FFCP PHASE1:Hg19::chr11:60809729..60809743,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:60809729..60809743,- | |||
|coexpression_cluster_id=C22 | |||
|description=CAGE_peak_at_chr11:60809729..60809743,- | |description=CAGE_peak_at_chr11:60809729..60809743,- | ||
|id=chr11:60809729..60809743,- | |id=chr11:60809729..60809743,- | ||
|ontology_enrichment_celltype=CL:0000838!1.18e-32!52;CL:0000542!7.09e-32!53;CL:0000051!7.09e-32!53;CL:0000084!1.20e-24!25;CL:0000827!1.20e-24!25;CL:0000791!8.30e-21!18;CL:0000789!8.30e-21!18;CL:0002420!8.30e-21!18;CL:0002419!8.30e-21!18;CL:0000790!8.30e-21!18;CL:0000624!4.20e-16!6;CL:0000738!4.55e-15!140;CL:0002087!1.40e-14!119;CL:0000037!4.13e-12!172;CL:0000566!4.13e-12!172;CL:0000988!6.79e-11!182;CL:0002031!1.01e-10!124;CL:0002032!1.16e-09!165;CL:0000837!1.16e-09!165;CL:0000623!4.81e-09!3;CL:0000825!4.81e-09!3;CL:0000898!1.55e-08!3;CL:0000842!1.06e-07!3;CL:0000625!2.66e-07!11 | |ontology_enrichment_celltype=CL:0000838!1.18e-32!52;CL:0000542!7.09e-32!53;CL:0000051!7.09e-32!53;CL:0000084!1.20e-24!25;CL:0000827!1.20e-24!25;CL:0000791!8.30e-21!18;CL:0000789!8.30e-21!18;CL:0002420!8.30e-21!18;CL:0002419!8.30e-21!18;CL:0000790!8.30e-21!18;CL:0000624!4.20e-16!6;CL:0000738!4.55e-15!140;CL:0002087!1.40e-14!119;CL:0000037!4.13e-12!172;CL:0000566!4.13e-12!172;CL:0000988!6.79e-11!182;CL:0002031!1.01e-10!124;CL:0002032!1.16e-09!165;CL:0000837!1.16e-09!165;CL:0000623!4.81e-09!3;CL:0000825!4.81e-09!3;CL:0000898!1.55e-08!3;CL:0000842!1.06e-07!3;CL:0000625!2.66e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000624;8.32e-45;6!CL:0000791;5.70e-33;18!CL:0000789;5.70e-33;18!CL:0002419;5.70e-33;18!CL:0000084;5.27e-32;25!CL:0000623;4.12e-23;3!CL:0000895;5.72e-18;1!CL:0000542;8.95e-15;53!CL:0000625;6.74e-07;11!CL:0000898;7.49e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,8.32e-45,6;CL:0000791,6.03e-33,18;CL:0000789,6.03e-33,18;CL:0002420,6.03e-33,18;CL:0002419,6.03e-33,18;CL:0000790,6.03e-33,18;CL:0000084,5.39e-32,25;CL:0000827,5.39e-32,25;CL:0000838,4.24e-25,52;CL:0000542,1.29e-24,53;CL:0000051,1.29e-24,53;CL:0000623,4.12e-23,3;CL:0000825,4.12e-23,3;CL:0000810,6.23e-18,1;CL:0000895,6.23e-18,1;CL:0002436,6.23e-18,1;CL:0002427,6.23e-18,1;CL:0002428,6.23e-18,1;CL:0002429,6.23e-18,1;CL:0002433,6.23e-18,1;CL:0002431,6.23e-18,1;CL:0002432,6.23e-18,1;CL:0002087,6.87e-11,115;CL:0002031,2.08e-10,120;CL:0000893,1.22e-09,2;CL:0002489,1.22e-09,2;CL:0000809,1.22e-09,2;CL:0000808,1.22e-09,2;CL:0000894,1.22e-09,2;CL:0000806,1.22e-09,2;CL:0000807,1.22e-09,2;CL:0000805,1.22e-09,2;CL:0002425,1.22e-09,2;CL:0000738,4.20e-09,136;CL:0002032,1.42e-07,161;CL:0000837,1.42e-07,161;CL:0000037,3.17e-07,168;CL:0000625,6.94e-07,11;CL:0000898,7.70e-07,3;CL:0000988,8.12e-07,177 | |||
|ontology_enrichment_development_v019=CL:0000790;5.70e-33;18!CL:0002427;5.72e-18;1!CL:0000051;8.95e-15;53!CL:0002425;1.17e-09;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!1.08e-10!4;UBERON:0005058!1.08e-10!4;UBERON:0009113!1.08e-10!4;UBERON:0003295!1.08e-10!4;UBERON:0005562!1.08e-10!4;UBERON:0004177!5.39e-09!7;UBERON:0003351!4.28e-07!6 | |ontology_enrichment_uberon=UBERON:0002370!1.08e-10!4;UBERON:0005058!1.08e-10!4;UBERON:0009113!1.08e-10!4;UBERON:0003295!1.08e-10!4;UBERON:0005562!1.08e-10!4;UBERON:0004177!5.39e-09!7;UBERON:0003351!4.28e-07!