FFCP PHASE1:Hg19::chr1:209826381..209826392,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:209826381..209826392,- | |||
|coexpression_cluster_id=C226 | |||
|description=CAGE_peak_at_chr1:209826381..209826392,- | |description=CAGE_peak_at_chr1:209826381..209826392,- | ||
|id=chr1:209826381..209826392,- | |id=chr1:209826381..209826392,- | ||
|ontology_enrichment_celltype=CL:0002076!8.20e-37!43;CL:0000066!2.05e-35!254;CL:0000223!3.31e-24!59;CL:0002368!4.31e-17!13;CL:0002251!4.02e-15!21;CL:0002202!2.87e-12!9;CL:0002632!2.87e-12!9;CL:0002159!4.80e-10!13;CL:0000244!7.07e-07!4;CL:0000731!7.07e-07!4 | |ontology_enrichment_celltype=CL:0002076!8.20e-37!43;CL:0000066!2.05e-35!254;CL:0000223!3.31e-24!59;CL:0002368!4.31e-17!13;CL:0002251!4.02e-15!21;CL:0002202!2.87e-12!9;CL:0002632!2.87e-12!9;CL:0002159!4.80e-10!13;CL:0000244!7.07e-07!4;CL:0000731!7.07e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0002368;1.38e-32;13!CL:0002076;1.68e-24;42!CL:0002202;1.35e-21;9!CL:0002632;1.35e-21;9!CL:0002159;4.13e-21;14!CL:0000244;5.07e-14;4!CL:0000731;5.07e-14;4!CL:0002077;3.74e-11;34!CL:0002621;9.27e-11;3!CL:0000307;1.12e-10;3!CL:0002328;2.12e-10;3!CL:0002166;7.33e-10;3!CL:0000240;2.80e-09;6!CL:0000311;2.80e-09;6!CL:0000079;2.80e-09;6!CL:0000237;2.80e-09;6!CL:0000362;5.59e-09;9!CL:0002327;3.32e-08;4!CL:0000575;1.63e-07;2!CL:0000317;3.62e-07;2!CL:1000448;3.62e-07;2!CL:0002308;3.62e-07;2!CL:0002140;3.62e-07;2!CL:0000312;9.64e-07;5!CL:0002251;9.81e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002368,1.00e-32,13;CL:0002076,1.50e-30,42;CL:0000066,1.52e-27,253;CL:0002202,1.52e-21,9;CL:0002632,1.52e-21,9;CL:0002159,3.35e-21,14;CL:0000223,1.80e-20,58;CL:0000244,6.18e-14,4;CL:0000731,6.18e-14,4;CL:0002077,8.04e-13,34;CL:0000068,1.01e-10,3;CL:0000069,1.01e-10,3;CL:0000307,1.01e-10,3;CL:0000377,1.01e-10,3;CL:0002621,1.07e-10,3;CL:0002328,2.03e-10,3;CL:0002166,5.16e-10,3;CL:0000240,2.56e-09,6;CL:0000311,2.56e-09,6;CL:0000079,2.56e-09,6;CL:0000237,2.56e-09,6;CL:0000036,2.56e-09,6;CL:0000357,2.56e-09,6;CL:0000114,2.56e-09,6;CL:0000362,5.70e-09,9;CL:0002327,3.21e-08,4;CL:0002321,9.37e-08,250;CL:0000076,1.38e-07,63;CL:0000575,1.66e-07,2;CL:0000317,4.11e-07,2;CL:1000448,4.11e-07,2;CL:0002308,4.11e-07,2;CL:0002140,4.11e-07,2;CL:0002251,9.01e-07,20;CL:0000312,9.12e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000223;1.05e-11;58!CL:0000377;1.12e-10;3!CL:0000357;2.80e-09;6!CL:0000114;2.80e-09;6 | |||
|ontology_enrichment_disease=DOID:305!5.01e-19!106;DOID:0050687!1.69e-12!143;DOID:1749!2.14e-12!14;DOID:299!4.39e-08!25 | |ontology_enrichment_disease=DOID:305!5.01e-19!106;DOID:0050687!1.69e-12!143;DOID:1749!2.14e-12!14;DOID:299!4.39e-08!25 | ||
