FFCP PHASE1:Hg19::chr10:23722929..23722967,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:23722929..23722967,+ | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_at_chr10:23722929..23722967,+ | |description=CAGE_peak_at_chr10:23722929..23722967,+ | ||
|id=chr10:23722929..23722967,+ | |id=chr10:23722929..23722967,+ | ||
|ontology_enrichment_celltype=CL:0002057!9.21e-118!42;CL:0000860!3.61e-109!45;CL:0002194!1.85e-73!63;CL:0000576!1.85e-73!63;CL:0000040!1.85e-73!63;CL:0000559!1.85e-73!63;CL:0002009!6.76e-71!65;CL:0000766!7.27e-69!76;CL:0000839!4.02e-65!70;CL:0000557!4.60e-64!71;CL:0000738!7.58e-52!140;CL:0000763!1.36e-47!112;CL:0000049!1.36e-47!112;CL:0002087!2.38e-46!119;CL:0000037!7.60e-40!172;CL:0000566!7.60e-40!172;CL:0002031!7.31e-38!124;CL:0000988!5.89e-37!182;CL:0002032!2.53e-33!165;CL:0000837!2.53e-33!165;CL:0002393!1.14e-20!9;CL:0002397!1.14e-20!9;CL:0000134!2.70e-13!358;CL:0002320!8.58e-13!365;CL:0000219!4.96e-11!390;CL:0000048!2.77e-10!430;CL:0000723!5.81e-10!436;CL:0000034!1.51e-09!444;CL:0000767!1.86e-09!3;CL:0000842!2.80e-09!3;CL:0000224!4.64e-07!4 | |ontology_enrichment_celltype=CL:0002057!9.21e-118!42;CL:0000860!3.61e-109!45;CL:0002194!1.85e-73!63;CL:0000576!1.85e-73!63;CL:0000040!1.85e-73!63;CL:0000559!1.85e-73!63;CL:0002009!6.76e-71!65;CL:0000766!7.27e-69!76;CL:0000839!4.02e-65!70;CL:0000557!4.60e-64!71;CL:0000738!7.58e-52!140;CL:0000763!1.36e-47!112;CL:0000049!1.36e-47!112;CL:0002087!2.38e-46!119;CL:0000037!7.60e-40!172;CL:0000566!7.60e-40!172;CL:0002031!7.31e-38!124;CL:0000988!5.89e-37!182;CL:0002032!2.53e-33!165;CL:0000837!2.53e-33!165;CL:0002393!1.14e-20!9;CL:0002397!1.14e-20!9;CL:0000134!2.70e-13!358;CL:0002320!8.58e-13!365;CL:0000219!4.96e-11!390;CL:0000048!2.77e-10!430;CL:0000723!5.81e-10!436;CL:0000034!1.51e-09!444;CL:0000767!1.86e-09!3;CL:0000842!2.80e-09!3;CL:0000224!4.64e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.69e-99;33!CL:0002057;2.69e-99;33!CL:0000473;2.01e-66;39!CL:0000234;2.01e-66;39!CL:0000576;4.61e-64;48!CL:0000766;1.81e-36;69!CL:0002393;5.43e-17;6!CL:0002397;5.43e-17;6!CL:0000763;1.79e-16;100!CL:0002087;9.71e-16;104!CL:0000738;2.14e-10;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,6.46e-125,42;CL:0002057,6.46e-125,42;CL:0000473,1.02e-108,48;CL:0000234,1.02e-108,48;CL:0002194,4.98e-86,59;CL:0000576,4.98e-86,59;CL:0000040,4.98e-86,59;CL:0000559,4.98e-86,59;CL:0002009,4.22e-83,61;CL:0000839,1.52e-76,66;CL:0000557,2.39e-75,67;CL:0000766,6.19e-75,72;CL:0000763,1.40e-48,108;CL:0000049,1.40e-48,108;CL:0002087,3.67e-42,115;CL:0002031,3.24e-40,120;CL:0000738,1.22e-37,136;CL:0002032,4.64e-31,161;CL:0000837,4.64e-31,161;CL:0000037,1.45e-29,168;CL:0000988,8.15e-28,177;CL:0002393,2.71e-17,9;CL:0002397,2.71e-17,9;CL:0000134,2.38e-11,354;CL:0002320,5.02e-11,361;CL:0000219,6.91e-10,386;CL:0000048,2.09e-09,427;CL:0000723,3.35e-09,433;CL:0000034,6.18e-09,441 | |||