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;1.78e-09;2!UBERON:0005058;1.78e-09;2!UBERON:0009113;1.78e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.19e-17,4;UBERON:0005058,2.19e-17,4;UBERON:0009113,2.19e-17,4;UBERON:0003295,2.19e-17,4;UBERON:0005562,2.19e-17,4;UBERON:0003351,6.34e-12,6;UBERON:0004177,2.35e-10,7;UBERON:0005057,2.35e-10,7;UBERON:0000974,1.62e-07,10;UBERON:0003408,1.62e-07,10;UBERON:0001042,1.62e-07,10;UBERON:0009145,1.62e-07,10;UBERON:0006562,6.54e-07,11;UBERON:0009722,6.54e-07,11;UBERON:0007690,6.54e-07,11 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0.305653622991805,0.246301768349837,0.157421562627358,0,0.383829398097213,0.309632246632152,0,0,0,0,0,0,0,0,0.434021741431704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889509253863555,0,0,0,0.661044872784862,0,0.569212969109448,0.587237189370939,0,0,0,0,3.34406609193516,7.07419372948497,10.6912779479745,0,0.651844533267181,0.946895611469467,0,0.334231370655521,0.294605907474837,0,0.270803863765016,0.512365278902701,0.910415432919148,0.493313713811028,0.276350017785848,0,0.593146252648242,0.267540828089713,0,0.226618685395132,3.06576394881537,4.46715679127419,1.77113784413652,0,0,0,0.150575119077773,0.127986611154418,0,0.236777252044017,0,0.201606743224732,2.40696176205157,1.15859523106239,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.310983165046111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.882926198829301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468008530278475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0.788123040807709,4.74380664690938,2.31017465303547,0,0,0,0,0.637938751653163,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.431428401637234,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0.284567373393656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0.281338832821026,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0.511572370226872,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0.364909578431332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31443677139657,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0.213574825135389,0,0,0,0.592834895693833,0,0,0,0,0,0,0.157054096250234,0,0,0.1251909307065,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39997479170986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23658523500376,0,0,0,0,0,0,0,0.504143392443436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0,0.546974809018219,0,0,0,0,0.535701835878287,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0.322289439867886,0,0,0,0,0,0,0,0,0,0.436350690340377,0,0,0,0,0,0,0,0,0,0.275684698604535,0,0,0,0,0,0,0,0.775066918032073,1.30356900021302,0,0,0,0,0,0.0673520530145875,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr11:60809729..60809743,- | |short_description=p@chr11:60809729..60809743,- | ||
}} | }} |
Latest revision as of 23:21, 23 July 2015
Short description: | p@chr11:60809729..60809743, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:60809729..60809743, - |
Coexpression cluster: | C22_CD4_CD8_Natural_Basophils_CD14_Peripheral_CD19 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 2.19e-17 | 4 |
hemolymphoid system gland | 2.19e-17 | 4 |
thymic region | 2.19e-17 | 4 |
pharyngeal gland | 2.19e-17 | 4 |
thymus primordium | 2.19e-17 | 4 |
pharyngeal epithelium | 6.34e-12 | 6 |
hemopoietic organ | 2.35e-10 | 7 |
immune organ | 2.35e-10 | 7 |
neck | 1.62e-07 | 10 |
gland of gut | 1.62e-07 | 10 |
chordate pharynx | 1.62e-07 | 10 |
pharyngeal region of foregut | 1.62e-07 | 10 |
pharynx | 6.54e-07 | 11 |
entire pharyngeal arch endoderm | 6.54e-07 | 11 |
early pharyngeal endoderm | 6.54e-07 | 11 |