FFCP PHASE1:Hg19::chr16:77465319..77465330,-: Difference between revisions
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|id=chr16:77465319..77465330,-
|short_description=p@chr16:77465319..77465330,-
|description=CAGE_peak_at_chr16:77465319..77465330,-
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr16:77465319..77465330,- | |||
|description=CAGE_peak_at_chr16:77465319..77465330,- | |||
|id=chr16:77465319..77465330,- | |||
|ontology_enrichment_celltype=CL:0005020!4.37e-24!6;CL:0002138!4.37e-24!6;CL:0005022!4.37e-24!6;CL:0002139!2.39e-22!24;CL:0002618!4.61e-18!3;CL:0000115!6.37e-18!35;CL:0002078!1.94e-16!44;CL:0002543!8.78e-16!6;CL:0000213!3.85e-12!57;CL:0000215!3.85e-12!57;CL:0000071!7.16e-08!18;CL:0002546!7.16e-08!18 | |||
|ontology_enrichment_celltype_v019=CL:0002138;7.10e-28;6!CL:0002543;2.42e-27;6!CL:0002139;7.73e-27;24!CL:0002618;1.01e-24;3!CL:0000115;9.03e-18;36!CL:0002078;3.57e-13;45!CL:0000213;7.24e-11;58!CL:0000215;7.24e-11;58!CL:0000071;1.42e-09;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0005020,7.10e-28,6;CL:0002138,7.10e-28,6;CL:0005022,7.10e-28,6;CL:0002543,1.76e-27,6;CL:0002139,6.60e-27,24;CL:0002618,7.93e-25,3;CL:0000115,3.60e-24,36;CL:0002078,2.69e-19,45;CL:0000213,6.45e-15,58;CL:0000215,6.45e-15,58;CL:0000071,1.28e-09,18;CL:0002546,1.28e-09,18;CL:0000222,5.84e-07,121 | |||
|ontology_enrichment_development_v019=UBERON:0006215;6.59e-55;3!CL:0005022;7.10e-28;6!CL:0002546;1.42e-09;18 | |||
|ontology_enrichment_disease=DOID:6193!6.76e-07!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001473!5.09e-18!8;UBERON:0004536!5.09e-18!8;UBERON:0006558!5.09e-18!8;UBERON:0003076!1.70e-17!15;UBERON:0003057!1.70e-17!15;UBERON:0004733!1.90e-16!12;UBERON:0002028!1.90e-16!12;UBERON:0007277!1.90e-16!12;UBERON:0004732!3.85e-15!13;UBERON:0002465!2.26e-14!10;UBERON:0004111!1.07e-13!241;UBERON:0001049!2.52e-13!57;UBERON:0005068!2.52e-13!57;UBERON:0006241!2.52e-13!57;UBERON:0007135!2.52e-13!57;UBERON:0000477!1.20e-11!286;UBERON:0002066!4.84e-11!5;UBERON:0002616!8.21e-11!59;UBERON:0002680!1.36e-10!9;UBERON:0001895!1.36e-10!9;UBERON:0010092!1.36e-10!9;UBERON:0001638!1.47e-10!9;UBERON:0003920!1.47e-10!9;UBERON:0004582!1.47e-10!9;UBERON:0000055!1.38e-09!69;UBERON:0002037!1.51e-09!6;UBERON:0006215!1.51e-09!6;UBERON:0000025!4.10e-09!194;UBERON:0007023!7.52e-09!115;UBERON:0000955!8.72e-09!69;UBERON:0006238!8.72e-09!69;UBERON:0001017!2.04e-08!82;UBERON:0002049!4.43e-08!79;UBERON:0007798!4.43e-08!79;UBERON:0003075!4.85e-08!86;UBERON:0007284!4.85e-08!86;UBERON:0001896!5.61e-08!3;UBERON:0005290!5.61e-08!3;UBERON:0010096!5.61e-08!3;UBERON:0005743!6.39e-08!86;UBERON:0001986!7.16e-08!18;UBERON:0004638!7.16e-08!18;UBERON:0004852!7.16e-08!18;UBERON:0006914!1.02e-07!25;UBERON:0002346!1.40e-07!90;UBERON:0001831!5.06e-07!1;UBERON:0001567!5.06e-07!1;UBERON:0008801!5.06e-07!1;UBERON:0007029!5.37e-07!1;UBERON:0000073!5.85e-07!94;UBERON:0001016!5.85e-07!94 