FFCP PHASE1:Hg19::chr16:88923519..88923561,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51693 | |EntrezGene=51693 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30887 | |HGNC=30887 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UL33 | |UniProt=Q9UL33 | ||
|association_with_transcript=13bp_to_NM_016209,uc002fmc.2,uc002fmd.3,uc002fme.3_5end | |association_with_transcript=13bp_to_NM_016209,uc002fmc.2,uc002fmd.3,uc002fme.3_5end | ||
|cluster_id=chr16:88923519..88923561,+ | |||
|description=CAGE_peak_1_at_TRAPPC2L_5end | |description=CAGE_peak_1_at_TRAPPC2L_5end | ||
|id=chr16:88923519..88923561,+ | |id=chr16:88923519..88923561,+ | ||
|ontology_enrichment_celltype=CL:0000222!3.92e-25!119;CL:0002321!1.93e-19!248;CL:0000183!4.47e-19!59;CL:0000220!5.15e-19!246;CL:0000393!3.48e-17!60;CL:0000211!3.48e-17!60;CL:0000187!1.75e-16!54;CL:0000680!4.59e-16!57;CL:0000056!4.59e-16!57;CL:0000355!4.59e-16!57;CL:0000055!1.21e-14!180;CL:0000192!2.07e-14!42;CL:0000514!2.07e-14!42;CL:0000144!7.93e-11!625;CL:0000359!1.29e-10!32;CL:0000548!2.88e-10!679;CL:0000004!2.88e-10!679;CL:0000255!2.88e-10!679;CL:0000213!3.01e-10!57;CL:0000215!3.01e-10!57;CL:0000012!6.38e-10!682;CL:0000115!7.21e-09!35;CL:0002371!1.25e-08!591;CL:0002078!1.35e-08!44;CL:0000003!6.71e-08!722 | |ontology_enrichment_celltype=CL:0000222!3.92e-25!119;CL:0002321!1.93e-19!248;CL:0000183!4.47e-19!59;CL:0000220!5.15e-19!246;CL:0000393!3.48e-17!60;CL:0000211!3.48e-17!60;CL:0000187!1.75e-16!54;CL:0000680!4.59e-16!57;CL:0000056!4.59e-16!57;CL:0000355!4.59e-16!57;CL:0000055!1.21e-14!180;CL:0000192!2.07e-14!42;CL:0000514!2.07e-14!42;CL:0000144!7.93e-11!625;CL:0000359!1.29e-10!32;CL:0000548!2.88e-10!679;CL:0000004!2.88e-10!679;CL:0000255!2.88e-10!679;CL:0000213!3.01e-10!57;CL:0000215!3.01e-10!57;CL:0000012!6.38e-10!682;CL:0000115!7.21e-09!35;CL:0002371!1.25e-08!591;CL:0002078!1.35e-08!44;CL:0000003!6.71e-08!722 | ||
|ontology_enrichment_celltype_v019=CL:0000192;2.01e-10;43!CL:0000359;5.37e-10;32!CL:0000187;1.14e-09;55!CL:0000393;3.96e-09;61!CL:0000211;3.96e-09;61!CL:0000115;5.63e-08;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,5.94e-26,121;CL:0002321,4.06e-20,250;CL:0000393,1.52e-17,61;CL:0000211,1.52e-17,61;CL:0000187,7.68e-17,55;CL:0000680,2.03e-16,58;CL:0000056,2.03e-16,58;CL:0000355,2.03e-16,58;CL:0000192,9.15e-15,43;CL:0000514,9.15e-15,43;CL:0000213,1.26e-10,58;CL:0000215,1.26e-10,58;CL:0000359,1.29e-10,32;CL:0000115,2.86e-09,36;CL:0002078,5.65e-09,45 | |||
|ontology_enrichment_development_v019=CL:0000514;2.01e-10;43!CL:0000355;3.55e-09;58!CL:0000222;3.79e-08;121 