FFCP PHASE1:Hg19::chr9:16870710..16870763,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54796 | |EntrezGene=54796 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30988 | |HGNC=30988 | ||
|TSSclassifier=strong | |||
|UniProt=B1APH0 | |UniProt=B1APH0 | ||
|association_with_transcript=0bp_to_ENST00000380667,ENST00000484726_5end | |association_with_transcript=0bp_to_ENST00000380667,ENST00000484726_5end | ||
|cluster_id=chr9:16870710..16870763,- | |||
|description=CAGE_peak_1_at_BNC2_5end | |description=CAGE_peak_1_at_BNC2_5end | ||
|id=chr9:16870710..16870763,- | |id=chr9:16870710..16870763,- | ||
|ontology_enrichment_celltype=CL:0000055!1.44e-30!180;CL:0000057!6.16e-16!75;CL:0000680!7.67e-14!57;CL:0000056!7.67e-14!57;CL:0000355!7.67e-14!57;CL:0000187!3.14e-13!54;CL:0000183!2.15e-12!59;CL:0000393!1.36e-11!60;CL:0000211!1.36e-11!60;CL:0000192!6.22e-09!42;CL:0000514!6.22e-09!42;CL:0000222!3.42e-07!119 | |ontology_enrichment_celltype=CL:0000055!1.44e-30!180;CL:0000057!6.16e-16!75;CL:0000680!7.67e-14!57;CL:0000056!7.67e-14!57;CL:0000355!7.67e-14!57;CL:0000187!3.14e-13!54;CL:0000183!2.15e-12!59;CL:0000393!1.36e-11!60;CL:0000211!1.36e-11!60;CL:0000192!6.22e-09!42;CL:0000514!6.22e-09!42;CL:0000222!3.42e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0000187;8.53e-09;55!CL:0000499;8.38e-08;28!CL:0000393;1.91e-07;61!CL:0000211;1.91e-07;61!CL:0000192;2.02e-07;43!CL:0000188;5.79e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.53e-16,76;CL:0000680,1.31e-14,58;CL:0000056,1.31e-14,58;CL:0000355,1.31e-14,58;CL:0000187,6.59e-14,55;CL:0000393,2.57e-12,61;CL:0000211,2.57e-12,61;CL:0000048,4.79e-10,427;CL:0000192,8.66e-10,43;CL:0000514,8.66e-10,43;CL:0000723,3.93e-09,433;CL:0000034,9.98e-09,441;CL:0000499,7.47e-08,28;CL:0000188,4.76e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000355;1.42e-08;58!CL:0000514;2.02e-07;43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.30e-18!83;UBERON:0002329!1.30e-18!83;UBERON:0003077!1.30e-18!83;UBERON:0003059!1.30e-18!83;UBERON:0007282!1.30e-18!83;UBERON:0009618!1.30e-18!83;UBERON:0007285!1.30e-18!83;UBERON:0002385!1.65e-15!63;UBERON:0001015!1.65e-15!63;UBERON:0000383!1.65e-15!63;UBERON:0004290!1.74e-15!70;UBERON:0001134!6.64e-15!61;UBERON:0002036!6.64e-15!61;UBERON:0003082!6.64e-15!61;UBERON:0000486!2.30e-13!82;UBERON:0005256!2.05e-10!143;UBERON:0000475!5.23e-07!365;UBERON:0003102!6.14e-07!95 | |ontology_enrichment_uberon=UBERON:0000914!1.30e-18!83;UBERON:0002329!1.30e-18!83;UBERON:0003077!1.30e-18!83;UBERON:0003059!1.30e-18!83;UBERON:0007282!1.30e-18!83;UBERON:0009618!1.30e-18!83;UBERON:0007285!1.30e-18!83;UBERON:0002385!1.65e-15!63;UBERON:0001015!1.65e-15!63;UBERON:0000383!1.65e-15!63;UBERON:0004290!1.74e-15!70;UBERON:0001134!6.64e-15!61;UBERON:0002036!6.64e-15!61;UBERON:0003082!6.64e-15!61;UBERON:0000486!2.30e-13!82;UBERON:0005256!2.05e-10!143;UBERON:0000475!5.23e-07!365;UBERON:0003102!6.14e-07!95 | ||
|ontology_enrichment_uberon_v019=UBERON:0002385;1.01e-10;31!UBERON:0001015;1.01e-10;31!UBERON:0000383;1.01e-10;31!UBERON:0002204;4.61e-08;70!UBERON:0001134;5.95e-08;16!UBERON:0002036;5.95e-08;16!UBERON:0002384;4.83e-07;198!UBERON:0006876;8.14e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002385,3.88e-16,64;UBERON:0001015,3.88e-16,64;UBERON:0000383,3.88e-16,64;UBERON:0002329,1.85e-15,71;UBERON:0003059,1.85e-15,71;UBERON:0007282,1.85e-15,71;UBERON:0004290,1.85e-15,71;UBERON:0009618,1.85e-15,71;UBERON:0001134,1.87e-15,62;UBERON:0002036,1.87e-15,62;UBERON:0003082,1.87e-15,62;UBERON:0007524,2.58e-15,73;UBERON:0003077,6.28e-15,72;UBERON:0007285,6.28e-15,72;UBERON:0007503,1.51e-13,78;UBERON:0000486,2.79e-13,83;UBERON:0005256,1.84e-10,122;UBERON:0003104,2.91e-10,160;UBERON:0009142,2.91e-10,160;UBERON:0000926,1.46e-08,315;UBERON:0004120,1.46e-08,315;UBERON:0006603,1.46e-08,315;UBERON:0002204,2.03e-07,167 | |||
