FFCP PHASE1:Hg19::chr1:24239893..24239910,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1269 | |EntrezGene=1269 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2160 | |HGNC=2160 | ||
|TSSclassifier=strong | |||
|UniProt=P34972 | |UniProt=P34972 | ||
|association_with_transcript=-41bp_to_ENST00000374472_5end | |association_with_transcript=-41bp_to_ENST00000374472_5end | ||
|cluster_id=chr1:24239893..24239910,- | |||
|description=CAGE_peak_2_at_CNR2_5end | |description=CAGE_peak_2_at_CNR2_5end | ||
|id=chr1:24239893..24239910,- | |id=chr1:24239893..24239910,- | ||
|ontology_enrichment_celltype=CL:0000037!6.15e-61!172;CL:0000566!6.15e-61!172;CL:0000988!4.45e-56!182;CL:0002032!2.59e-55!165;CL:0000837!2.59e-55!165;CL:0000738!3.02e-43!140;CL:0002087!1.33e-33!119;CL:0002031!6.59e-32!124;CL:0000542!1.35e-29!53;CL:0000051!1.35e-29!53;CL:0000945!9.17e-29!24;CL:0000826!9.17e-29!24;CL:0000838!2.78e-28!52;CL:0000763!3.98e-25!112;CL:0000049!3.98e-25!112;CL:0000236!1.40e-18!14;CL:0000134!3.95e-16!358;CL:0002320!2.44e-15!365;CL:0000219!1.39e-12!390;CL:0000766!3.85e-11!76;CL:0000048!2.23e-09!430;CL:0000723!6.20e-09!436;CL:0002057!6.52e-09!42;CL:0000839!1.01e-08!70;CL:0000034!2.30e-08!444;CL:0000860!5.53e-08!45;CL:0000094!3.24e-07!8;CL:0000557!6.86e-07!71;CL:0002194!8.99e-07!63;CL:0000576!8.99e-07!63;CL:0000040!8.99e-07!63;CL:0000559!8.99e-07!63 | |ontology_enrichment_celltype=CL:0000037!6.15e-61!172;CL:0000566!6.15e-61!172;CL:0000988!4.45e-56!182;CL:0002032!2.59e-55!165;CL:0000837!2.59e-55!165;CL:0000738!3.02e-43!140;CL:0002087!1.33e-33!119;CL:0002031!6.59e-32!124;CL:0000542!1.35e-29!53;CL:0000051!1.35e-29!53;CL:0000945!9.17e-29!24;CL:0000826!9.17e-29!24;CL:0000838!2.78e-28!52;CL:0000763!3.98e-25!112;CL:0000049!3.98e-25!112;CL:0000236!1.40e-18!14;CL:0000134!3.95e-16!358;CL:0002320!2.44e-15!365;CL:0000219!1.39e-12!390;CL:0000766!3.85e-11!76;CL:0000048!2.23e-09!430;CL:0000723!6.20e-09!436;CL:0002057!6.52e-09!42;CL:0000839!1.01e-08!70;CL:0000034!2.30e-08!444;CL:0000860!5.53e-08!45;CL:0000094!3.24e-07!8;CL:0000557!6.86e-07!71;CL:0002194!8.99e-07!63;CL:0000576!8.99e-07!63;CL:0000040!8.99e-07!63;CL:0000559!8.99e-07!63 | ||
|ontology_enrichment_celltype_v019=CL:0000945;1.53e-36;24!CL:0000236;4.21e-26;13!CL:0000542;5.31e-15;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.35e-36,24;CL:0000826,1.35e-36,24;CL:0002032,4.71e-33,161;CL:0000837,4.71e-33,161;CL:0000037,3.40e-31,168;CL:0000236,3.60e-29,14;CL:0000988,5.08e-29,177;CL:0000542,1.69e-24,53;CL:0000051,1.69e-24,53;CL:0000838,1.16e-22,52;CL:0000738,2.97e-17,136;CL:0002031,4.40e-15,120;CL:0002087,1.04e-14,115;CL:0000763,1.03e-11,108;CL:0000049,1.03e-11,108;CL:0000134,7.67e-09,354;CL:0002320,1.85e-08,361;CL:0000785,1.17e-07,2;CL:0000955,1.17e-07,2;CL:0000818,1.17e-07,2;CL:0000954,1.17e-07,2;CL:0000816,1.17e-07,2;CL:0000219,4.00e-07,386 | |||
|ontology_enrichment_development_v019=CL:0000051;5.31e-15;53!CL:0000954;1.02e-07;2!UBERON:0004872;7.39e-07;7 | |||
|ontology_enrichment_disease=DOID:2531!1.65e-19!51;DOID:0060083!1.65e-19!51;DOID:1240!2.76e-15!39;DOID:8692!4.73e-13!31;DOID:0060058!6.31e-07!10 | |ontology_enrichment_disease=DOID:2531!1.65e-19!51;DOID:0060083!1.65e-19!51;DOID:1240!2.76e-15!39;DOID:8692!4.73e-13!31;DOID:0060058!6.31e-07!10 | ||