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;6.78e-28;6!UBERON:0001473;4.20e-21;8!UBERON:0004536;4.20e-21;8!UBERON:0006558;4.20e-21;8!UBERON:0002680;7.45e-19;9!UBERON:0001895;7.45e-19;9!UBERON:0001638;1.73e-18;9!UBERON:0003920;1.73e-18;9!UBERON:0004582;1.73e-18;9!UBERON:0002465;4.98e-17;10!UBERON:0002066;2.90e-15;5!UBERON:0004733;2.57e-14;12!UBERON:0002028;2.57e-14;12!UBERON:0004732;2.89e-13;13!UBERON:0004638;1.42e-09;18!UBERON:0001986;1.42e-09;18!UBERON:0004852;1.42e-09;18!UBERON:0010260;6.61e-09;9!UBERON:0000487;6.15e-08;22!UBERON:0006914;4.74e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,6.48e-28,6;UBERON:0006215,6.48e-28,6;UBERON:0001473,4.20e-21,8;UBERON:0004536,4.20e-21,8;UBERON:0006558,4.20e-21,8;UBERON:0002680,7.23e-19,9;UBERON:0001895,7.23e-19,9;UBERON:0010092,7.23e-19,9;UBERON:0001638,1.41e-18,9;UBERON:0003920,1.41e-18,9;UBERON:0004582,1.41e-18,9;UBERON:0002465,4.98e-17,10;UBERON:0002066,2.51e-15,5;UBERON:0004733,2.51e-14,12;UBERON:0002028,2.51e-14,12;UBERON:0007277,2.51e-14,12;UBERON:0004732,2.83e-13,13;UBERON:0003076,1.37e-11,15;UBERON:0003057,1.37e-11,15;UBERON:0004638,1.28e-09,18;UBERON:0001986,1.28e-09,18;UBERON:0004852,1.28e-09,18;UBERON:0000055,1.94e-09,68;UBERON:0010260,6.11e-09,9;UBERON:0002049,3.34e-08,78;UBERON:0007798,3.34e-08,78;UBERON:0000487,5.66e-08,22;UBERON:0006914,4.41e-07,25;UBERON:0004111,8.17e-07,240 | |||
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|short_description=p@chr16:77465319..77465330,- | |||
}} | }} |
Latest revision as of 12:30, 25 July 2015
Short description: | p@chr16:77465319..77465330, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:77465319..77465330, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphangioblast | 7.10e-28 | 6 |
endothelial cell of lymphatic vessel | 7.10e-28 | 6 |
vascular lymphangioblast | 7.10e-28 | 6 |
vein endothelial cell | 1.76e-27 | 6 |
endothelial cell of vascular tree | 6.60e-27 | 24 |
endothelial cell of umbilical vein | 7.93e-25 | 3 |
endothelial cell | 3.60e-24 | 36 |
meso-epithelial cell | 2.69e-19 | 45 |
lining cell | 6.45e-15 | 58 |
barrier cell | 6.45e-15 | 58 |
blood vessel endothelial cell | 1.28e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.28e-09 | 18 |
mesodermal cell | 5.84e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 6.48e-28 | 6 |
rhombic lip | 6.48e-28 | 6 |
lymphatic vessel | 4.20e-21 | 8 |
lymph vasculature | 4.20e-21 | 8 |
lymphatic part of lymphoid system | 4.20e-21 | 8 |
regional part of metencephalon | 7.23e-19 | 9 |
metencephalon | 7.23e-19 | 9 |
future metencephalon | 7.23e-19 | 9 |
vein | 1.41e-18 | 9 |
venous blood vessel | 1.41e-18 | 9 |
venous system | 1.41e-18 | 9 |
lymphoid system | 4.98e-17 | 10 |
umbilical vein | 2.51e-15 | 5 |
segmental subdivision of hindbrain | 2.51e-14 | 12 |
hindbrain | 2.51e-14 | 12 |
presumptive hindbrain | 2.51e-14 | 12 |
segmental subdivision of nervous system | 2.83e-13 | 13 |
posterior neural tube | 1.37e-11 | 15 |
chordal neural plate | 1.37e-11 | 15 |
blood vessel endothelium | 1.28e-09 | 18 |
endothelium | 1.28e-09 | 18 |
cardiovascular system endothelium | 1.28e-09 | 18 |
vessel | 1.94e-09 | 68 |
umbilical blood vessel | 6.11e-09 | 9 |
vasculature | 3.34e-08 | 78 |
vascular system | 3.34e-08 | 78 |
simple squamous epithelium | 5.66e-08 | 22 |
squamous epithelium | 4.41e-07 | 25 |
anatomical conduit | 8.17e-07 | 240 |