|ontology_enrichment_disease_v019=DOID:1749;1.93e-09;14!DOID:3910;7.78e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.60e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0004119!9.84e-23!169;UBERON:0000925!9.84e-23!169;UBERON:0006595!9.84e-23!169;UBERON:0001004!3.34e-21!72;UBERON:0000065!1.43e-16!53;UBERON:0001007!2.85e-16!155;UBERON:0001555!2.85e-16!155;UBERON:0007026!2.85e-16!155;UBERON:0004921!8.01e-15!129;UBERON:0004185!8.01e-15!129;UBERON:0000077!4.49e-13!130;UBERON:0008947!6.29e-13!38;UBERON:0003258!6.29e-13!38;UBERON:0005153!6.51e-12!37;UBERON:0001041!1.47e-11!98;UBERON:0005911!1.48e-11!82;UBERON:0000072!2.80e-11!46;UBERON:0000161!4.12e-11!35;UBERON:0005157!2.52e-10!51;UBERON:0006554!6.31e-10!44;UBERON:0001008!1.50e-09!45;UBERON:0000166!1.67e-09!21;UBERON:0005178!1.71e-09!34;UBERON:0002224!1.71e-09!34;UBERON:0000464!1.76e-09!104;UBERON:0005181!4.68e-09!35;UBERON:0000062!6.39e-09!511;UBERON:0000466!1.80e-08!126;UBERON:0005910!1.80e-08!6;UBERON:0007196!2.35e-08!14;UBERON:0001558!2.35e-08!14;UBERON:0000923!3.02e-08!604;UBERON:0005291!3.02e-08!604;UBERON:0006598!3.02e-08!604;UBERON:0002532!3.02e-08!604;UBERON:0002050!3.58e-08!605;UBERON:0005423!3.58e-08!605;UBERON:0000344!4.62e-08!12;UBERON:0000922!4.92e-08!612;UBERON:0000365!9.57e-08!5;UBERON:0002048!1.56e-07!22;UBERON:0000117!1.56e-07!22;UBERON:0000171!1.56e-07!22;UBERON:0000170!1.56e-07!22;UBERON:0005597!1.56e-07!22;UBERON:0000118!1.56e-07!22;UBERON:0000165!2.61e-07!28;UBERON:0000930!2.61e-07!28;UBERON:0000058!2.92e-07!26;UBERON:0000064!8.14e-07!219;UBERON:0000467!9.21e-07!625;UBERON:0005156!9.26e-07!59;UBERON:0000990!9.26e-07!59 | |ontology_enrichment_uberon=UBERON:0004119!9.84e-23!169;UBERON:0000925!9.84e-23!169;UBERON:0006595!9.84e-23!169;UBERON:0001004!3.34e-21!72;UBERON:0000065!1.43e-16!53;UBERON:0001007!2.85e-16!155;UBERON:0001555!2.85e-16!155;UBERON:0007026!2.85e-16!155;UBERON:0004921!8.01e-15!129;UBERON:0004185!8.01e-15!129;UBERON:0000077!4.49e-13!130;UBERON:0008947!6.29e-13!38;UBERON:0003258!6.29e-13!38;UBERON:0005153!6.51e-12!37;UBERON:0001041!1.47e-11!98;UBERON:0005911!1.48e-11!82;UBERON:0000072!2.80e-11!46;UBERON:0000161!4.12e-11!35;UBERON:0005157!2.52e-10!51;UBERON:0006554!6.31e-10!44;UBERON:0001008!1.50e-09!45;UBERON:0000166!1.67e-09!21;UBERON:0005178!1.71e-09!34;UBERON:0002224!1.71e-09!34;UBERON:0000464!1.76e-09!104;UBERON:0005181!4.68e-09!35;UBERON:0000062!6.39e-09!511;UBERON:0000466!1.80e-08!126;UBERON:0005910!1.80e-08!6;UBERON:0007196!2.35e-08!14;UBERON:0001558!2.35e-08!14;UBERON:0000923!3.02e-08!604;UBERON:0005291!3.02e-08!604;UBERON:0006598!3.02e-08!604;UBERON:0002532!3.02e-08!604;UBERON:0002050!3.58e-08!605;UBERON:0005423!3.58e-08!605;UBERON:0000344!4.62e-08!12;UBERON:0000922!4.92e-08!612;UBERON:0000365!9.57e-08!5;UBERON:0002048!1.56e-07!22;UBERON:0000117!1.56e-07!22;UBERON:0000171!1.56e-07!22;UBERON:0000170!1.56e-07!22;UBERON:0005597!1.56e-07!22;UBERON:0000118!1.56e-07!22;UBERON:0000165!2.61e-07!28;UBERON:0000930!2.61e-07!28;UBERON:0000058!2.92e-07!26;UBERON:0000064!8.14e-07!219;UBERON:0000467!9.21e-07!625;UBERON:0005156!9.26e-07!59;UBERON:0000990!9.26e-07!59 | ||