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|phase1_expression=1.99846217197612,1.49870366723688,1.12763523276777,2.00146596706261,1.34088328328186,0,2.53299878168311,2.52687949370732,2.35067065379855,0.491467873003018,0,3.9319446983431,2.37390280405608,4.82688776544182,9.94192127183747,2.01697543935533,0.602694528023977,3.65155045193687,1.95173119516203,1.35433163884467,3.67201244239655,1.56727360739044,0.572471974262113,1.36874425072884,0.87879847716362,2.9801228241701,2.13461532569859,2.44003422072406,0,1.91914699048606,1.54816123316076,0,0,0,0,0,0,1.10799081706375,1.60435557976113,1.08505435357926,1.79132379391939,2.59114932815184,0.77272670290256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0.637130828648193,0,0,0.150575119077773,0.383959833463255,0,0,0,0,0.267440195783507,1.15859523106239,7.31420598941885,0.670700859703636,0.639312809217652,3.2529523714611,3.50936537445123,3.62116297402059,3.9764297352555,4.37971383272372,5.48301939551594,5.32150553910154,5.09441757020131,2.94702919869853,0.364295288292542,0.741568885568859,0,0,0.132957960518865,0,0,0,0.596287222100115,0,0.694281003215189,0,0,1.6507082516404,0.835979866147242,3.35941786920128,1.06729878806013,2.67776490211736,0,0,0,0.367663080345869,0.81014194788176,0.535798369704479,1.12264686313085,0.788280363383256,0,0.949265659568129,0.732806975721629,0,3.87780264148325,0,3.47880366186723,3.16576279161449,8.87141511448566,12.9076479336966,3.54668382198357,1.12135520028461,1.06748995729705,0.74000264525148,6.22422070799533,2.96363478553314,5.5577047058576,7.26515652695671,8.06646294271999,1.64025002283658,4.05808099879417,0.570471821544449,2.39117888882882,1.40921398372518,0.809364721840658,2.10676210053373,4.69554593886255,6.5102188175237,5.26961483996404,5.94001428641027,3.21447008062124,3.64064544775211,1.43723628363248,4.54507507675979,6.50616303334214,4.71008996323111,4.38977620880838,3.0648779579902,3.60571341375832,1.02088964844019,1.07633781413317,3.20336083227851,5.08636562782948,3.30100205692843,3.7098910525838,4.63752972082133,2.23340227597908,3.54430297706659,1.16924406193438,5.3011092591264,2.57739716198438,8.40559495457822,2.13005755509969,0.906768884048762,1.69560592310488,0.193260853163297,0.272746120590835,0.573609190778008,1.95157929807353,1.85541675650079,1.62671520017326,0.932949495138334,0.756962552626885,2.55484151353081,1.56449532329816,1.92972281457866,2.76269842704961,1.39310378409594,2.16563844500876,0.354920400119532,0.337169380156203,0.241011029883482,0.110293972732394,0.217879444092406,0.474541238222193,0,0,0,0,0,3.7041661019826,2.94017422771084,0,0,0.590789906681404,0,0,2.05881372358231,0.658501712451753,0,0.201057944823262,0.0925884451585296,1.3032332212413,1.03993478527958,0,2.66639931442677,3.75707821554629,0.144366447761074,0,0,0,0,1.96973604869918,0.234004265139238,0.445893486866185,0.93733833986777,1.00789276919316,1.13420077793909,0,0,0,31.0377839874444,10.125569911521,4.97587477297853,5.6206781832615,7.06957627187728,2.85740524314761,6.49380323449072,3.51652341630141,0,1.85089486865982,3.60411669412701,3.42991719156694,3.02753927732474,5.66748089483264,1.68678057388185,2.58543431515556,0,0,5.31876233169741,0,1.54324424557285,4.25547396069835,3.19706614819319,2.7165818795048,4.88359444852