FFCP PHASE1:Hg19::chr9:696319..696338,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_AB205113_5end | |association_with_transcript=0bp_to_AB205113_5end | ||
|cluster_id=chr9:696319..696338,+ | |||
|coexpression_cluster_id=C29 | |||
|description=CAGE_peak_1_at_AB205113_5end | |description=CAGE_peak_1_at_AB205113_5end | ||
|id=chr9:696319..696338,+ | |id=chr9:696319..696338,+ | ||
|ontology_enrichment_celltype=CL:0002541!9.99e-09!3 | |ontology_enrichment_celltype=CL:0002541!9.99e-09!3 | ||
|ontology_enrichment_celltype_v019=CL:0000136;5.12e-21;13!CL:0002536;1.64e-09;2!CL:0000349;2.28e-08;19!CL:0002541;9.37e-07;3!CL:0002577;9.37e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,2.86e-18,15;CL:0002536,1.44e-09,2;CL:0000349,2.20e-08,19;CL:0002577,9.12e-07,3;CL:0002541,9.64e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0005425;1.12e-17;1!UBERON:0006965;1.64e-09;2!UBERON:0003056;9.37e-07;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p1@AB205113 | |short_description=p1@AB205113 | ||
}} | }} |
Latest revision as of 02:22, 1 August 2015
Short description: | p1@AB205113 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AB205113_5end |
Coexpression cluster: | C29_mature_adipose_Adipocyte_breast_Lymphatic_vein_heart |
Association with transcript: | 0bp_to_AB205113_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 2.86e-18 | 15 |
amniotic epithelial cell | 1.44e-09 | 2 |
extraembryonic cell | 2.20e-08 | 19 |
placental epithelial cell | 9.12e-07 | 3 |
chorionic membrane mesenchymal stem cell | 9.64e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
pulmonary valve | 7.37e-18 | 1 |
semi-lunar valve | 7.37e-18 | 1 |
cranial nerve II | 1.44e-17 | 1 |
cranial nerve | 1.44e-17 | 1 |
nerve trunk | 1.44e-17 | 1 |
nerve connecting eye with brain | 1.44e-17 | 1 |
nerve | 1.44e-17 | 1 |
retinal neural layer | 1.44e-17 | 1 |
presumptive neural retina | 1.44e-17 | 1 |
extraembryonic membrane | 3.60e-11 | 14 |
membranous layer | 3.60e-11 | 14 |
chorion | 2.58e-10 | 7 |
neural tissue | 1.86e-09 | 2 |
multi cell component structure | 1.86e-09 | 2 |
neuron projection bundle | 1.86e-09 | 2 |
valve | 8.15e-07 | 3 |
cardiac mesenchyme | 8.15e-07 | 3 |
cardial valve | 8.15e-07 | 3 |
tunica intima | 8.15e-07 | 3 |
heart layer | 8.15e-07 | 3 |
endocardium | 8.15e-07 | 3 |
endocardial cushion | 8.15e-07 | 3 |
presumptive endocardium | 8.15e-07 | 3 |
extraembryonic structure | 9.50e-07 | 24 |
egg chorion | 9.64e-07 | 3 |