FFCP PHASE1:Hg19::chr10:119135001..119135008,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=118987 | |EntrezGene=118987 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26974 | |HGNC=26974 | ||
|TSSclassifier=strong | |||
|UniProt=Q8NEN9 | |UniProt=Q8NEN9 | ||
|association_with_transcript=-23bp_to_ENST00000334464_5end | |association_with_transcript=-23bp_to_ENST00000334464_5end | ||
|cluster_id=chr10:119135001..119135008,- | |||
|description=CAGE_peak_3_at_PDZD8_5end | |description=CAGE_peak_3_at_PDZD8_5end | ||
|id=chr10:119135001..119135008,- | |id=chr10:119135001..119135008,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010122;9.86e-08;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002780!4.05e-15!41;UBERON:0001890!4.05e-15!41;UBERON:0006240!4.05e-15!41;UBERON:0001049!7.93e-15!57;UBERON:0005068!7.93e-15!57;UBERON:0006241!7.93e-15!57;UBERON:0007135!7.93e-15!57;UBERON:0003080!2.18e-14!42;UBERON:0002020!4.61e-14!34;UBERON:0003528!4.61e-14!34;UBERON:0001893!5.42e-14!34;UBERON:0002791!1.97e-13!33;UBERON:0001869!4.45e-13!32;UBERON:0003075!9.67e-13!86;UBERON:0007284!9.67e-13!86;UBERON:0002346!3.05e-12!90;UBERON:0005743!7.62e-12!86;UBERON:0000955!2.13e-11!69;UBERON:0006238!2.13e-11!69;UBERON:0001017!2.95e-11!82;UBERON:0000073!3.54e-11!94;UBERON:0001016!3.54e-11!94;UBERON:0007023!3.77e-11!115;UBERON:0002616!4.85e-11!59;UBERON:0000956!2.18e-10!25;UBERON:0000203!2.18e-10!25;UBERON:0003056!2.20e-10!61;UBERON:0002619!1.05e-09!22;UBERON:0000153!2.63e-09!129;UBERON:0007811!2.63e-09!129;UBERON:0000033!2.69e-09!123;UBERON:0001950!9.24e-09!20;UBERON:0004121!1.64e-08!169;UBERON:0000924!2.37e-08!173;UBERON:0006601!2.37e-08!173 | |ontology_enrichment_uberon=UBERON:0002780!4.05e-15!41;UBERON:0001890!4.05e-15!41;UBERON:0006240!4.05e-15!41;UBERON:0001049!7.93e-15!57;UBERON:0005068!7.93e-15!57;UBERON:0006241!7.93e-15!57;UBERON:0007135!7.93e-15!57;UBERON:0003080!2.18e-14!42;UBERON:0002020!4.61e-14!34;UBERON:0003528!4.61e-14!34;UBERON:0001893!5.42e-14!34;UBERON:0002791!1.97e-13!33;UBERON:0001869!4.45e-13!32;UBERON:0003075!9.67e-13!86;UBERON:0007284!9.67e-13!86;UBERON:0002346!3.05e-12!90;UBERON:0005743!7.62e-12!86;UBERON:0000955!2.13e-11!69;UBERON:0006238!2.13e-11!69;UBERON:0001017!2.95e-11!82;UBERON:0000073!3.54e-11!94;UBERON:0001016!3.54e-11!94;UBERON:0007023!3.77e-11!115;UBERON:0002616!4.85e-11!59;UBERON:0000956!2.18e-10!25;UBERON:0000203!2.18e-10!25;UBERON:0003056!2.20e-10!61;UBERON:0002619!1.05e-09!22;UBERON:0000153!2.63e-09!129;UBERON:0007811!2.63e-09!129;UBERON:0000033!2.69e-09!123;UBERON:0001950!9.24e-09!20;UBERON:0004121!1.64e-08!169;UBERON:0000924!2.37e-08!173;UBERON:0006601!2.37e-08!173 | ||
|ontology_enrichment_uberon_v019=UBERON:0005383;8.74e-18;3!UBERON:0005382;8.74e-18;3!UBERON:0001874;9.12e-14;1!UBERON:0000369;1.38e-13;4!UBERON:0002435;1.38e-13;4!UBERON:0000204;1.38e-13;4!UBERON:0002021;6.79e-11;5!UBERON:0002791;5.04e-10;32!UBERON:0001869;2.47e-09;32!UBERON:0003528;1.01e-08;34!UBERON:0002020;1.01e-08;34!UBERON:0009663;3.77e-08;7!UBERON:0001893;9.07e-08;34!UBERON:0001873;9.86e-08;2!UBERON:0000473;3.90e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005383,1.08e-17,3;UBERON:0005382,1.08e-17,3;UBERON:0001874,1.25e-13,1;UBERON:0000369,1.62e-13,4;UBERON:0002435,1.62e-13,4;UBERON:0000204,1.62e-13,4;UBERON:0010082,1.62e-13,4;UBERON:0002021,7.89e-11,5;UBERON:0002791,2.26e-09,32;UBERON:0001869,2.26e-09,32;UBERON:0003528,7.84e-09,34;UBERON:0002020,7.84e-09,34;UBERON:0001893,7.84e-09,34;UBERON:0009663,4.12e-08,7;UBERON:0000073,6.21e-08,53;UBERON:0002616,6.21e-08,53;UBERON:0001873,9.87e-08,2;UBERON:0010122,9.87e-08,2;UBERON:0001049,1.70e-07,56;UBERON:0005068,1.70e-07,56;UBERON:0006241,1.70e-07,56;UBERON:0007135,1.70e-07,56;UBERON:0002780,2.42e-07,41;UBERON:0001890,2.42e-07,41;UBERON:0003080,2.42e-07,41;UBERON:0006240,2.42e-07,41;UBERON:0000473,3.90e-07,8 | |||
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| ||
|short_description=p3@PDZD8 | |short_description=p3@PDZD8 | ||
}} | }} |
Latest revision as of 15:29, 16 September 2015
Short description: | p3@PDZD8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PDZD8_5end |
Coexpression cluster: | NA |
Association with transcript: | -23bp_to_ENST00000334464_5end |
EntrezGene: | PDZD8 |
HGNC: | 26974 |
UniProt: | Q8NEN9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
caudate-putamen | 1.08e-17 | 3 |
dorsal striatum | 1.08e-17 | 3 |
putamen | 1.25e-13 | 1 |
corpus striatum | 1.62e-13 | 4 |
striatum | 1.62e-13 | 4 |
ventral part of telencephalon | 1.62e-13 | 4 |
future corpus striatum | 1.62e-13 | 4 |
occipital lobe | 7.89e-11 | 5 |
regional part of telencephalon | 2.26e-09 | 32 |
cerebral hemisphere | 2.26e-09 | 32 |
brain grey matter | 7.84e-09 | 34 |
gray matter | 7.84e-09 | 34 |
telencephalon | 7.84e-09 | 34 |
telencephalic nucleus | 4.12e-08 | 7 |
regional part of nervous system | 6.21e-08 | 53 |
regional part of brain | 6.21e-08 | 53 |
caudate nucleus | 9.87e-08 | 2 |
future caudate nucleus | 9.87e-08 | 2 |
neural tube | 1.70e-07 | 56 |
neural rod | 1.70e-07 | 56 |
future spinal cord | 1.70e-07 | 56 |
neural keel | 1.70e-07 | 56 |
regional part of forebrain | 2.42e-07 | 41 |
forebrain | 2.42e-07 | 41 |
anterior neural tube | 2.42e-07 | 41 |
future forebrain | 2.42e-07 | 41 |
testis | 3.90e-07 | 8 |