FFCP PHASE1:Hg19::chr9:107690382..107690393,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=19 | |EntrezGene=19 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29 | |HGNC=29 | ||
|TSSclassifier=strong | |||
|UniProt=B1AMI1,B1AMI2 | |UniProt=B1AMI1,B1AMI2 | ||
|association_with_transcript=26bp_to_ENST00000374733,ENST00000423487_5end | |association_with_transcript=26bp_to_ENST00000374733,ENST00000423487_5end | ||
|cluster_id=chr9:107690382..107690393,- | |||
|coexpression_cluster_id=C6 | |||
|description=CAGE_peak_2_at_ABCA1_5end | |description=CAGE_peak_2_at_ABCA1_5end | ||
|id=chr9:107690382..107690393,- | |id=chr9:107690382..107690393,- | ||
|ontology_enrichment_celltype=CL:0000766!1.36e-31!76;CL:0002057!2.66e-30!42;CL:0002009!3.03e-27!65;CL:0000557!1.67e-26!71;CL:0000860!1.82e-26!45;CL:0002194!4.92e-26!63;CL:0000576!4.92e-26!63;CL:0000040!4.92e-26!63;CL:0000559!4.92e-26!63;CL:0000839!2.93e-25!70;CL:0000738!7.44e-22!140;CL:0000763!1.36e-17!112;CL:0000049!1.36e-17!112;CL:0002031!2.53e-15!124;CL:0002087!2.95e-15!119;CL:0000037!2.94e-13!172;CL:0000566!2.94e-13!172;CL:0002032!1.22e-11!165;CL:0000837!1.22e-11!165;CL:0000988!6.19e-11!182;CL:0000034!8.71e-08!444;CL:0002393!1.40e-07!9;CL:0002397!1.40e-07!9;CL:0000048!3.00e-07!430;CL:0000134!3.95e-07!358;CL:0000723!4.03e-07!436;CL:0000094!5.85e-07!8;CL:0002320!8.71e-07!365;CL:0000219!9.22e-07!390 | |ontology_enrichment_celltype=CL:0000766!1.36e-31!76;CL:0002057!2.66e-30!42;CL:0002009!3.03e-27!65;CL:0000557!1.67e-26!71;CL:0000860!1.82e-26!45;CL:0002194!4.92e-26!63;CL:0000576!4.92e-26!63;CL:0000040!4.92e-26!63;CL:0000559!4.92e-26!63;CL:0000839!2.93e-25!70;CL:0000738!7.44e-22!140;CL:0000763!1.36e-17!112;CL:0000049!1.36e-17!112;CL:0002031!2.53e-15!124;CL:0002087!2.95e-15!119;CL:0000037!2.94e-13!172;CL:0000566!2.94e-13!172;CL:0002032!1.22e-11!165;CL:0000837!1.22e-11!165;CL:0000988!6.19e-11!182;CL:0000034!8.71e-08!444;CL:0002393!1.40e-07!9;CL:0002397!1.40e-07!9;CL:0000048!3.00e-07!430;CL:0000134!3.95e-07!358;CL:0000723!4.03e-07!436;CL:0000094!5.85e-07!8;CL:0002320!8.71e-07!365;CL:0000219!9.22e-07!390 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.21e-55;33!CL:0002057;1.21e-55;33!CL:0000576;2.25e-43;48!CL:0000473;1.81e-42;39!CL:0000234;1.81e-42;39!CL:0000766;2.35e-36;69!CL:0000763;3.35e-16;100!CL:0000094;9.19e-16;8!CL:0002087;2.11e-15;104!CL:0000738;3.67e-14;136!CL:0002393;6.96e-13;6!CL:0002397;6.96e-13;6!CL:0000081;5.52e-11;11!CL:0000988;1.94e-08;177!CL:0000219;2.34e-07;193!CL:0000226;5.25e-07;3!CL:0000842;5.25e-07;3!CL:0000775;6.22e-07;3!CL:0000767;6.47e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,2.01e-78,72;CL:0000860,3.38e-78,42;CL:0002057,3.38e-78,42;CL:0000473,1.54e-73,48;CL:0000234,1.54e-73,48;CL:0000557,6.81e-66,67;CL:0002009,1.41e-64,61;CL:0000839,1.58e-61,66;CL:0002194,2.28e-61,59;CL:0000576,2.28e-61,59;CL:0000040,2.28e-61,59;CL:0000559,2.28e-61,59;CL:0000738,8.22e-61,136;CL:0000763,2.99e-54,108;CL:0000049,2.99e-54,108;CL:0000037,2.89e-48,168;CL:0002031,8.38e-46,120;CL:0002087,4.94e-45,115;CL:0000988,9.61e-45,177;CL:0002032,1.84e-44,161;CL:0000837,1.84e-44,161;CL:0000134,1.34e-20,354;CL:0000034,2.53e-20,441;CL:0000048,4.17e-20,427;CL:0002320,9.18e-20,361;CL:0000723,1.71e-19,433;CL:0002393,1.66e-17,9;CL:0002397,1.66e-17,9;CL:0000219,7.77e-17,386;CL:0000094,7.26e-16,8;CL:0000081,4.68e-11,11;CL:0000775,5.39e-07,3;CL:0000226,5.84e-07,3;CL:0000842,5.84e-07,3;CL:0000767,6.58e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;1.28e-55;42!CL:0000049;5.92e-15;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001474!4.01e-22!86;UBERON:0002371!4.37e-22!80;UBERON:0004765!7.24e-20!101;UBERON:0001434!7.24e-20!101;UBERON:0002405!4.93e-18!115;UBERON:0002390!2.36e-17!102;UBERON:0003061!2.36e-17!102;UBERON:0002193!3.35e-15!112;UBERON:0002204!7.48e-15!167;UBERON:0003081!3.56e-10!216 | |ontology_enrichment_uberon=UBERON:0001474!4.01e-22!86;UBERON:0002371!4.37e-22!80;UBERON:0004765!7.24e-20!101;UBERON:0001434!7.24e-20!101;UBERON:0002405!4.93e-18!115;UBERON:0002390!2.36e-17!102;UBERON:0003061!2.36e-17!102;UBERON:0002193!3.35e-15!112;UBERON:0002204!7.48e-15!167;UBERON:0003081!3.56e-10!216 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.87e-56,76;UBERON:0001474,5.09e-51,82;UBERON:0002390,2.97e-46,98;UBERON:0003061,2.97e-46,98;UBERON:0004765,4.14e-45,90;UBERON:0002405,3.73e-43,93;UBERON:0002193,1.83e-40,108;UBERON:0001434,4.71e-39,100;UBERON:0002204,1.25e-27,167;UBERON:0003081,6.05e-23,203;UBERON:0002384,1.26e-18,371;UBERON:0000926,1.75e-11,315;UBERON:0004120,1.75e-11,315;UBERON:0006603,1.75e-11,315 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,1.26343974685366,0.261185628199839,0,0,0,0.263766978228454,0.123766352960047,0,0.672325146451775,0,0.730310090387373,0,0,0.408001382488506,0,0.286235987131057,0.273748850145768,0,0,0,0,3.93364276848904,3.0706351847777,6.50227717927519,0,0,0,0.154934401160603,0.284338464974843,0.293600439334847,57.0615270787834,52.9437341321174,42.9681524017387,1.11957737119962,0.971680998056939,0.77272670290256,1.89017710413434,3.02300754951048,5.33684934613196,8.36744532860465,10.2791972005456,12.078548464909,3.45230870786581,7.68482119587302,5.91205574721463,20.3399951634605,16.7826017731795,10.8341189275473,7.15320890261898,5.73102915121476,9.43838634669355,23.5684597125595,18.9348125974895,33.8848676673492,1.31940520074686,3.39088217956774,4.68847225585964,33.9544809195443,38.5821952789975,44.8432019276814,1.50749199154046,3.12889751052121,2.17188844705117,32.0861736395685,33.5132648748684,35.4437873933791,2.74631872205524,5.10250319916104,3.77385561915077,1.57260083605093,1.35159203557356,1.6072558669708,3.70516566863623,1.19350006319454,2.55729815270488,0,1.09227722252426,0,1.70692089026603,0,0,1.32208974556972,0,3.98449078376614,1.76171156811282,1.52909291250092,1.32171328579026,11.2101712596307,0,0.393419540227666,1.17903228824749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0.301150238155546,0,0,0,0,0.403213486449465,0.267440195783507,0.579297615531196,2.43806866313962,0,0,0,0,0,0,0,0,0,0.087834785693126,0.327447688744282,0,0,0.324547393654683,0.174129737299267,0.398873881556595,3.10037811596945,0.571994910780128,1.48583000531826,0,0,0,0,0,0,0.417989933073621,0,0,0.33472061276467,0,0,0,0,0,0.17859945656816,0,0,0,0,0,3.9534125230819,7.75560528296651,0,0,0.25326102332916,1.98613771219828,1.43418310374407,0.354668382198357,0,0,0.24666754841716,0,0.538842688278752,0,0.302714855289863,0.576175924479999,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0.741800787835671,0,0,0,0.125118519871964,0,0,0,0.901428353439581,0.113432183160021,0.358779271377724,0,0,0,0.206105058476878,0.257640540045629,0,0.337552664482532,0.0974370051611986,0,0.184099797284599,0.323292113637624,0,0.201504196455281,0,0.773043412653187,0.272746120590835,0.573609190778008,0.121973706129595,0.132529768321485,0.232387885739037,0.310983165046111,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0.738155454624648,0,0,0,0,1.96565443335525,0,0,0.122988438543114,0.171567810298526,0.219500570817251,0,0.100528972411631,0.185176890317059,0,0,0,0,1.17408