FFCP PHASE1:Hg19::chr12:69327112..69327126,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:69327112..69327126,+ | |||
|coexpression_cluster_id=C2235 | |||
|description=CAGE_peak_at_chr12:69327112..69327126,+ | |description=CAGE_peak_at_chr12:69327112..69327126,+ | ||
|id=chr12:69327112..69327126,+ | |id=chr12:69327112..69327126,+ | ||
|ontology_enrichment_celltype=CL:0000839!6.74e-36!70;CL:0000557!4.04e-35!71;CL:0000766!7.32e-35!76;CL:0002057!1.29e-33!42;CL:0002194!1.61e-32!63;CL:0000576!1.61e-32!63;CL:0000040!1.61e-32!63;CL:0000559!1.61e-32!63;CL:0000860!7.30e-32!45;CL:0002009!5.50e-31!65;CL:0000763!3.68e-21!112;CL:0000049!3.68e-21!112;CL:0002031!2.50e-15!124;CL:0000738!1.84e-14!140;CL:0002087!4.22e-13!119;CL:0002032!9.33e-11!165;CL:0000837!9.33e-11!165;CL:0000037!3.53e-10!172;CL:0000566!3.53e-10!172;CL:0000988!3.74e-09!182;CL:0002274!9.21e-07!5;CL:0000457!9.21e-07!5;CL:0002191!9.21e-07!5;CL:0000097!9.21e-07!5;CL:0000831!9.21e-07!5;CL:0002028!9.21e-07!5 | |ontology_enrichment_celltype=CL:0000839!6.74e-36!70;CL:0000557!4.04e-35!71;CL:0000766!7.32e-35!76;CL:0002057!1.29e-33!42;CL:0002194!1.61e-32!63;CL:0000576!1.61e-32!63;CL:0000040!1.61e-32!63;CL:0000559!1.61e-32!63;CL:0000860!7.30e-32!45;CL:0002009!5.50e-31!65;CL:0000763!3.68e-21!112;CL:0000049!3.68e-21!112;CL:0002031!2.50e-15!124;CL:0000738!1.84e-14!140;CL:0002087!4.22e-13!119;CL:0002032!9.33e-11!165;CL:0000837!9.33e-11!165;CL:0000037!3.53e-10!172;CL:0000566!3.53e-10!172;CL:0000988!3.74e-09!182;CL:0002274!9.21e-07!5;CL:0000457!9.21e-07!5;CL:0002191!9.21e-07!5;CL:0000097!9.21e-07!5;CL:0000831!9.21e-07!5;CL:0002028!9.21e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000860;8.45e-52;33!CL:0002057;8.45e-52;33!CL:0000473;8.53e-38;39!CL:0000234;8.53e-38;39!CL:0000576;6.79e-36;48!CL:0000766;5.32e-20;69!CL:0002619;2.01e-14;3!CL:0000763;5.44e-12;100!CL:0000097;1.43e-09;5!CL:0002087;5.11e-09;104!CL:0000136;1.56e-08;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.35e-48,42;CL:0002057,1.35e-48,42;CL:0000839,1.59e-48,66;CL:0000557,1.03e-47,67;CL:0000766,1.49e-47,72;CL:0002194,1.09e-42,59;CL:0000576,1.09e-42,59;CL:0000040,1.09e-42,59;CL:0000559,1.09e-42,59;CL:0000473,7.30e-42,48;CL:0000234,7.30e-42,48;CL:0002009,4.02e-41,61;CL:0000763,6.75e-32,108;CL:0000049,6.75e-32,108;CL:0002031,5.68e-24,120;CL:0000738,3.19e-22,136;CL:0002087,3.02e-19,115;CL:0002032,3.14e-19,161;CL:0000837,3.14e-19,161;CL:0000037,3.76e-18,168;CL:0000988,6.85e-17,177;CL:0002619,1.76e-14,3;CL:0000134,3.16e-10,354;CL:0002320,7.07e-10,361;CL:0000097,1.45e-09,5;CL:0002028,1.45e-09,5;CL:0000219,1.21e-08,386;CL:0000136,1.95e-07,15;CL:0000048,3.85e-07,427;CL:0000723,6.20e-07,433 | |||
|ontology_enrichment_development_v019=CL:0002057;3.52e-33;42!CL:0000049;1.27e-07;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!5.03e-29!80;UBERON:0001474!1.07e-25!86;UBERON:0002390!3.08e-25!102;UBERON:0003061!3.08e-25!102;UBERON:0002405!3.91e-24!115;UBERON:0002193!5.13e-24!112;UBERON:0004765!9.45e-23!101;UBERON:0001434!9.45e-23!101;UBERON:0002204!5.98e-09!167;UBERON:0000062!1.18e-07!511 | |ontology_enrichment_uberon=UBERON:0002371!5.03e-29!80;UBERON:0001474!1.07e-25!86;UBERON:0002390!3.08e-25!102;UBERON:0003061!3.08e-25!102;UBERON:0002405!3.91e-24!115;UBERON:0002193!5.13e-24!112;UBERON:0004765!9.45e-23!101;UBERON:0001434!9.45e-23!101;UBERON:0002204!5.98e-09!167;UBERON:0000062!1.18e-07!511 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.22e-41,76;UBERON:0001474,6.43e-38,82;UBERON:0004765,5.16e-34,90;UBERON:0002390,3.93e-33,98;UBERON:0003061,3.93e-33,98;UBERON:0002405,1.01e-32,93;UBERON:0001434,5.29e-30,100;UBERON:0002193,1.76e-29,108;UBERON:0002204,1.82e-15,167;UBERON:0003081,1.12e-12,203;UBERON:0002384,3.33e-10,371 | |||
