065!4.16e-15!53;UBERON:0004119!4.49e-14!169;UBERON:0000925!4.49e-14!169;UBERON:0006595!4.49e-14!169;UBERON:0007196!2.53e-13!14;UBERON:0001558!2.53e-13!14;UBERON:0004815!9.07e-13!3;UBERON:0002031!9.07e-13!3;UBERON:0003729!1.66e-12!5;UBERON:0005178!1.09e-11!34;UBERON:0002224!1.09e-11!34;UBERON:0005181!2.75e-11!35;UBERON:0000161!1.28e-10!35;UBERON:0000166!3.71e-10!21;UBERON:0002185!1.12e-09!4;UBERON:0003126!1.47e-09!7;UBERON:0001005!1.47e-09!7;UBERON:0003343!1.53e-09!4;UBERON:0004785!1.53e-09!4;UBERON:0000165!3.95e-09!28;UBERON:0000930!3.95e-09!28;UBERON:0001007!4.80e-09!155;UBERON:0001555!4.80e-09!155;UBERON:0007026!4.80e-09!155;UBERON:0005153!2.50e-08!37;UBERON:0000344!1.27e-07!12;UBERON:0001041!2.80e-07!98;UBERON:0000077!6.63e-07!130;UBERON:0004921!6.63e-07!129;UBERON:0004185!6.63e-07!129;UBERON:0000915!7.30e-07!52;UBERON:0008947!8.31e-07!38;UBERON:0003258!8.31e-07!38 | ||
|ontology_enrichment_uberon_v019=UBERON:0003126;8.12e-26;7!UBERON:0001005;8.12e-26;7!UBERON:0007196;2.82e-21;15!UBERON:0001558;2.82e-21;15!UBERON:0005178;2.76e-14;34!UBERON:0002224;2.76e-14;34!UBERON:0005181;1.01e-12;35!UBERON:0000065;1.45e-12;44!UBERON:0000072;1.66e-08;37!UBERON:0001043;5.36e-08;3!UBERON:0004815;7.25e-08;3!UBERON:0002031;7.25e-08;3!UBERON:0001004;2.08e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,8.85e-26,7;UBERON:0001005,8.85e-26,7;UBERON:0007196,2.82e-21,15;UBERON:0001558,2.82e-21,15;UBERON:0005178,1.28e-14,34;UBERON:0002224,1.28e-14,34;UBERON:0005181,3.31e-14,35;UBERON:0000065,4.33e-13,54;UBERON:0001004,7.45e-13,74;UBERON:0000915,1.32e-09,52;UBERON:0008947,1.23e-08,38;UBERON:0003258,1.23e-08,38;UBERON:0001043,5.54e-08,3;UBERON:0009143,5.54e-08,3;UBERON:0004815,6.78e-08,3;UBERON:0002031,6.78e-08,3;UBERON:0004119,1.74e-07,160;UBERON:0000925,1.74e-07,160;UBERON:0006595,1.74e-07,160;UBERON:0000072,4.87e-07,47 | |||
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| ||
|short_description=p@chr7:158196067..158196075,- | |short_description=p@chr7:158196067..158196075,- | ||
}} | }} |
Latest revision as of 08:04, 31 July 2015
Short description: | p@chr7:158196067..158196075, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:158196067..158196075, - |
Coexpression cluster: | C195_Small_Gingival_Bronchial_Smooth_mesenchymal_Urothelial_Tracheal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 6.07e-59 | 3 |
branched duct epithelial cell | 6.07e-59 | 3 |
tracheal epithelial cell | 6.07e-59 | 3 |
tracheoblast | 6.07e-59 | 3 |
respiratory epithelial cell | 3.84e-54 | 13 |
epithelial cell of tracheobronchial tree | 4.34e-35 | 9 |
epithelial cell of lower respiratory tract | 4.34e-35 | 9 |
endo-epithelial cell | 1.09e-29 | 42 |
endodermal cell | 1.90e-21 | 58 |
epithelial cell of esophagus | 2.82e-21 | 1 |
bronchial epithelial cell | 6.78e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
trachea | 8.85e-26 | 7 |
respiratory airway | 8.85e-26 | 7 |
tracheobronchial tree | 2.82e-21 | 15 |
lower respiratory tract | 2.82e-21 | 15 |
thoracic cavity element | 1.28e-14 | 34 |
thoracic cavity | 1.28e-14 | 34 |
thoracic segment organ | 3.31e-14 | 35 |
respiratory tract | 4.33e-13 | 54 |
respiratory system | 7.45e-13 | 74 |
thoracic segment of trunk | 1.32e-09 | 52 |
respiratory primordium | 1.23e-08 | 38 |
endoderm of foregut | 1.23e-08 | 38 |
esophagus | 5.54e-08 | 3 |
esophageal region | 5.54e-08 | 3 |
lower respiratory tract epithelium | 6.78e-08 | 3 |
epithelium of bronchus | 6.78e-08 | 3 |
endoderm-derived structure | 1.74e-07 | 160 |
endoderm | 1.74e-07 | 160 |
presumptive endoderm | 1.74e-07 | 160 |
segment of respiratory tract | 4.87e-07 | 47 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 2.30e-21 | 1 |
keratoacanthoma | 2.30e-21 | 1 |
skin carcinoma | 2.23e-11 | 2 |
skin cancer | 2.23e-11 | 2 |
integumentary system cancer | 2.23e-11 | 2 |