FFCP PHASE1:Hg19::chr11:62380709..62380748,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6094 | |EntrezGene=6094 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10254 | |HGNC=10254 | ||
|TSSclassifier=strong | |||
|UniProt=E9PMR7 | |UniProt=E9PMR7 | ||
|association_with_transcript=-252bp_to_ENST00000525947_5end | |association_with_transcript=-252bp_to_ENST00000525947_5end | ||
|cluster_id=chr11:62380709..62380748,+ | |||
|coexpression_cluster_id=C40 | |||
|description=CAGE_peak_2_at_ROM1_5end | |description=CAGE_peak_2_at_ROM1_5end | ||
|id=chr11:62380709..62380748,+ | |id=chr11:62380709..62380748,+ | ||
|ontology_enrichment_celltype=CL:0002139!4.80e-11!24;CL:0000115!2.56e-10!35;CL:0000071!6.31e-10!18;CL:0002546!6.31e-10!18;CL:0002078!3.24e-08!44;CL:1000413!3.39e-07!9 | |ontology_enrichment_celltype=CL:0002139!4.80e-11!24;CL:0000115!2.56e-10!35;CL:0000071!6.31e-10!18;CL:0002546!6.31e-10!18;CL:0002078!3.24e-08!44;CL:1000413!3.39e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000138;3.20e-14;6!CL:0002561;4.18e-12;2!CL:0002602;6.13e-12;2!CL:0000153;1.59e-09;9!CL:0000447;1.59e-09;9!CL:0002564;4.09e-08;3!CL:0000135;8.87e-08;3!CL:0000388;8.87e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000058,2.79e-14,6;CL:0000138,2.79e-14,6;CL:0002561,4.43e-12,2;CL:0002602,6.15e-12,2;CL:0000153,1.46e-09,9;CL:0000447,1.46e-09,9;CL:0002564,3.55e-08,3;CL:0000135,5.64e-08,3;CL:0000388,5.64e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0003056;3.42e-08;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003075!5.71e-19!86;UBERON:0007284!5.71e-19!86;UBERON:0001049!4.28e-18!57;UBERON:0005068!4.28e-18!57;UBERON:0006241!4.28e-18!57;UBERON:0007135!4.28e-18!57;UBERON:0002346!2.78e-17!90;UBERON:0005743!6.24e-17!86;UBERON:0000477!1.19e-15!286;UBERON:0000483!1.96e-15!309;UBERON:0004111!2.45e-15!241;UBERON:0000119!2.47e-15!312;UBERON:0001017!2.95e-15!82;UBERON:0000025!6.38e-15!194;UBERON:0003056!1.17e-14!61;UBERON:0002616!1.29e-14!59;UBERON:0002780!1.85e-14!41;UBERON:0001890!1.85e-14!41;UBERON:0006240!1.85e-14!41;UBERON:0000955!4.35e-14!69;UBERON:0006238!4.35e-14!69;UBERON:0003080!7.29e-14!42;UBERON:0000073!1.11e-13!94;UBERON:0001016!1.11e-13!94;UBERON:0000033!1.94e-13!123;UBERON:0007023!4.36e-13!115;UBERON:0002020!4.25e-12!34;UBERON:0003528!4.25e-12!34;UBERON:0000153!6.40e-12!129;UBERON:0007811!6.40e-12!129;UBERON:0001893!6.57e-12!34;UBERON:0000467!1.01e-11!625;UBERON:0000480!1.30e-11!626;UBERON:0000468!1.80e-11!659;UBERON:0002791!1.81e-11!33;UBERON:0000475!5.90e-11!365;UBERON:0004121!7.77e-11!169;UBERON:0001869!9.39e-11!32;UBERON:0000924!4.18e-10!173;UBERON:0006601!4.18e-10!173;UBERON:0000481!4.56e-10!347;UBERON:0001986!6.31e-10!18;UBERON:0004638!6.31e-10!18;UBERON:0004852!6.31e-10!18;UBERON:0000923!6.71e-09!604;UBERON:0005291!6.71e-09!604;UBERON:0006598!6.71e-09!604;UBERON:0002532!6.71e-09!604;UBERON:0002050!8.41e-09!605;UBERON:0005423!8.41e-09!605;UBERON:0000922!1.26e-08!612;UBERON:0002308!1.05e-07!9;UBERON:0000125!1.05e-07!9;UBERON:0002420!1.62e-07!9;UBERON:0007245!1.62e-07!9;UBERON:0010009!1.62e-07!9;UBERON:0010011!1.62e-07!9;UBERON:0000454!1.62e-07!9;UBERON:0002619!2.14e-07!22;UBERON:0000487!3.26e-07!22;UBERON:0003915!3.39e-07!9;UBERON:0004700!3.39e-07!9;UBERON:0001917!3.39e-07!9;UBERON:0006914!7.34e-07!25;UBERON:0000956!8.01e-07!25;UBERON:0000203!8.01e-07!25;UBERON:0004872!9.34e-07!84 | |ontology_enrichment_uberon=UBERON:0003075!5.71e-19!86;UBERON:0007284!5.71e-19!86;UBERON:0001049!4.28e-18!57;UBERON:0005068!4.28e-18!57;UBERON:0006241!4.28e-18!57;UBERON:0007135!4.28e-18!57;UBERON:0002346!2.78e-17!90;UBERON:0005743!6.24e-17!86;UBERON:0000477!1.19e-15!286;UBERON:0000483!1.96e-15!309;UBERON:0004111!2.45e-15!241;UBERON:0000119!2.47e-15!312;UBERON:0001017!2.95e-15!82;UBERON:0000025!6.38e-15!194;UBERON:0003056!1.17e-14!61;UBERON:0002616!1.29e-14!59;UBERON:0002780!1.85e-14!41;UBERON:0001890!1.85e-14!41;UBERON:0006240!1.85e-14!41;UBERON:0000955!4.35e-14!69;UBERON:0006238!4.35e-14!69;UBERON:0003080!7.29e-14!42;UBERON:0000073!1.11e-13!94;UBERON:0001016!1.11e-13!94;UBERON:0000033!1.94e-13!123;UBERON:0007023!4.36e-13!115;UBERON:0002020!4.25e-12!34;UBERON:0003528!4.25e-12!34;UBERON:0000153!6.40e-12!129;UBERON:0007811!6.40e-12!129;UBERON:0001893!6.57e-12!34;UBERON:0000467!1.01e-11!625;UBERON:0000480!1.30e-11!626;UBERON:0000468!1.80e-11!659;UBERON:0002791!1.81e-11!33;UBERON:0000475!5.90e-11!365;UBERON:0004121!7.77e-11!169;UBERON:0001869!9.39e-11!32;UBERON:0000924!4.18e-10!173;UBERON:0006601!4.18e-10!173;UBERON:0000481!4.56e-10!347;UBERON:0001986!6.31e-10!18;UBERON:0004638!6.31e-10!18;UBERON:0004852!6.31e-10!18;UBERON:0000923!6.71e-09!604;UBERON:0005291!6.71e-09!604;UBERON:0006598!6.71e-09!604;UBERON:0002532!6.71e-09!604;UBERON:0002050!8.41e-09!605;UBERON:0005423!8.41e-09!605;UBERON:0000922!1.26e-08!612;UBERON:0002308!1.05e-07!9;UBERON:0000125!1.05e-07!9;UBERON:0002420!1.62e-07!9;UBERON:0007245!1.62e-07!9;UBERON:0010009!1.62e-07!9;UBERON:0010011!1.62e-07!9;UBERON:0000454!1.62e-07!9;UBERON:0002619!2.14e-07!22;UBERON:0000487!3.26e-07!22;UBERON:0003915!3.39e-07!9;UBERON:0004700!3.39e-07!9;UBERON:0001917!3.39e-07!9;UBERON:0006914!7.34e-07!25;UBERON:0000956!8.01e-07!25;UBERON:0000203!8.01e-07!25;UBERON:0004872!9.34e-07!84 | ||
|ontology_enrichment_uberon_v019=UBERON:0011135;1.40e-17;5!UBERON:0002216;1.40e-17;5!UBERON:0011134;1.40e-17;5!UBERON:0002209;1.40e-17;5!UBERON:0002213;1.40e-17;5!UBERON:0007844;1.40e-17;5!UBERON:0011138;1.40e-17;5!UBERON:0001130;1.40e-17;5!UBERON:0001066;1.40e-17;5!UBERON:0001468;1.40e-17;5!UBERON:0002784;2.82e-13;4!UBERON:0001905;1.93e-12;2!UBERON:0002757;1.93e-12;2!UBERON:0010134;1.93e-12;2!UBERON:0005408;1.93e-12;2!UBERON:0001899;1.93e-12;2!UBERON:0005933;4.18e-12;2!UBERON:0005942;4.18e-12;2!UBERON:0005932;4.18e-12;2!UBERON:0006444;6.13e-12;2!UBERON:0001995;6.13e-12;2!UBERON:0004715;6.13e-12;2!UBERON:0004905;4.88e-11;8!UBERON:0000982;4.88e-11;8!UBERON:0004770;4.88e-11;8!UBERON:0000966;2.23e-10;5!UBERON:0005388;2.23e-10;5!UBERON:0001802;2.23e-10;5!UBERON:0000970;2.39e-09;20!UBERON:0002104;7.13e-09;21!UBERON:0002418;3.07e-08;3!UBERON:0004755;3.07e-08;3!UBERON:0002242;4.09e-08;3!UBERON:0000020;4.77e-08;23!UBERON:0007846;8.87e-08;3!UBERON:0000043;8.87e-08;3!UBERON:0007845;8.87e-08;3!UBERON:0001894;9.03e-08;7!UBERON:0001032;1.10e-07;24!UBERON:0004456;1.10e-07;24!UBERON:0000019;5.90e-07;19!UBERON:0000047;5.90e-07;19!UBERON:0004088;5.90e-07;19!UBERON:0010230;5.90e-07;19!UBERON:0004765;8.16e-07;26 | |||
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|short_description=p2@ROM1 | |short_description=p2@ROM1 | ||
}} | }} |
Latest revision as of 20:16, 18 September 2015
Short description: | p2@ROM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ROM1_5end |
Coexpression cluster: | C40_eye_retina_Lens_pineal_tongue_retinoblastoma_small |
Association with transcript: | -252bp_to_ENST00000525947_5end |
EntrezGene: | ROM1 |
HGNC: | 10254 |
UniProt: | E9PMR7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondroblast | 2.79e-14 | 6 |
chondrocyte | 2.79e-14 | 6 |
outer root sheath cell | 4.43e-12 | 2 |
annulus pulposus cell | 6.15e-12 | 2 |
GAG secreting cell | 1.46e-09 | 9 |
carbohydrate secreting cell | 1.46e-09 | 9 |
nucleus pulposus cell of intervertebral disc | 3.55e-08 | 3 |
fibrocyte | 5.64e-08 | 3 |
tendon cell | 5.64e-08 | 3 |