FFCP PHASE1:Hg19::chr10:124254461..124254476,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:124254461..124254476,- | |||
|description=CAGE_peak_at_chr10:124254461..124254476,- | |description=CAGE_peak_at_chr10:124254461..124254476,- | ||
|id=chr10:124254461..124254476,- | |id=chr10:124254461..124254476,- | ||
|ontology_enrichment_celltype=CL:0000057!4.62e-20!75;CL:0002620!4.02e-16!23;CL:0000548!5.38e-14!679;CL:0000004!5.38e-14!679;CL:0000255!5.38e-14!679;CL:0000055!9.21e-14!180;CL:0000012!1.03e-13!682;CL:0002371!6.39e-11!591;CL:0000144!8.46e-11!625;CL:0000003!1.08e-10!722;CL:0002551!1.61e-08!6;CL:0000220!2.81e-08!246;CL:0002139!3.47e-08!24;CL:0002543!4.26e-08!6;CL:0002321!4.66e-08!248;CL:0000222!3.71e-07!119;CL:0000063!9.94e-07!578 | |ontology_enrichment_celltype=CL:0000057!4.62e-20!75;CL:0002620!4.02e-16!23;CL:0000548!5.38e-14!679;CL:0000004!5.38e-14!679;CL:0000255!5.38e-14!679;CL:0000055!9.21e-14!180;CL:0000012!1.03e-13!682;CL:0002371!6.39e-11!591;CL:0000144!8.46e-11!625;CL:0000003!1.08e-10!722;CL:0002551!1.61e-08!6;CL:0000220!2.81e-08!246;CL:0002139!3.47e-08!24;CL:0002543!4.26e-08!6;CL:0002321!4.66e-08!248;CL:0000222!3.71e-07!119;CL:0000063!9.94e-07!578 | ||
|ontology_enrichment_celltype_v019=CL:0002620;1.37e-13;23!CL:0002551;2.70e-13;6!CL:0002543;2.56e-12;6!CL:0002618;4.97e-10;3!CL:0000708;1.04e-09;3!CL:0002504;1.44e-09;3!CL:1000279;1.44e-09;3!CL:0002590;1.44e-09;3!CL:1000280;1.44e-09;3!CL:0002621;2.15e-09;3!CL:0002139;2.47e-08;24!CL:0000115;6.27e-08;36!CL:0002554;2.22e-07;2!CL:0000071;3.97e-07;18!CL:0002367;5.83e-07;2!CL:0000057;6.73e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.58e-14,76;CL:0002620,7.30e-14,23;CL:0002551,1.95e-13,6;CL:0002543,2.46e-12,6;CL:0002618,5.99e-10,3;CL:0002590,1.00e-09,3;CL:0000708,1.03e-09,3;CL:0002504,1.61e-09,3;CL:1000279,1.61e-09,3;CL:1000280,1.61e-09,3;CL:0002621,2.42e-09,3;CL:0000115,2.85e-09,36;CL:0000222,1.01e-08,121;CL:0002139,2.58e-08,24;CL:0002554,1.74e-07,2;CL:0000071,4.21e-07,18;CL:0002546,4.21e-07,18;CL:0002367,5.10e-07,2;CL:0002078,6.52e-07,45 | |||
|ontology_enrichment_development_v019=CL:0002546;3.97e-07;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002200!2.86e-10!11;UBERON:0006876!2.86e-10!11;UBERON:0003102!9.52e-10!95;UBERON:0002097!1.63e-09!40;UBERON:0000914!5.04e-08!83;UBERON:0002329!5.04e-08!83;UBERON:0003077!5.04e-08!83;UBERON:0003059!5.04e-08!83;UBERON:0007282!5.04e-08!83;UBERON:0009618!5.04e-08!83;UBERON:0007285!5.04e-08!83;UBERON:0001444!5.57e-08!48;UBERON:0001737!7.36e-08!9;UBERON:0002199!1.00e-07!45;UBERON:0002416!1.00e-07!45;UBERON:0001638!1.08e-07!9;UBERON:0003920!1.08e-07!9;UBERON:0004582!1.08e-07!9;UBERON:0002067!5.18e-07!9;UBERON:0004016!5.18e-07!9;UBERON:0010083!5.18e-07!9;UBERON:0005284!8.39e-07!5 | |ontology_enrichment_uberon=UBERON:0002200!2.86e-10!11;UBERON:0006876!2.86e-10!11;UBERON:0003102!9.52e-10!95;UBERON:0002097!1.63e-09!40;UBERON:0000914!5.04e-08!83;UBERON:0002329!5.04e-08!83;UBERON:0003077!5.04e-08!83;UBERON:0003059!5.04e-08!83;UBERON:0007282!5.04e-08!83;UBERON:0009618!5.04e-08!83;UBERON:0007285!5.04e-08!83;UBERON:0001444!5.57e-08!48;UBERON:0001737!7.36e-08!9;UBERON:0002199!1.00e-07!45;UBERON:0002416!1.00e-07!45;UBERON:0001638!1.08e-07!9;UBERON:0003920!1.08e-07!9;UBERON:0004582!1.08e-07!9;UBERON:0002067!5.18e-07!9;UBERON:0004016!5.18e-07!9;UBERON:0010083!5.18e-07!9;UBERON:0005284!8.39e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0001828;1.69e-13;8!UBERON:0002067;4.94e-12;9!UBERON:0003210;1.04e-09;3!UBERON:0005284;1.35e-09;5!UBERON:0001949;2.15e-09;3!UBERON:0006876;4.26e-09;11!UBERON:0001638;4.30e-08;9!UBERON:0003920;4.30e-08;9!UBERON:0004582;4.30e-08;9!UBERON:0003729;5.16e-08;13!UBERON:0000165;1.68e-07;28!UBERON:0002097;2.19e-07;41!UBERON:0004638;3.97e-07;18!UBERON:0001986;3.97e-07;18!UBERON:0004852;3.97e-07;18!UBERON:0011137;5.72e-07;11!UBERON:0010323;5.72e-07;11!UBERON:0005969;5.83e-07;2!UBERON:0003956;5.83e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001828,1.76e-13,8;UBERON:0003102,7.23e-13,99;UBERON:0002067,3.82e-12,9;UBERON:0004016,3.82e-12,9;UBERON:0010083,3.82e-12,9;UBERON:0003210,1.03e-09,3;UBERON:0005284,1.13e-09,5;UBERON:0002097,1.20e-09,41;UBERON:0001949,2.42e-09,3;UBERON:0006876,3.54e-09,11;UBERON:0000486,3.61e-09,83;UBERON:0000033,9.86e-09,56;UBERON:0002199,2.78e-08,46;UBERON:0002416,2.78e-08,46;UBERON:0001638,4.19e-08,9;UBERON:0003920,4.19e-08,9;UBERON:0004582,4.19e-08,9;UBERON:0003729,5.28e-08,13;UBERON:0007503,6.40e-08,78;UBERON:0002329,6.48e-08,71;UBERON:0003059,6.48e-08,71;UBERON:0007282,6.48e-08,71;UBERON:0004290,6.48e-08,71;UBERON:0009618,6.48e-08,71;UBERON:0002049,7.95e-08,78;UBERON:0007798,7.95e-08,78;UBERON:0003077,9.43e-08,72;UBERON:0007285,9.43e-08,72;UBERON:0001444,9.49e-08,49;UBERON:0007524,1.36e-07,73;UBERON:0000153,1.48e-07,62;UBERON:0007811,1.48e-07,62;UBERON:0000165,3.44e-07,29;UBERON:0000930,3.44e-07,29;UBERON:0004638,4.21e-07,18;UBERON:0001986,4.21e-07,18;UBERON:0004852,4.21e-07,18;UBERON:0005969,5.10e-07,2;UBERON:0003956,5.10e-07,2;UBERON:0010323,6.41e-07,11 | |||
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|short_description=p@chr10:124254461..124254476,- | |short_description=p@chr10:124254461..124254476,- | ||
}} | }} |
Latest revision as of 11:13, 23 July 2015
Short description: | p@chr10:124254461..124254476, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:124254461..124254476, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.58e-14 | 76 |
skin fibroblast | 7.30e-14 | 23 |
fibroblast of dermis | 1.95e-13 | 6 |
vein endothelial cell | 2.46e-12 | 6 |
endothelial cell of umbilical vein | 5.99e-10 | 3 |
smooth muscle cell of the brain vasculature | 1.00e-09 | 3 |
leptomeningeal cell | 1.03e-09 | 3 |
enteric smooth muscle cell | 1.61e-09 | 3 |
smooth muscle cell of large intestine | 1.61e-09 | 3 |
smooth muscle cell of colon | 1.61e-09 | 3 |
gingival epithelial cell | 2.42e-09 | 3 |
endothelial cell | 2.85e-09 | 36 |
mesodermal cell | 1.01e-08 | 121 |
endothelial cell of vascular tree | 2.58e-08 | 24 |
fibroblast of lymphatic vessel | 1.74e-07 | 2 |
blood vessel endothelial cell | 4.21e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.21e-07 | 18 |
trabecular meshwork cell | 5.10e-07 | 2 |
meso-epithelial cell | 6.52e-07 | 45 |