FFCP PHASE1:Hg19::chr8:38260028..38260044,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:38260028..38260044,+ | |||
|description=CAGE_peak_at_chr8:38260028..38260044,+ | |description=CAGE_peak_at_chr8:38260028..38260044,+ | ||
|id=chr8:38260028..38260044,+ | |id=chr8:38260028..38260044,+ | ||
|ontology_enrichment_celltype=CL:0002319!3.71e-20!25;CL:0002605!3.46e-16!3;CL:0002586!1.46e-15!3;CL:0000047!1.63e-15!8;CL:0000149!8.54e-12!4;CL:0000243!5.20e-10!15;CL:0000125!5.20e-10!15;CL:0000030!5.20e-10!15;CL:0000339!5.20e-10!15;CL:0000133!3.41e-09!59;CL:0000095!6.88e-09!17;CL:0000123!6.88e-09!17;CL:0000221!1.35e-08!71;CL:0000540!3.84e-08!6;CL:0000031!3.84e-08!6;CL:0000404!3.84e-08!6;CL:0000128!3.55e-07!7;CL:0000126!3.55e-07!7;CL:0000127!3.55e-07!7;CL:0002453!3.55e-07!7 | |ontology_enrichment_celltype=CL:0002319!3.71e-20!25;CL:0002605!3.46e-16!3;CL:0002586!1.46e-15!3;CL:0000047!1.63e-15!8;CL:0000149!8.54e-12!4;CL:0000243!5.20e-10!15;CL:0000125!5.20e-10!15;CL:0000030!5.20e-10!15;CL:0000339!5.20e-10!15;CL:0000133!3.41e-09!59;CL:0000095!6.88e-09!17;CL:0000123!6.88e-09!17;CL:0000221!1.35e-08!71;CL:0000540!3.84e-08!6;CL:0000031!3.84e-08!6;CL:0000404!3.84e-08!6;CL:0000128!3.55e-07!7;CL:0000126!3.55e-07!7;CL:0000127!3.55e-07!7;CL:0002453!3.55e-07!7 | ||
|ontology_enrichment_celltype_v019=CL:0002605;2.87e-50;3!CL:0000128;5.11e-22;7!CL:0000126;5.11e-22;7!CL:0000127;5.11e-22;7!CL:0002319;6.95e-22;25!CL:0000313;2.66e-18;1!CL:0000540;5.68e-12;6!CL:0000404;5.68e-12;6!CL:0000159;7.98e-10;2!CL:0000047;1.33e-09;2!CL:0000243;1.90e-09;15!CL:0000125;1.90e-09;15!CL:0000095;1.64e-08;17!CL:0002586;9.91e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,3.70e-50,3;CL:0000128,5.69e-22,7;CL:0000126,5.69e-22,7;CL:0000127,5.69e-22,7;CL:0002453,5.69e-22,7;CL:0002319,7.34e-22,25;CL:0000047,3.50e-19,8;CL:0000313,2.66e-18,1;CL:0000540,5.68e-12,6;CL:0000031,5.68e-12,6;CL:0000404,5.68e-12,6;CL:0000159,7.98e-10,2;CL:0000133,1.37e-09,59;CL:0000243,1.98e-09,15;CL:0000125,1.98e-09,15;CL:0000030,1.98e-09,15;CL:0000339,1.98e-09,15;CL:0000095,1.70e-08,17;CL:0000123,1.70e-08,17;CL:0000221,7.30e-08,72;CL:0002586,9.12e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000031;5.68e-12;6!CL:0000339;1.90e-09;15!CL:0000133;1.21e-08;59 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:2152;2.66e-18;1!DOID:3371;4.83e-18;1!DOID:4549;4.83e-18;1!DOID:5861;4.83e-18;1!DOID:6496;4.83e-18;1!DOID:6193;7.37e-18;1!DOID:3350;1.33e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,2.66e-18,1;DOID:3371,4.44e-18,1;DOID:4549,4.44e-18,1;DOID:5861,4.44e-18,1;DOID:6496,4.44e-18,1;DOID:6193,6.23e-18,1;DOID:3350,1.22e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0005743!8.29e-16!86;UBERON:0001781!1.46e-15!3;UBERON:0001782!1.46e-15!3;UBERON:0005424!1.46e-15!3;UBERON:0000073!6.14e-14!94;UBERON:0001016!6.14e-14!94;UBERON:0001017!2.18e-11!82;UBERON:0007625!6.81e-11!11;UBERON:0004121!1.00e-09!169;UBERON:0000966!1.59e-09!5;UBERON:0005388!1.59e-09!5;UBERON:0001802!1.59e-09!5;UBERON:0000924!2.18e-09!173;UBERON:0006601!2.18e-09!173;UBERON:0000033!1.79e-08!123;UBERON:0000153!6.53e-08!129;UBERON:0007811!6.53e-08!129;UBERON:0001896!1.39e-07!3;UBERON:0005290!1.39e-07!3;UBERON:0010096!1.39e-07!3 | |ontology_enrichment_uberon=UBERON:0005743!8.29e-16!86;UBERON:0001781!1.46e-15!3;UBERON:0001782!1.46e-15!3;UBERON:0005424!1.46e-15!3;UBERON:0000073!6.14e-14!94;UBERON:0001016!6.14e-14!94;UBERON:0001017!2.18e-11!82;UBERON:0007625!6.81e-11!11;UBERON:0004121!1.00e-09!169;UBERON:0000966!1.59e-09!5;UBERON:0005388!1.59e-09!5;UBERON:0001802!1.59e-09!5;UBERON:0000924!2.18e-09!173;UBERON:0006601!2.18e-09!173;UBERON:0000033!1.79e-08!123;UBERON:0000153!6.53e-08!129;UBERON:0007811!6.53e-08!129;UBERON:0001896!1.39e-07!3;UBERON:0005290!1.39e-07!3;UBERON:0010096!1.39e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0004911;2.66e-18;1!UBERON:0004909;7.98e-10;2!UBERON:0002418;7.08e-07;3!UBERON:0004755;7.08e-07;3!UBERON:0001896;9.91e-07;3!UBERON:0001781;9.91e-07;3!UBERON:0001782;9.91e-07;3!UBERON:0005290;9.91e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004911,2.66e-18,1;UBERON:0004909,7.98e-10,2;UBERON:0001017,2.33e-09,81;UBERON:0001016,2.12e-08,89;UBERON:0002418,6.88e-07,3;UBERON:0004755,6.88e-07,3;UBERON:0001782,9.12e-07,3;UBERON:0005424,9.12e-07,3 | |||
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|short_description=p@chr8:38260028..38260044,+ | |short_description=p@chr8:38260028..38260044,+ | ||
}} | }} |
Latest revision as of 18:11, 31 July 2015
Short description: | p@chr8:38260028..38260044, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:38260028..38260044, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 3.70e-50 | 3 |
oligodendrocyte | 5.69e-22 | 7 |
macroglial cell | 5.69e-22 | 7 |
astrocyte | 5.69e-22 | 7 |
oligodendrocyte precursor cell | 5.69e-22 | 7 |
neural cell | 7.34e-22 | 25 |
neuronal stem cell | 3.50e-19 | 8 |
serous secreting cell | 2.66e-18 | 1 |
neuron | 5.68e-12 | 6 |
neuroblast | 5.68e-12 | 6 |
electrically signaling cell | 5.68e-12 | 6 |
seromucus secreting cell | 7.98e-10 | 2 |
neurectodermal cell | 1.37e-09 | 59 |
glial cell (sensu Vertebrata) | 1.98e-09 | 15 |
glial cell | 1.98e-09 | 15 |
glioblast | 1.98e-09 | 15 |
glioblast (sensu Vertebrata) | 1.98e-09 | 15 |
neuron associated cell | 1.70e-08 | 17 |
neuron associated cell (sensu Vertebrata) | 1.70e-08 | 17 |
ectodermal cell | 7.30e-08 | 72 |
retinal pigment epithelial cell | 9.12e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
epithelium of female gonad | 2.66e-18 | 1 |
epithelium of gonad | 7.98e-10 | 2 |
central nervous system | 2.33e-09 | 81 |
nervous system | 2.12e-08 | 89 |
cartilage tissue | 6.88e-07 | 3 |
skeletal tissue | 6.88e-07 | 3 |
pigmented layer of retina | 9.12e-07 | 3 |
presumptive retinal pigmented epithelium | 9.12e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 2.66e-18 | 1 |
chondrosarcoma | 4.44e-18 | 1 |
extraosseous chondrosarcoma | 4.44e-18 | 1 |
myxoid chondrosarcoma | 4.44e-18 | 1 |
extraskeletal myxoid chondrosarcoma | 4.44e-18 | 1 |
epithelioid sarcoma | 6.23e-18 | 1 |
mesenchymal cell neoplasm | 1.22e-09 | 2 |