|ontology_enrichment_uberon_v019=UBERON:0000486;6.05e-13;12!UBERON:0007196;2.29e-12;15!UBERON:0001558;2.29e-12;15!UBERON:0000365;3.30e-11;5!UBERON:0001949;9.27e-11;3!UBERON:0004815;2.12e-10;3!UBERON:0002031;2.12e-10;3!UBERON:0004807;3.71e-10;22!UBERON:0005911;1.11e-09;36!UBERON:0005910;2.50e-09;6!UBERON:0001911;3.32e-08;4!UBERON:0003729;3.62e-08;13!UBERON:0001708;1.72e-07;4!UBERON:0008895;1.72e-07;4!UBERON:0002419;3.62e-07;2!UBERON:0007771;3.62e-07;2!UBERON:0003297;3.62e-07;2!UBERON:0001821;3.62e-07;2!UBERON:0003487;3.62e-07;2!UBERON:0001820;3.62e-07;2!UBERON:0005178;3.68e-07;34!UBERON:0002224;3.68e-07;34!UBERON:0000058;5.55e-07;10!UBERON:0004903;7.78e-07;2!UBERON:0002173;7.78e-07;2!UBERON:0002186;7.78e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007196,2.45e-12,15;UBERON:0001558,2.45e-12,15;UBERON:0000365,3.85e-11,5;UBERON:0001949,1.07e-10,3;UBERON:0004815,2.03e-10,3;UBERON:0002031,2.03e-10,3;UBERON:0005157,5.80e-10,47;UBERON:0004119,8.67e-10,160;UBERON:0000925,8.67e-10,160;UBERON:0006595,8.67e-10,160;UBERON:0005153,1.05e-09,37;UBERON:0001004,2.69e-09,74;UBERON:0005910,2.84e-09,6;UBERON:0005911,4.85e-09,82;UBERON:0001911,3.21e-08,4;UBERON:0005333,3.21e-08,4;UBERON:0008425,3.21e-08,4;UBERON:0005311,3.21e-08,4;UBERON:0003729,3.26e-08,13;UBERON:0001708,1.33e-07,4;UBERON:0008895,1.33e-07,4;UBERON:0004807,1.50e-07,28;UBERON:0005178,2.47e-07,34;UBERON:0002224,2.47e-07,34;UBERON:0002419,4.11e-07,2;UBERON:0007771,4.11e-07,2;UBERON:0003297,4.11e-07,2;UBERON:0001821,4.11e-07,2;UBERON:0003487,4.11e-07,2;UBERON:0001820,4.11e-07,2;UBERON:0005089,4.11e-07,2;UBERON:0005088,4.11e-07,2;UBERON:0005181,4.55e-07,35;UBERON:0000065,5.83e-07,54;UBERON:0003102,7.64e-07,99 | |||
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| ||
|short_description=p@chr1:209826381..209826392,- | |short_description=p@chr1:209826381..209826392,- | ||
}} | }} |
Latest revision as of 03:21, 28 July 2015
Short description: | p@chr1:209826381..209826392, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:209826381..209826392, - |
Coexpression cluster: | C226_Corneal_Keratinocyte_Esophageal_Urothelial_Mammary_Bronchial_Tracheal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
tracheobronchial tree | 2.45e-12 | 15 |
lower respiratory tract | 2.45e-12 | 15 |
urothelium | 3.85e-11 | 5 |
gingival epithelium | 1.07e-10 | 3 |
lower respiratory tract epithelium | 2.03e-10 | 3 |
epithelium of bronchus | 2.03e-10 | 3 |
epithelial fold | 5.80e-10 | 47 |
endoderm-derived structure | 8.67e-10 | 160 |
endoderm | 8.67e-10 | 160 |
presumptive endoderm | 8.67e-10 | 160 |
epithelial bud | 1.05e-09 | 37 |
respiratory system | 2.69e-09 | 74 |
transitional epithelium | 2.84e-09 | 6 |
endo-epithelium | 4.85e-09 | 82 |
mammary gland | 3.21e-08 | 4 |
mammary bud | 3.21e-08 | 4 |
mammary ridge | 3.21e-08 | 4 |
mammary placode | 3.21e-08 | 4 |
mouth mucosa | 3.26e-08 | 13 |
jaw skeleton | 1.33e-07 | 4 |
splanchnocranium | 1.33e-07 | 4 |
respiratory system epithelium | 1.50e-07 | 28 |
thoracic cavity element | 2.47e-07 | 34 |
thoracic cavity | 2.47e-07 | 34 |
skin gland | 4.11e-07 | 2 |
epidermis gland | 4.11e-07 | 2 |
gland of integumental system | 4.11e-07 | 2 |
sebaceous gland | 4.11e-07 | 2 |
skin sebaceous gland | 4.11e-07 | 2 |
sweat gland | 4.11e-07 | 2 |
sweat gland placode | 4.11e-07 | 2 |
sebaceous gland placode | 4.11e-07 | 2 |
thoracic segment organ | 4.55e-07 | 35 |
respiratory tract | 5.83e-07 | 54 |
surface structure | 7.64e-07 | 99 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.60e-09 | 14 |