299,2.46972101034231,1.95441710576241,2.84313558994037,0.791951872933429,2.71295439353627,6.97226766880235,4.1988656296464,3.64871341923571,1.50677127429638,0,1.4377491329495,3.44585807502342,4.27910715122155,1.88215698667853,2.4657158706046,4.1184021545176,0.672510863961164,1.77327684181734,3.88129634747131,5.39040752374943,0,0,0,0.167516265334349,0,0,0,0,7.85225547002495,3.50119364741774,4.06897535549603,4.57535895367776,3.21172179834891,3.94256037584837,5.85707074963566,3.00946099727719,0,3.10419213877515,2.65690239414175,3.87175253937577,5.38678409702114,0.783204629850962,1.71571711905428,0.620304078368662,0.862856803274467,0.533637789017222,0.303127571446259,1.66435439510497,1.81434175997808,1.24053903909388,4.29693525206575,1.96462066103151,1.53766979106841,2.55853624533352,2.73451665944133,1.48418066444991,4.78050050788232,3.72879623157567,4.27061211271807,3.11552657510173,3.37010097533882,0,0,0,2.64073230778596,3.27764102412091,6.42509633301178,0,0.308061348417659,0,0,1.05551628892876,0,0,1.72732732881711,0,1.62567862526312,1.00337954770971,0.764628819135115,0,0.447749509444357,0,0,0.769350375349168,1.64007322849853,0.976135183992909,1.13345112812495,0.457847324091717,0.082509499920588,0,0,1.6068392984416,4.8335359146061,6.16194468458577,7.21467271212809,5.92697261683481,12.3533281598515,8.26595155311102,8.26698285936179,3.82837753280971,0,0,0,0,1.39453664789186,7.870308670766,2.7881490806424,4.31247012246524,0,4.34966496037536,1.29726953372744,1.43124886741991,7.07100901783368,9.8077621662805,7.62520775695299,3.07077349573601,13.6940476170855,4.45484547096312,1.56989728039846,9.53324025191568,5.76527762445715,7.18655654308687,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| ||
|short_description=p1@BNC2 | |short_description=p1@BNC2 | ||
}} | }} |
Latest revision as of 20:13, 16 September 2015
Short description: | p1@BNC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_BNC2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000380667, ENST00000484726_5end |
EntrezGene: | BNC2 |
HGNC: | 30988 |
UniProt: | B1APH0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.53e-16 | 76 |
muscle precursor cell | 1.31e-14 | 58 |
myoblast | 1.31e-14 | 58 |
multi-potent skeletal muscle stem cell | 1.31e-14 | 58 |
muscle cell | 6.59e-14 | 55 |
electrically responsive cell | 2.57e-12 | 61 |
electrically active cell | 2.57e-12 | 61 |
multi fate stem cell | 4.79e-10 | 427 |
smooth muscle cell | 8.66e-10 | 43 |
smooth muscle myoblast | 8.66e-10 | 43 |
somatic stem cell | 3.93e-09 | 433 |
stem cell | 9.98e-09 | 441 |
stromal cell | 7.47e-08 | 28 |
cell of skeletal muscle | 4.76e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
muscle tissue | 3.88e-16 | 64 |
musculature | 3.88e-16 | 64 |
musculature of body | 3.88e-16 | 64 |
somite | 1.85e-15 | 71 |
presomitic mesoderm | 1.85e-15 | 71 |
presumptive segmental plate | 1.85e-15 | 71 |
dermomyotome | 1.85e-15 | 71 |
trunk paraxial mesoderm | 1.85e-15 | 71 |
skeletal muscle tissue | 1.87e-15 | 62 |
striated muscle tissue | 1.87e-15 | 62 |
myotome | 1.87e-15 | 62 |
dense mesenchyme tissue | 2.58e-15 | 73 |
paraxial mesoderm | 6.28e-15 | 72 |
presumptive paraxial mesoderm | 6.28e-15 | 72 |
epithelial vesicle | 1.51e-13 | 78 |
multilaminar epithelium | 2.79e-13 | 83 |
trunk mesenchyme | 1.84e-10 | 122 |
mesenchyme | 2.91e-10 | 160 |
entire embryonic mesenchyme | 2.91e-10 | 160 |
mesoderm | 1.46e-08 | 315 |
mesoderm-derived structure | 1.46e-08 | 315 |
presumptive mesoderm | 1.46e-08 | 315 |
musculoskeletal system | 2.03e-07 | 167 |