|ontology_enrichment_disease_v019=DOID:2531;2.47e-14;51!DOID:0060083;2.47e-14;51!DOID:1240;3.13e-14;39!DOID:8692;4.87e-14;31 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,5.15e-22,51;DOID:0060083,5.15e-22,51;DOID:1240,1.53e-19,39;DOID:8692,1.42e-14,31 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.47e-15!102;UBERON:0003061!1.47e-15!102;UBERON:0002193!5.93e-15!112;UBERON:0002384!2.89e-14!375;UBERON:0000178!1.25e-11!15;UBERON:0000179!1.25e-11!15;UBERON:0000463!1.25e-11!15;UBERON:0004177!3.43e-08!7 | |ontology_enrichment_uberon=UBERON:0002390!1.47e-15!102;UBERON:0003061!1.47e-15!102;UBERON:0002193!5.93e-15!112;UBERON:0002384!2.89e-14!375;UBERON:0000178!1.25e-11!15;UBERON:0000179!1.25e-11!15;UBERON:0000463!1.25e-11!15;UBERON:0004177!3.43e-08!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.30e-12;15!UBERON:0000179;1.30e-12;15!UBERON:0000463;1.30e-12;15!UBERON:0002106;2.18e-09;3!UBERON:0002390;4.14e-09;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.28e-12,15;UBERON:0000179,1.28e-12,15;UBERON:0000463,1.28e-12,15;UBERON:0002106,1.83e-09,3;UBERON:0004854,1.83e-09,3;UBERON:0009034,1.83e-09,3;UBERON:0002095,1.83e-09,3;UBERON:0004782,1.83e-09,3;UBERON:0003281,1.83e-09,3;UBERON:0009664,1.83e-09,3;UBERON:0002296,1.83e-09,3;UBERON:0005602,1.83e-09,3;UBERON:0001179,1.83e-09,3;UBERON:0006293,1.83e-09,3;UBERON:0002384,6.11e-08,371;UBERON:0004177,3.03e-07,7;UBERON:0005057,3.03e-07,7;UBERON:0002390,7.28e-07,98;UBERON:0003061,7.28e-07,98 | |||
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|short_description=p2@CNR2 | |short_description=p2@CNR2 | ||
}} | }} |
Latest revision as of 18:48, 16 September 2015
Short description: | p2@CNR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CNR2_5end |
Coexpression cluster: | NA |
Association with transcript: | -41bp_to_ENST00000374472_5end |
EntrezGene: | CNR2 |
HGNC: | 2160 |
UniProt: | P34972 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.35e-36 | 24 |
pro-B cell | 1.35e-36 | 24 |
hematopoietic oligopotent progenitor cell | 4.71e-33 | 161 |
hematopoietic multipotent progenitor cell | 4.71e-33 | 161 |
hematopoietic stem cell | 3.40e-31 | 168 |
B cell | 3.60e-29 | 14 |
hematopoietic cell | 5.08e-29 | 177 |
lymphocyte | 1.69e-24 | 53 |
common lymphoid progenitor | 1.69e-24 | 53 |
lymphoid lineage restricted progenitor cell | 1.16e-22 | 52 |
leukocyte | 2.97e-17 | 136 |
hematopoietic lineage restricted progenitor cell | 4.40e-15 | 120 |
nongranular leukocyte | 1.04e-14 | 115 |
myeloid cell | 1.03e-11 | 108 |
common myeloid progenitor | 1.03e-11 | 108 |
mesenchymal cell | 7.67e-09 | 354 |
connective tissue cell | 1.85e-08 | 361 |
mature B cell | 1.17e-07 | 2 |
pre-B-II cell | 1.17e-07 | 2 |
transitional stage B cell | 1.17e-07 | 2 |
small pre-B-II cell | 1.17e-07 | 2 |
immature B cell | 1.17e-07 | 2 |
motile cell | 4.00e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
blood | 1.28e-12 | 15 |
haemolymphatic fluid | 1.28e-12 | 15 |
organism substance | 1.28e-12 | 15 |
spleen | 1.83e-09 | 3 |
gastrointestinal system mesentery | 1.83e-09 | 3 |
stomach region | 1.83e-09 | 3 |
mesentery | 1.83e-09 | 3 |
gastrointestinal system serosa | 1.83e-09 | 3 |
mesentery of stomach | 1.83e-09 | 3 |
gut mesentery | 1.83e-09 | 3 |
dorsal mesentery | 1.83e-09 | 3 |
dorsal mesogastrium | 1.83e-09 | 3 |
peritoneal cavity | 1.83e-09 | 3 |
spleen primordium | 1.83e-09 | 3 |
connective tissue | 6.11e-08 | 371 |
hemopoietic organ | 3.03e-07 | 7 |
immune organ | 3.03e-07 | 7 |
hematopoietic system | 7.28e-07 | 98 |
blood island | 7.28e-07 | 98 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 5.15e-22 | 51 |
immune system cancer | 5.15e-22 | 51 |
leukemia | 1.53e-19 | 39 |
myeloid leukemia | 1.42e-14 | 31 |