|phase1_expression=0.363356758541113,1.07050261945492,0.140954404095971,0,0,0,0,0,0.261185628199839,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0.204000691244253,0,0,0,0.125542639594803,0,0,0,0.393364276848904,0,0,0,0,0,0,0,0,1.66198622559563,0.200544447470142,0.651032612147555,3.80656306207871,1.29557466407592,1.54545340580512,0.436194716338694,0,1.4555043671269,1.16214518452842,0.411167888021826,1.23882548358041,2.58923153089935,2.0492856522328,4.7296445977717,3.7922024881028,4.51839278508678,2.70852973188684,0.941211697713023,0.545812300115692,1.79778787556068,1.22433556948361,1.92557416245656,3.19668562899521,0.989553900560148,0.997318288108159,1.27867425159808,1.45104619314292,0.56738522469114,2.4912889959823,3.01498398308092,3.65038042894141,5.64690996233303,0,1.84138817993782,2.21523671208619,0,0.212604299965044,0.209658645508376,0.22465726229299,0.150176892841506,0,0.285012743741249,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0.32592226663359,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.130979075497713,0,0,0.324547393654683,0.348259474598534,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0.150238058906597,0,0.179389635688862,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0.116193942869518,0.10366105501537,0,0,1.56449532329816,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0.590789906681404,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0.190254152234598,0,0,0.984868024349589,0,0.148631162288728,0,0,0,0,0,0,0.985326475791887,0.088048434013226,5.80518723514162,11.38547631994,3.28230326908588,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0.128343036279748,0,0,0,0,0,0,2.99161459204025,0,0.24538298343828,0,0,0.207970861530807,0,0,0,0,0,0,0,0.368738337083406,0.0868836144680828,0.195801157462741,0,0,0,0.320182673410333,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0.0920809889358963,0,0,0,0.451199612907412,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0.831076008928724,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08890984861323,0.376575203107117,0,0,0,0,1.01489521846434,0,0,0,0,0,0.540031437238115,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0.223676107892416,0.166849141711909,0,0,0,0,0,0,0,1.02555725490326,0,0,0,0,0,0,0,0,0.222617410045812,0,0,0,0,0.503865495708552,0,0,0,0,0,1.02314474045374,0,0,0,0,0.278304294485554,0,0,0,0.724999575434793,0,0.254253650292766,0,0,0,0,0,0.241192877250816,0,0,0,0.219385397153973,0,0,0.230850775511391,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0.0884575645033392,0,0,0,0,0.943615861729479,0,0.468528891450678,0,0.19566461893209,0,0,0,0,0,0.300646838828985,0.207376382794494,0,0,0,0,0.569219092059585,0,0,0,0.174118413160805,0.17472666824203,0,0,0,0.0821154570532092,0,0,0.451961481561065,0,0,0.443175571691151,0.391102765469606,0.0801588202515337,0.213452994739353,0,0.144090417154106,0,0.343189995723929,0,0,0.235694034616795,0,0,0,0,1.80126086612937,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.681017030557878,0.160753148465019,0.412618309791701,0,0,0,0,0,0.157611414598396,0.577000469484979,0.633602019116439,0,0.575745591958336,0,0,0,0,0,0,0,0.082092520749339,0,0,0.439656701034247,1.32506888912221,0.258565912723101,0.13223260174269,0,0,0.106787412567695,0.157204305099666,0,0,0,0,0,1.63205341010842,1.7548292581589,3.982492497925,1.63936315354902,0,0,0,0,0,0.221858103073705,0.434674820589684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0.132864840313363,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0.123935764259002,0,0,1.10406443001755,0,0,0,0.192687675289379,0,0.319267718114302,0.205116364240755,0,0,0.161475645631851,2.85538840518309,0,0,0,0,0,0,0,0.225630985047772,0.20170506870352,0,0,0,0.295712172434091,0.135075169236789,0,0,0.19024743058172,0,0,0,0,0,0,0,0.606965604236632,0,0,0,0,0.40781839786099,0.197318320688547,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0.521574816907738,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281951753939561,0.322289439867886,0,0.357107877211315,0,0,0,0,0.143339583151451,0,0.203974470572744,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0,0.829169439458779,0,0,0,0,0.186224142887574,0,0,0,0,0,0.26940821205835,0,0.332660356546013,0,0.106727345877715,0,0,0,0,0,0,0,0 | |phase1_expression=0.363356758541113,1.07050261945492,0.140954404095971,0,0,0,0,0,0.261185628199839,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0.204000691244253,0,0,0,0.125542639594803,0,0,0,0.393364276848904,0,0,0,0,0,0,0,0,1.66198622559563,0.200544447470142,0.651032612147555,3.80656306207871,1.29557466407592,1.54545340580512,0.436194716338694,0,1.4555043671269,1.16214518452842,0.411167888021826,1.23882548358041,2.58923153089935,2.0492856522328,4.7296445977717,3.7922024881028,4.51839278508678,2.70852973188684,0.941211697713023,0.545812300115692,1.79778787556068,1.22433556948361,1.92557416245656,3.19668562899521,0.989553900560148,0.997318288108159,1.27867425159808,1.45104619314292,0.56738522469114,2.4912889