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004290!5.70e-18!70;UBERON:0000914!3.02e-17!83;UBERON:0002329!3.02e-17!83;UBERON:0003077!3.02e-17!83;UBERON:0003059!3.02e-17!83;UBERON:0007282!3.02e-17!83;UBERON:0009618!3.02e-17!83;UBERON:0007285!3.02e-17!83;UBERON:0000486!2.05e-15!82;UBERON:0001134!4.66e-15!61;UBERON:0002036!4.66e-15!61;UBERON:0003082!4.66e-15!61;UBERON:0002385!1.33e-13!63;UBERON:0001015!1.33e-13!63;UBERON:0000383!1.33e-13!63;UBERON:0000490!6.50e-13!138;UBERON:0005256!1.07e-12!143;UBERON:0002049!4.35e-12!79;UBERON:0007798!4.35e-12!79;UBERON:0001637!1.38e-10!42;UBERON:0003509!1.38e-10!42;UBERON:0004572!1.38e-10!42;UBERON:0000483!1.54e-10!309;UBERON:0000055!1.87e-10!69;UBERON:0001981!2.44e-10!60;UBERON:0007500!2.44e-10!60;UBERON:0004537!2.44e-10!60;UBERON:0006965!2.44e-10!60;UBERON:0004872!2.61e-10!84;UBERON:0000119!3.27e-10!312;UBERON:0003914!5.38e-10!118;UBERON:0002100!2.36e-09!216;UBERON:0004573!2.88e-07!33;UBERON:0004571!2.88e-07!33;UBERON:0003104!3.08e-07!238;UBERON:0009142!3.08e-07!238;UBERON:0004535!3.18e-07!110;UBERON:0001009!5.05e-07!113 | |ontology_enrichment_uberon=UBERON:0004290!5.70e-18!70;UBERON:0000914!3.02e-17!83;UBERON:0002329!3.02e-17!83;UBERON:0003077!3.02e-17!83;UBERON:0003059!3.02e-17!83;UBERON:0007282!3.02e-17!83;UBERON:0009618!3.02e-17!83;UBERON:0007285!3.02e-17!83;UBERON:0000486!2.05e-15!82;UBERON:0001134!4.66e-15!61;UBERON:0002036!4.66e-15!61;UBERON:0003082!4.66e-15!61;UBERON:0002385!1.33e-13!63;UBERON:0001015!1.33e-13!63;UBERON:0000383!1.33e-13!63;UBERON:0000490!6.50e-13!138;UBERON:0005256!1.07e-12!143;UBERON:0002049!4.35e-12!79;UBERON:0007798!4.35e-12!79;UBERON:0001637!1.38e-10!42;UBERON:0003509!1.38e-10!42;UBERON:0004572!1.38e-10!42;UBERON:0000483!1.54e-10!309;UBERON:0000055!1.87e-10!69;UBERON:0001981!2.44e-10!60;UBERON:0007500!2.44e-10!60;UBERON:0004537!2.44e-10!60;UBERON:0006965!2.44e-10!60;UBERON:0004872!2.61e-10!84;UBERON:0000119!3.27e-10!312;UBERON:0003914!5.38e-10!118;UBERON:0002100!2.36e-09!216;UBERON:0004573!2.88e-07!33;UBERON:0004571!2.88e-07!33;UBERON:0003104!3.08e-07!238;UBERON:0009142!3.08e-07!238;UBERON:0004535!3.18e-07!110;UBERON:0001009!5.05e-07!113 | ||
|ontology_enrichment_uberon_v019=UBERON:0007500;1.22e-07;56!UBERON:0001981;1.22e-07;56!UBERON:0004537;1.22e-07;56!UBERON:0001637;1.49e-07;42!UBERON:0003509;1.49e-07;42!UBERON:0004572;1.49e-07;42!UBERON:0003914;6.53e-07;74 | |||
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| ||
|short_description=p1@TRAPPC2L | |short_description=p1@TRAPPC2L | ||
}} | }} |
Latest revision as of 10:29, 18 September 2015
Short description: | p1@TRAPPC2L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TRAPPC2L_5end |
Coexpression cluster: | NA |
Association with transcript: | 13bp_to_NM_016209, uc002fmc.2, uc002fmd.3, uc002fme.3_5end |
EntrezGene: | TRAPPC2L |
HGNC: | 30887 |
UniProt: | Q9UL33 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 5.94e-26 | 121 |
embryonic cell | 4.06e-20 | 250 |
electrically responsive cell | 1.52e-17 | 61 |
electrically active cell | 1.52e-17 | 61 |
muscle cell | 7.68e-17 | 55 |
muscle precursor cell | 2.03e-16 | 58 |
myoblast | 2.03e-16 | 58 |
multi-potent skeletal muscle stem cell | 2.03e-16 | 58 |
smooth muscle cell | 9.15e-15 | 43 |
smooth muscle myoblast | 9.15e-15 | 43 |
lining cell | 1.26e-10 | 58 |
barrier cell | 1.26e-10 | 58 |
vascular associated smooth muscle cell | 1.29e-10 | 32 |
endothelial cell | 2.86e-09 | 36 |
meso-epithelial cell | 5.65e-09 | 45 |