FFCP PHASE1:Hg19::chr16:56700737..56700752,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:56700737..56700752,+ | |||
|coexpression_cluster_id=C129 | |||
|description=CAGE_peak_at_chr16:56700737..56700752,+ | |description=CAGE_peak_at_chr16:56700737..56700752,+ | ||
|id=chr16:56700737..56700752,+ | |id=chr16:56700737..56700752,+ | ||
|ontology_enrichment_celltype=CL:0000349!9.31e-07!3;CL:0002577!9.31e-07!3 | |ontology_enrichment_celltype=CL:0000349!9.31e-07!3;CL:0002577!9.31e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000182;4.18e-10;12!CL:0000039;5.00e-10;7!CL:0000586;5.00e-10;7!CL:0000817;1.01e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,4.44e-10,12;CL:0000039,5.57e-10,7;CL:0000586,5.57e-10,7 | |||
|ontology_enrichment_development_v019=UBERON:0005425;1.65e-08;1!UBERON:0009117;3.68e-07;10!UBERON:0005564;3.68e-07;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002107;8.70e-14;19!UBERON:0006925;8.70e-14;19!UBERON:0002423;2.34e-10;25!UBERON:0002368;2.65e-09;33!UBERON:0000473;7.78e-09;8!UBERON:0000941;1.65e-08;1!UBERON:0001785;1.65e-08;1!UBERON:0002464;1.65e-08;1!UBERON:0004904;1.65e-08;1!UBERON:0001021;1.65e-08;1!UBERON:0002365;2.70e-08;31!UBERON:0002330;2.70e-08;31!UBERON:0005409;5.28e-08;22!UBERON:0000922;6.71e-08;49!UBERON:0000949;1.78e-07;43!UBERON:0000160;6.34e-07;17!UBERON:0002108;7.16e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,9.32e-14,19;UBERON:0006925,9.32e-14,19;UBERON:0008836,9.32e-14,19;UBERON:0008835,8.18e-12,22;UBERON:0003894,8.18e-12,22;UBERON:0009854,2.81e-11,23;UBERON:0007499,2.46e-10,25;UBERON:0009497,2.46e-10,25;UBERON:0000015,2.46e-10,25;UBERON:0002423,2.46e-10,25;UBERON:0006235,2.46e-10,25;UBERON:0004161,2.46e-10,25;UBERON:0009856,6.43e-10,26;UBERON:0002368,1.08e-09,35;UBERON:0000949,1.34e-09,45;UBERON:0000473,8.55e-09,8;UBERON:0000941,1.53e-08,1;UBERON:0001785,1.53e-08,1;UBERON:0002464,1.53e-08,1;UBERON:0004904,1.53e-08,1;UBERON:0001021,1.53e-08,1;UBERON:0003902,1.53e-08,1;UBERON:0005425,1.53e-08,1;UBERON:0002365,3.10e-08,31;UBERON:0002330,3.10e-08,31;UBERON:0005409,4.55e-07,25;UBERON:0000160,6.29e-07,17;UBERON:0002108,7.05e-07,4 | |||
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| ||
|short_description=p@chr16:56700737..56700752,+ | |short_description=p@chr16:56700737..56700752,+ | ||
}} | }} |
Latest revision as of 10:23, 25 July 2015
Short description: | p@chr16:56700737..56700752, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:56700737..56700752, + |
Coexpression cluster: | C129_liver_Hepatocyte_colon_duodenum_temporal_testicular_small |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 4.44e-10 | 12 |
germ line cell | 5.57e-10 | 7 |
germ cell | 5.57e-10 | 7 |
Ontology term | p-value | n |
---|---|---|
liver | 9.32e-14 | 19 |
digestive gland | 9.32e-14 | 19 |
liver bud | 9.32e-14 | 19 |
hepatic diverticulum | 8.18e-12 | 22 |
liver primordium | 8.18e-12 | 22 |
digestive tract diverticulum | 2.81e-11 | 23 |
epithelial sac | 2.46e-10 | 25 |
epithelium of foregut-midgut junction | 2.46e-10 | 25 |
anatomical boundary | 2.46e-10 | 25 |
hepatobiliary system | 2.46e-10 | 25 |
foregut-midgut junction | 2.46e-10 | 25 |
septum transversum | 2.46e-10 | 25 |
sac | 6.43e-10 | 26 |
endocrine gland | 1.08e-09 | 35 |
endocrine system | 1.34e-09 | 45 |
testis | 8.55e-09 | 8 |
cranial nerve II | 1.53e-08 | 1 |
cranial nerve | 1.53e-08 | 1 |
nerve trunk | 1.53e-08 | 1 |
nerve connecting eye with brain | 1.53e-08 | 1 |
nerve | 1.53e-08 | 1 |
retinal neural layer | 1.53e-08 | 1 |
presumptive neural retina | 1.53e-08 | 1 |
exocrine gland | 3.10e-08 | 31 |
exocrine system | 3.10e-08 | 31 |
gastrointestinal system | 4.55e-07 | 25 |
intestine | 6.29e-07 | 17 |
small intestine | 7.05e-07 | 4 |