FFCP PHASE1:Hg19::chr17:46671154..46671167,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr17:46671154..46671167,-
|short_description=p4@HOXB5
|description=CAGE_peak_4_at_HOXB5_5end
|association_with_transcript=-51bp_to_NM_002147,uc002inr.2_5end
|...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3215 | |EntrezGene=3215 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5116 | |HGNC=5116 | ||
|TSSclassifier=strong | |||
|UniProt=P09067 | |UniProt=P09067 | ||
|association_with_transcript=-51bp_to_NM_002147,uc002inr.2_5end | |||
|cluster_id=chr17:46671154..46671167,- | |||
|description=CAGE_peak_4_at_HOXB5_5end | |||
|id=chr17:46671154..46671167,- | |||
|ontology_enrichment_celltype=CL:1000497!5.23e-08!18;CL:0002518!5.23e-08!18;CL:0002334!1.10e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0002600;2.08e-21;2!CL:0002598;3.46e-21;2!CL:0000192;6.13e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0002598,2.08e-21,2;CL:0002600,2.31e-21,2;CL:0000192,4.22e-08,43;CL:0000514,4.22e-08,43 | |||
|ontology_enrichment_development_v019=CL:0000514;6.13e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000489!6.30e-09!32;UBERON:0003076!2.57e-08!15;UBERON:0003057!2.57e-08!15;UBERON:0000353!3.83e-07!17;UBERON:0006555!5.39e-07!17;UBERON:0005103!5.39e-07!17;UBERON:0000083!5.39e-07!17;UBERON:0009201!5.39e-07!17;UBERON:0004819!5.39e-07!17;UBERON:0006553!5.39e-07!17;UBERON:0003074!5.39e-07!17;UBERON:0003060!5.39e-07!17;UBERON:0005177!6.90e-07!107;UBERON:0002113!9.85e-07!27;UBERON:0003918!9.85e-07!27;UBERON:0005095!9.85e-07!27;UBERON:0007687!9.85e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0007196;4.45e-11;15!UBERON:0001558;4.45e-11;15!UBERON:0005181;1.04e-09;35!UBERON:0005178;1.48e-09;34!UBERON:0002224;1.48e-09;34!UBERON:0002185;4.87e-09;5!UBERON:0000072;6.26e-08;37!UBERON:0002298;1.17e-07;6!UBERON:0003126;9.38e-07;7!UBERON:0001005;9.38e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007196,4.01e-11,15;UBERON:0001558,4.01e-11,15;UBERON:0005178,2.68e-10,34;UBERON:0002224,2.68e-10,34;UBERON:0005181,5.44e-10,35;UBERON:0002185,3.98e-09,5;UBERON:0002298,1.21e-07,6;UBERON:0007503,2.50e-07,78;UBERON:0000072,2.51e-07,47;UBERON:0005177,7.69e-07,101;UBERON:0005256,8.40e-07,122;UBERON:0003126,9.65e-07,7;UBERON:0001005,9.65e-07,7 | |||
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| ||
|short_description=p4@HOXB5 | |||
}} | }} |
Latest revision as of 07:15, 25 September 2015
Short description: | p4@HOXB5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_HOXB5_5end |
Coexpression cluster: | NA |
Association with transcript: | -51bp_to_NM_002147, uc002inr.2_5end |
EntrezGene: | HOXB5 |
HGNC: | 5116 |
UniProt: | P09067 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bronchial smooth muscle cell | 2.08e-21 | 2 |
smooth muscle cell of trachea | 2.31e-21 | 2 |
smooth muscle cell | 4.22e-08 | 43 |
smooth muscle myoblast | 4.22e-08 | 43 |
Ontology term | p-value | n |
---|---|---|
tracheobronchial tree | 4.01e-11 | 15 |
lower respiratory tract | 4.01e-11 | 15 |
thoracic cavity element | 2.68e-10 | 34 |
thoracic cavity | 2.68e-10 | 34 |
thoracic segment organ | 5.44e-10 | 35 |
bronchus | 3.98e-09 | 5 |
brainstem | 1.21e-07 | 6 |
epithelial vesicle | 2.50e-07 | 78 |
segment of respiratory tract | 2.51e-07 | 47 |
trunk region element | 7.69e-07 | 101 |
trunk mesenchyme | 8.40e-07 | 122 |
trachea | 9.65e-07 | 7 |
respiratory airway | 9.65e-07 | 7 |