|ontology_enrichment_development_v019=CL:0002057;3.84e-85;42!CL:0000049;8.25e-11;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.03e-55!80;UBERON:0001474!4.14e-51!86;UBERON:0002390!7.92e-51!102;UBERON:0003061!7.92e-51!102;UBERON:0002193!2.73e-45!112;UBERON:0004765!5.67e-42!101;UBERON:0001434!5.67e-42!101;UBERON:0002405!1.71e-37!115;UBERON:0002204!1.43e-22!167;UBERON:0003081!2.80e-20!216;UBERON:0002384!4.13e-12!375 | |ontology_enrichment_uberon=UBERON:0002371!1.03e-55!80;UBERON:0001474!4.14e-51!86;UBERON:0002390!7.92e-51!102;UBERON:0003061!7.92e-51!102;UBERON:0002193!2.73e-45!112;UBERON:0004765!5.67e-42!101;UBERON:0001434!5.67e-42!101;UBERON:0002405!1.71e-37!115;UBERON:0002204!1.43e-22!167;UBERON:0003081!2.80e-20!216;UBERON:0002384!4.13e-12!375 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.57e-66,76;UBERON:0001474,7.31e-61,82;UBERON:0004765,4.36e-55,90;UBERON:0002405,3.57e-53,93;UBERON:0002390,3.05e-50,98;UBERON:0003061,3.05e-50,98;UBERON:0001434,3.77e-49,100;UBERON:0002193,3.49e-45,108;UBERON:0002204,1.43e-27,167;UBERON:0003081,8.21e-22,203;UBERON:0000926,3.04e-12,315;UBERON:0004120,3.04e-12,315;UBERON:0006603,3.04e-12,315;UBERON:0002384,1.38e-10,371 | |||
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| ||
|short_description=p@chr10:23722929..23722967,+ | |short_description=p@chr10:23722929..23722967,+ | ||
}} | }} |
Latest revision as of 12:40, 23 July 2015
Short description: | p@chr10:23722929..23722967, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:23722929..23722967, + |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 6.46e-125 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.46e-125 | 42 |
defensive cell | 1.02e-108 | 48 |
phagocyte | 1.02e-108 | 48 |
monopoietic cell | 4.98e-86 | 59 |
monocyte | 4.98e-86 | 59 |
monoblast | 4.98e-86 | 59 |
promonocyte | 4.98e-86 | 59 |
macrophage dendritic cell progenitor | 4.22e-83 | 61 |
myeloid lineage restricted progenitor cell | 1.52e-76 | 66 |
granulocyte monocyte progenitor cell | 2.39e-75 | 67 |
myeloid leukocyte | 6.19e-75 | 72 |
myeloid cell | 1.40e-48 | 108 |
common myeloid progenitor | 1.40e-48 | 108 |
nongranular leukocyte | 3.67e-42 | 115 |
hematopoietic lineage restricted progenitor cell | 3.24e-40 | 120 |
leukocyte | 1.22e-37 | 136 |
hematopoietic oligopotent progenitor cell | 4.64e-31 | 161 |
hematopoietic multipotent progenitor cell | 4.64e-31 | 161 |
hematopoietic stem cell | 1.45e-29 | 168 |
hematopoietic cell | 8.15e-28 | 177 |
intermediate monocyte | 2.71e-17 | 9 |
CD14-positive, CD16-positive monocyte | 2.71e-17 | 9 |
mesenchymal cell | 2.38e-11 | 354 |
connective tissue cell | 5.02e-11 | 361 |
motile cell | 6.91e-10 | 386 |
multi fate stem cell | 2.09e-09 | 427 |
somatic stem cell | 3.35e-09 | 433 |
stem cell | 6.18e-09 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.57e-66 | 76 |
bone element | 7.31e-61 | 82 |
skeletal element | 4.36e-55 | 90 |
immune system | 3.57e-53 | 93 |
hematopoietic system | 3.05e-50 | 98 |
blood island | 3.05e-50 | 98 |
skeletal system | 3.77e-49 | 100 |
hemolymphoid system | 3.49e-45 | 108 |
musculoskeletal system | 1.43e-27 | 167 |
lateral plate mesoderm | 8.21e-22 | 203 |
mesoderm | 3.04e-12 | 315 |
mesoderm-derived structure | 3.04e-12 | 315 |
presumptive mesoderm | 3.04e-12 | 315 |
connective tissue | 1.38e-10 | 371 |