FFCP PHASE1:Hg19::chr10:63702891..63702920,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:63702891..63702920,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr10:63702891..63702920,+ | |description=CAGE_peak_at_chr10:63702891..63702920,+ | ||
|id=chr10:63702891..63702920,+ | |id=chr10:63702891..63702920,+ | ||
|ontology_enrichment_celltype=CL:0002057!1.81e-62!42;CL:0000860!1.60e-57!45;CL:0000766!4.95e-41!76;CL:0002194!2.98e-39!63;CL:0000576!2.98e-39!63;CL:0000040!2.98e-39!63;CL:0000559!2.98e-39!63;CL:0002009!1.04e-37!65;CL:0000839!3.96e-36!70;CL:0000557!1.84e-35!71;CL:0000738!1.94e-30!140;CL:0002087!1.39e-28!119;CL:0000763!6.76e-24!112;CL:0000049!6.76e-24!112;CL:0002031!8.11e-24!124;CL:0000037!5.16e-22!172;CL:0000566!5.16e-22!172;CL:0000988!4.78e-21!182;CL:0002032!6.23e-19!165;CL:0000837!6.23e-19!165;CL:0002393!3.08e-15!9;CL:0002397!3.08e-15!9;CL:0000134!2.40e-12!358;CL:0002320!8.89e-12!365;CL:0000048!4.65e-10!430;CL:0000219!8.60e-10!390;CL:0000034!8.92e-10!444;CL:0000723!1.13e-09!436;CL:0000767!1.72e-07!3;CL:0000842!1.72e-07!3 | |ontology_enrichment_celltype=CL:0002057!1.81e-62!42;CL:0000860!1.60e-57!45;CL:0000766!4.95e-41!76;CL:0002194!2.98e-39!63;CL:0000576!2.98e-39!63;CL:0000040!2.98e-39!63;CL:0000559!2.98e-39!63;CL:0002009!1.04e-37!65;CL:0000839!3.96e-36!70;CL:0000557!1.84e-35!71;CL:0000738!1.94e-30!140;CL:0002087!1.39e-28!119;CL:0000763!6.76e-24!112;CL:0000049!6.76e-24!112;CL:0002031!8.11e-24!124;CL:0000037!5.16e-22!172;CL:0000566!5.16e-22!172;CL:0000988!4.78e-21!182;CL:0002032!6.23e-19!165;CL:0000837!6.23e-19!165;CL:0002393!3.08e-15!9;CL:0002397!3.08e-15!9;CL:0000134!2.40e-12!358;CL:0002320!8.89e-12!365;CL:0000048!4.65e-10!430;CL:0000219!8.60e-10!390;CL:0000034!8.92e-10!444;CL:0000723!1.13e-09!436;CL:0000767!1.72e-07!3;CL:0000842!1.72e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.27e-59;33!CL:0002057;1.27e-59;33!CL:0000473;1.27e-41;39!CL:0000234;1.27e-41;39!CL:0000576;4.05e-37;48!CL:0000766;3.37e-26;69!CL:0002393;7.28e-16;6!CL:0002397;7.28e-16;6!CL:0002087;1.18e-13;104!CL:0000763;4.19e-12;100!CL:0000226;2.45e-08;3!CL:0000842;2.45e-08;3!CL:0000767;3.07e-08;3!CL:0000738;3.83e-08;136!CL:0002581;8.67e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.40e-75,42;CL:0002057,2.40e-75,42;CL:0000473,2.60e-65,48;CL:0000234,2.60e-65,48;CL:0000766,1.36e-52,72;CL:0002194,2.95e-51,59;CL:0000576,2.95e-51,59;CL:0000040,2.95e-51,59;CL:0000559,2.95e-51,59;CL:0002009,1.92e-49,61;CL:0000839,2.22e-45,66;CL:0000557,1.22e-44,67;CL:0000763,1.94e-33,108;CL:0000049,1.94e-33,108;CL:0000738,6.08e-30,136;CL:0002087,9.72e-29,115;CL:0000037,3.41e-23,168;CL:0002031,7.00e-23,120;CL:0000988,9.87e-22,177;CL:0002032,1.04e-20,161;CL:0000837,1.04e-20,161;CL:0000134,9.19e-13,354;CL:0002320,2.14e-12,361;CL:0000219,4.25e-11,386;CL:0002393,1.24e-10,9;CL:0002397,1.24e-10,9;CL:0000034,6.61e-10,441;CL:0000048,1.65e-09,427;CL:0000723,2.74e-09,433;CL:0000226,2.03e-08,3;CL:0000842,2.03e-08,3;CL:0000767,3.84e-08,3;CL:0002581,8.18e-07,1 | |||
|ontology_enrichment_development_v019=CL:0002057;6.12e-53;42!CL:0000049;3.53e-09;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.48e-30!102;UBERON:0003061!2.48e-30!102;UBERON:0002371!3.24e-30!80;UBERON:0002193!2.37e-29!112;UBERON:0001474!2.49e-27!86;UBERON:0004765!5.47e-23!101;UBERON:0001434!5.47e-23!101;UBERON:0002405!3.98e-21!115;UBERON:0002204!7.50e-13!167;UBERON:0003081!5.35e-12!216;UBERON:0002384!5.26e-11!375 | |ontology_enrichment_uberon=UBERON:0002390!2.48e-30!102;UBERON:0003061!2.48e-30!102;UBERON:0002371!3.24e-30!80;UBERON:0002193!2.37e-29!112;UBERON:0001474!2.49e-27!86;UBERON:0004765!5.47e-23!101;UBERON:0001434!5.47e-23!101;UBERON:0002405!3.98e-21!115;UBERON:0002204!7.50e-13!167;UBERON:0003081!5.35e-12!216;UBERON:0002384!5.26e-11!375 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.75e-39,76;UBERON:0001474,1.15e-35,82;UBERON:0002390,1.38e-34,98;UBERON:0003061,1.38e-34,98;UBERON:0004765,4.34e-32,90;UBERON:0002193,6.31e-31,108;UBERON:0002405,6.64e-31,93;UBERON:0001434,2.06e-28,100;UBERON:0002204,4.59e-15,167;UBERON:0003081,5.02e-14,203;UBERON:0002384,6.81e-12,371;UBERON:0000926,3.73e-07,315;UBERON:0004120,3.73e-07,315;UBERON:0006603,3.73e-07,315 