694235822,0,0.462985512576611,0,0,0,0.738651018262192,0.702012795417713,0.594524649154913,0.93733833986777,0.335964256397719,0.425325291727159,0.0895585227028483,0,0,0,0,3.31724984865235,2.45003920808834,2.77733353538036,0,0,0,0,0,0,0,0.112131084345361,0.43596006883328,0,0.387815147273333,0,0,0,0,0,0,0,0.285955987316295,0,0.823240336780769,0,0.355391948742546,0,0.301439377059586,0,0.299918973546171,0,2.51128545716063,2.10833939483032,0.479249710983165,0,0,0,0.205476322550383,0,0,2.56139988262505,1.07813787429759,1.92514554419623,1.01637849688985,0,0,0.167516265334349,1.27587750330633,8.23907726341901,2.99161459204025,5.8018171881045,0.24538298343828,0.500170521059677,0,0.207970861530807,0,0.157702415033935,0,0,2.27407504055985,0,0.664225598535437,0.184369168541703,0.0868836144680828,0,0,3.10152039184331,6.03999762292127,5.33637789017222,0,0,0.30239029332968,0.248107807818777,0,0.561320188866147,0.256278298511402,1.02341449813341,0.160853921143607,0,0.308419387605311,0,0.164254312027618,0,0.232420756919918,0.120859449591622,0.200506470303285,0,0.229628896329213,0.728364672026868,0.131124414959424,0,0,0.784349769176855,0,0.633309773357254,0,0,0.215915916102139,0,0,0,0,0,0,0.219259876645935,0,0.256450125116389,0,0.325378394664303,0.515205058238611,0,0.082509499920588,0,0.650060246036521,0,0.48335359146061,0,0.307007349452259,0.137836572484531,0.107420244868274,0,0,0,0.661139661443912,0.576570202095319,0.638063562472921,0.30347334256665,0,0.94443704049192,1.3940745403212,1.23213432070436,0,1.73986598415015,0.9266210955196,1.14499909393593,0,0,0,0,0.42793898803392,0.95460974377781,0.78494864019923,0,0,0,0.606547444719948,0,1.68503382495592,0,0.731140468893853,1.05650146756755,0,0.848432591722276,1.13008116620243,0.551365343546124,0,0.876901770507525,0,0,0.202910376962704,0.30982349809975,0,0,0.196498082026242,0,0,0.211107635297664,0.329294892959902,0,0,0,0.670302275535787,1.08890984861323,0.470719003883896,0,0,0.443430153536676,0,0,0,0,0.476463550915578,0.411362273086194,0,0,0,0.427296284509893,0,0,0,0.144269212976445,0,0.159426272728822,0,0.191505370132367,0,0,0,1.14117339516596,0,0,0,0.1605880751037,0,1.27753871307098,0,0,0.223676107892416,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0.284136146806413,0,0,0,0,0,0.333926115068718,0.329607748453519,0,0.796991953004279,0.828851746593443,0,0.306806047506464,0,0.622079175323615,0.0898683511473268,0,0,0.295930216910801,0,0,0,0.0927680981618513,0,0,0,0,0.568967241427498,0.254253650292766,0,0,0,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| ||
|short_description=p2@ABCA1 | |short_description=p2@ABCA1 | ||
}} | }} |
Latest revision as of 23:19, 19 September 2015
Short description: | p2@ABCA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ABCA1_5end |
Coexpression cluster: | C6_CD14_Eosinophils_Basophils_Peripheral_CD34_Natural_immature |
Association with transcript: | 26bp_to_ENST00000374733, ENST00000423487_5end |
EntrezGene: | ABCA1 |
HGNC: | 29 |
UniProt: | B1AMI1B1AMI2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.87e-56 | 76 |
bone element | 5.09e-51 | 82 |
hematopoietic system | 2.97e-46 | 98 |
blood island | 2.97e-46 | 98 |
skeletal element | 4.14e-45 | 90 |
immune system | 3.73e-43 | 93 |
hemolymphoid system | 1.83e-40 | 108 |
skeletal system | 4.71e-39 | 100 |
musculoskeletal system | 1.25e-27 | 167 |
lateral plate mesoderm | 6.05e-23 | 203 |
connective tissue | 1.26e-18 | 371 |
mesoderm | 1.75e-11 | 315 |
mesoderm-derived structure | 1.75e-11 | 315 |
presumptive mesoderm | 1.75e-11 | 315 |