FFCP PHASE1:Hg19::chr11:9285728..9285741,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:9285728..9285741,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr11:9285728..9285741,+ | |description=CAGE_peak_at_chr11:9285728..9285741,+ | ||
|id=chr11:9285728..9285741,+ | |id=chr11:9285728..9285741,+ | ||
|ontology_enrichment_celltype=CL:0002057!3.00e-57!42;CL:0000860!4.15e-53!45;CL:0000766!1.69e-45!76;CL:0002194!6.88e-36!63;CL:0000576!6.88e-36!63;CL:0000040!6.88e-36!63;CL:0000559!6.88e-36!63;CL:0000839!4.87e-35!70;CL:0002009!1.19e-34!65;CL:0000557!1.76e-34!71;CL:0000763!1.45e-31!112;CL:0000049!1.45e-31!112;CL:0000738!1.67e-30!140;CL:0000037!1.69e-25!172;CL:0000566!1.69e-25!172;CL:0002087!1.22e-24!119;CL:0000988!9.39e-24!182;CL:0002032!5.06e-23!165;CL:0000837!5.06e-23!165;CL:0002031!2.23e-21!124;CL:0000771!3.18e-12!2;CL:0000094!2.40e-11!8;CL:0000134!8.90e-10!358;CL:0002320!1.84e-09!365;CL:0000219!2.38e-08!390;CL:0000775!2.39e-08!3;CL:0000081!2.88e-08!11;CL:0000842!4.25e-08!3;CL:0000048!9.26e-08!430;CL:0000723!1.47e-07!436;CL:0000034!2.68e-07!444 | |ontology_enrichment_celltype=CL:0002057!3.00e-57!42;CL:0000860!4.15e-53!45;CL:0000766!1.69e-45!76;CL:0002194!6.88e-36!63;CL:0000576!6.88e-36!63;CL:0000040!6.88e-36!63;CL:0000559!6.88e-36!63;CL:0000839!4.87e-35!70;CL:0002009!1.19e-34!65;CL:0000557!1.76e-34!71;CL:0000763!1.45e-31!112;CL:0000049!1.45e-31!112;CL:0000738!1.67e-30!140;CL:0000037!1.69e-25!172;CL:0000566!1.69e-25!172;CL:0002087!1.22e-24!119;CL:0000988!9.39e-24!182;CL:0002032!5.06e-23!165;CL:0000837!5.06e-23!165;CL:0002031!2.23e-21!124;CL:0000771!3.18e-12!2;CL:0000094!2.40e-11!8;CL:0000134!8.90e-10!358;CL:0002320!1.84e-09!365;CL:0000219!2.38e-08!390;CL:0000775!2.39e-08!3;CL:0000081!2.88e-08!11;CL:0000842!4.25e-08!3;CL:0000048!9.26e-08!430;CL:0000723!1.47e-07!436;CL:0000034!2.68e-07!444 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.56e-40;33!CL:0002057;4.56e-40;33!CL:0000473;9.04e-28;39!CL:0000234;9.04e-28;39!CL:0000576;1.09e-26;48!CL:0000766;1.51e-23;69!CL:0000771;1.80e-19;2!CL:0000094;1.28e-18;8!CL:0002087;3.75e-14;104!CL:0002393;7.54e-14;6!CL:0002397;7.54e-14;6!CL:0000081;1.31e-13;11!CL:0000775;3.57e-13;3!CL:0000763;6.37e-13;100!CL:0000226;9.42e-13;3!CL:0000842;9.42e-13;3!CL:0000738;1.11e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.23e-52,42;CL:0002057,1.23e-52,42;CL:0000766,8.08e-47,72;CL:0000473,9.42e-46,48;CL:0000234,9.42e-46,48;CL:0002194,4.15e-36,59;CL:0000576,4.15e-36,59;CL:0000040,4.15e-36,59;CL:0000559,4.15e-36,59;CL:0002009,7.31e-35,61;CL:0000839,4.49e-32,66;CL:0000557,1.45e-31,67;CL:0000763,2.06e-30,108;CL:0000049,2.06e-30,108;CL:0000738,5.04e-29,136;CL:0000037,5.84e-23,168;CL:0002087,1.89e-22,115;CL:0000988,1.21e-21,177;CL:0002032,1.71e-19,161;CL:0000837,1.71e-19,161;CL:0000771,1.80e-19,2;CL:0000094,1.28e-18,8;CL:0002031,1.32e-16,120;CL:0000081,1.31e-13,11;CL:0000775,3.57e-13,3;CL:0000226,9.42e-13,3;CL:0000842,9.42e-13,3;CL:0002393,2.19e-09,9;CL:0002397,2.19e-09,9;CL:0000134,2.93e-09,354;CL:0002320,5.13e-09,361;CL:0000219,3.71e-08,386;CL:0000048,4.21e-07,427;CL:0000723,5.89e-07,433;CL:0000034,9.09e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;5.50e-36;42!CL:0000049;3.85e-07;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!4.40e-30!80;UBERON:0001474!1.17e-27!86;UBERON:0002390!3.22e-27!102;UBERON:0003061!3.22e-27!102;UBERON:0002193!2.51e-24!112;UBERON:0004765!7.69e-23!101;UBERON:0001434!7.69e-23!101;UBERON:0002405!1.81e-19!115;UBERON:0002204!3.60e-13!167;UBERON:0003081!3.89e-11!216;UBERON:0002384!4.96e-09!375 | |ontology_enrichment_uberon=UBERON:0002371!4.40e-30!80;UBERON:0001474!1.17e-27!86;UBERON:0002390!3.22e-27!102;UBERON:0003061!3.22e-27!102;UBERON:0002193!2.51e-24!112;UBERON:0004765!7.69e-23!101;UBERON:0001434!7.69e-23!101;UBERON:0002405!1.81e-19!115;UBERON:0002204!3.60e-13!167;UBERON:0003081!3.89e-11!216;UBERON:0002384!4.96e-09!375 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.40e-27,76;UBERON:0002390,8.73e-27,98;UBERON:0003061,8.73e-27,98;UBERON:0001474,2.11e-25,82;UBERON:0002193,4.52e-24,108;UBERON:0004765,6.08e-23,90;UBERON:0002405,3.97e-22,93;UBERON:0001434,2.05e-20,100;UBERON:0003081,1.63e-11,203;UBERON:0002204,3.25e-11,167;UBERON:0002384,1.10e-08,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10799081706375,1.00272223735071,1.95309783644267,0,0,0,0,0,0,0.232429036905685,0,0.309706370895104,3.16461631554365,0,1.41889337933151,22.7532149286168,1.93645405075148,17.6054432572644,0,0,0.224723484445085,31.2205570218321,3.85114832491312,37.7208904221434,0,0,0,8.70627715885752,0.56738522469114,6.85104473895132,0,0,0.217188844705117,4.84319602106695,1.47311054395026,6.0127853613768,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.27121669744253,7.75560528296651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256686072559497,0,0,0,0,0,3.74503511973591,0,6.63064821497657,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2942852049117,1.60091336705167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10799081706375,1.00272223735071,1.95309783644267,0,0,0,0,0,0,0.232429036905685,0,0.309706370895104,3.16461631554365,0,1.41889337933151,22.7532149286168,1.93645405075148,17.6054432572644,0,0,0.224723484445085,31.2205570218321,3.85114832491312,37.7208904221434,0,0,0,8.70627715885752,0.56738522469114,6.85104473895132,0,0,0.217188844705117,4.84319602106695,1.47311054395026,6.0127853613768,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.27121669744253,7.75560528296651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256686072559497,0,0,0,0,0,3.74503511973591,0,6.63064821497657,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2942852049117,1.60091336705167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr11:9285728..9285741,+ | |short_description=p@chr11:9285728..9285741,+ | ||
}} | }} |
Latest revision as of 03:31, 24 July 2015
Short description: | p@chr11:9285728..9285741, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:9285728..9285741, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.40e-27 | 76 |
hematopoietic system | 8.73e-27 | 98 |
blood island | 8.73e-27 | 98 |
bone element | 2.11e-25 | 82 |
hemolymphoid system | 4.52e-24 | 108 |
skeletal element | 6.08e-23 | 90 |
immune system | 3.97e-22 | 93 |
skeletal system | 2.05e-20 | 100 |
lateral plate mesoderm | 1.63e-11 | 203 |
musculoskeletal system | 3.25e-11 | 167 |
connective tissue | 1.10e-08 | 371 |