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18009283054671,1.15148819429164,0.928896739896456,0,0,0,0,0,0,14.4038806218288,4.8130667392834,4.34021741431704,0,0,0,0.145398238779565,0,0.242584061187816,1.16214518452842,0.822335776043652,2.16794459626573,5.17846306179871,4.61089271752381,10.8781825748749,15.1688099524112,12.2642089880927,4.06279459783025,0.376484679085209,0,1.34834090667051,24.4867113896722,19.5766706516417,26.2128221577607,0,0,0.426224750532694,16.2517173632007,7.37600792098482,10.5879782329248,1.50749199154046,3.12889751052121,0.868755378820466,6.65939452896706,22.0966581592539,29.7474644194431,0.422510572623884,4.25208599930087,0.838634582033504,0.112328631146495,0,0.16072558669708,0.855038231223746,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0.764546456250458,0,3.92355994087075,0,0,0,0,0,0,0.473447805734733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57656445851882,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0.215627574859517,0.128343036279748,0,0,0,0,0,0,0,1.24324654030811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,2.37285620900479,1.921096040462,0,0,0,0,0,0,0.128139149255701,0,0,1.48418066444991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0.616067160352178,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551365343546124,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0.379473173765715,0,0,0,0,0.0941438007767792,0,0,0.443430153536676,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0.10893846351899,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0.471612915298998,0,0,0,0,0,0.544017803369474,2.2562090462043,1.53172788381731,3.27872630709804,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345430341731199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462175628631418,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0,0.23806443146374,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18009283054671,1.15148819429164,0.928896739896456,0,0,0,0,0,0,14.4038806218288,4.8130667392834,4.34021741431704,0,0,0,0.145398238779565,0,0.242584061187816,1.16214518452842,0.822335776043652,2.16794459626573,5.17846306179871,4.61089271752381,10.8781825748749,15.1688099524112,12.2642089880927,4.06279459783025,0.376484679085209,0,1.34834090667051,24.4867113896722,19.5766706516417,26.2128221577607,0,0,0.426224750532694,16.2517173632007,7.37600792098482,10.5879782329248,1.50749199154046,3.12889751052121,0.868755378820466,6.65939452896706,22.0966581592539,29.7474644194431,0.422510572623884,4.25208599930087,0.838634582033504,0.112328631146495,0,0.16072558669708,0.855038231223746,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0.764546456250458,0,3.92355994087075,0,0,0,0,0,0,0.473447805734733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57656445851882,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0.215627574859517,0.128343036279748,0,0,0,0,0,0,0,1.24324654030811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,2.37285620900479,1.921096040462,0,0,0,0,0,0,0.128139149255701,0,0,1.48418066444991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0.616067160352178,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551365343546124,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0.379473173765715,0,0,0,0,0.0941438007767792,0,0,0.443430153536676,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0.10893846351899,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0.471612915298998,0,0,0,0,0,0.544017803369474,2.2562090462043,1.53172788381731,3.27872630709804,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345430341731199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462175628631418,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0,0.23806443146374,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p@chr10:63702891..63702920,+ | |short_description=p@chr10:63702891..63702920,+ | ||
}} | }} |
Latest revision as of 14:35, 23 July 2015
Short description: | p@chr10:63702891..63702920, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:63702891..63702920, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.75e-39 | 76 |
bone element | 1.15e-35 | 82 |
hematopoietic system | 1.38e-34 | 98 |
blood island | 1.38e-34 | 98 |
skeletal element | 4.34e-32 | 90 |
hemolymphoid system | 6.31e-31 | 108 |
immune system | 6.64e-31 | 93 |
skeletal system | 2.06e-28 | 100 |
musculoskeletal system | 4.59e-15 | 167 |
lateral plate mesoderm | 5.02e-14 | 203 |
connective tissue | 6.81e-12 | 371 |
mesoderm | 3.73e-07 | 315 |
mesoderm-derived structure | 3.73e-07 | 315 |
presumptive mesoderm | 3.73e-07 | 315 |