959823,3.01498398308092,3.65038042894141,5.64690996233303,0,1.84138817993782,2.21523671208619,0,0.212604299965044,0.209658645508376,0.22465726229299,0.150176892841506,0,0.285012743741249,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0.32592226663359,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.130979075497713,0,0,0.324547393654683,0.348259474598534,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0.150238058906597,0,0.179389635688862,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0.116193942869518,0.10366105501537,0,0,1.56449532329816,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0.590789906681404,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0.190254152234598,0,0,0.984868024349589,0,0.148631162288728,0,0,0,0,0,0,0.985326475791887,0.088048434013226,5.80518723514162,11.38547631994,3.28230326908588,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0.128343036279748,0,0,0,0,0,0,2.99161459204025,0,0.24538298343828,0,0,0.207970861530807,0,0,0,0,0,0,0,0.368738337083406,0.0868836144680828,0.195801157462741,0,0,0,0.320182673410333,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0.0920809889358963,0,0,0,0.451199612907412,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0.831076008928724,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08890984861323,0.376575203107117,0,0,0,0,1.01489521846434,0,0,0,0,0,0.540031437238115,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0.223676107892416,0.166849141711909,0,0,0,0,0,0,0,1.02555725490326,0,0,0,0,0,0,0,0,0.222617410045812,0,0,0,0,0.503865495708552,0,0,0,0,0,1.02314474045374,0,0,0,0,0.278304294485554,0,0,0,0.724999575434793,0,0.254253650292766,0,0,0,0,0,0.241192877250816,0,0,0,0.219385397153973,0,0,0.230850775511391,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0.0884575645033392,0,0,0,0,0.943615861729479,0,0.468528891450678,0,0.19566461893209,0,0,0,0,0,0.300646838828985,0.207376382794494,0,0,0,0,0.569219092059585,0,0,0,0.174118413160805,0.17472666824203,0,0,0,0.0821154570532092,0,0,0.451961481561065,0,0,0.443175571691151,0.391102765469606,0.0801588202515337,0.213452994739353,0,0.144090417154106,0,0.343189995723929,0,0,0.235694034616795,0,0,0,0,1.80126086612937,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.681017030557878,0.160753148465019,0.412618309791701,0,0,0,0,0,0.157611414598396,0.577000469484979,0.633602019116439,0,0.575745591958336,0,0,0,0,0,0,0,0.082092520749339,0,0,0.439656701034247,1.32506888912221,0.258565912723101,0.13223260174269,0,0,0.106787412567695,0.157204305099666,0,0,0,0,0,1.63205341010842,1.7548292581589,3.982492497925,1.63936315354902,0,0,0,0,0,0.221858103073705,0.434674820589684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0.132864840313363,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0.123935764259002,0,0,1.10406443001755,0,0,0,0.192687675289379,0,0.319267718114302,0.205116364240755,0,0,0.161475645631851,2.85538840518309,0,0,0,0,0,0,0,0.225630985047772,0.20170506870352,0,0,0,0.295712172434091,0.135075169236789,0,0,0.19024743058172,0,0,0,0,0,0,0,0.606965604236632,0,0,0,0,0.40781839786099,0.197318320688547,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0.521574816907738,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281951753939561,0.322289439867886,0,0.357107877211315,0,0,0,0,0.143339583151451,0,0.203974470572744,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0,0.829169439458779,0,0,0,0,0.186224142887574,0,0,0,0,0,0.26940821205835,0,0.332660356546013,0,0.106727345877715,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr12:69327112..69327126,+ | |short_description=p@chr12:69327112..69327126,+ | ||
}} | }} |
Latest revision as of 11:48, 24 July 2015
Short description: | p@chr12:69327112..69327126, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:69327112..69327126, + |
Coexpression cluster: | C2235_Mast_CD14_Basophils_immature_Neutrophils_Monocytederived_mature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.22e-41 | 76 |
bone element | 6.43e-38 | 82 |
skeletal element | 5.16e-34 | 90 |
hematopoietic system | 3.93e-33 | 98 |
blood island | 3.93e-33 | 98 |
immune system | 1.01e-32 | 93 |
skeletal system | 5.29e-30 | 100 |
hemolymphoid system | 1.76e-29 | 108 |
musculoskeletal system | 1.82e-15 | 167 |
lateral plate mesoderm | 1.12e-12 | 203 |
connective tissue | 3.33e-10 | 371 |